Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0397
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    25   2.8  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    25   2.8  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    25   2.8  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    25   2.8  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    25   2.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.7  
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    24   3.7  
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    24   3.7  
AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse t...    24   5.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.7  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    23   8.7  

>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 358 GTSPQTEPAPQATPH 402
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 358 GTSPQTEPAPQATPH 402
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 358 GTSPQTEPAPQATPH 402
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 358 GTSPQTEPAPQATPH 402
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 358 GTSPQTEPAPQATPH 402
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 542 TVYQGYGENKLLARSAAAEQAVRDIIIKKI 631
           ++  GYGE   LA  A  + +V+  I+K I
Sbjct: 691 SIKSGYGEGAPLAIVAPEKNSVKSAIVKSI 720


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 93  KITHISLWRFYNTRVGPPIISTSKWILQYLMSRVMSPRMQPASDKTM 233
           +I+H+ L    + R+G P    + W+  YLM R  S RM P   +++
Sbjct: 78  RISHVILLAKLD-RLGLPDPLVA-WLRSYLMGRTYSVRMGPHLSRSL 122


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 93  KITHISLWRFYNTRVGPPIISTSKWILQYLMSRVMSPRMQPASDKTMHHF 242
           +I+H+ L    + R+G P    + W+  YLM R  S RM P   +++  F
Sbjct: 78  RISHVILLAKLD-RLGLPDPLVA-WLRSYLMGRTYSVRMGPHLSRSIPCF 125


>AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 93  KITHISLWRFYNTRVGPPIISTSKWILQYLMSRVMSPRMQP 215
           +I+H+ L    + R+G P    + W+  YLM R  S RM P
Sbjct: 78  RISHVILLAKLD-RLGLPDPLVA-WLRSYLMGRTYSVRMGP 116


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 SSATSRGSSDTAESISRLK 151
           SSA+S GSSD   S  +LK
Sbjct: 587 SSASSHGSSDGPSSSEKLK 605


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 358 GTSPQTEPAPQATPH 402
           G +P TEP P+ +P+
Sbjct: 80  GVTPNTEPVPKPSPN 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,914
Number of Sequences: 2352
Number of extensions: 14482
Number of successful extensions: 47
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)