Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0397
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016420-7|AAB65303.1| 428|Caenorhabditis elegans Serpentine re... 31 0.73
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 30 1.3
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 30 1.3
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 30 1.3
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 30 1.3
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 29 3.0
U70852-15|AAK29824.1| 543|Caenorhabditis elegans Hypothetical p... 29 3.9
Z75554-6|CAA99958.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosi... 28 5.2
AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosi... 28 5.2
AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosi... 28 5.2
AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical ... 28 5.2
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 28 6.8
U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical pr... 28 6.8
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 6.8
AL117206-10|CAB60452.2| 258|Caenorhabditis elegans Hypothetical... 28 6.8
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 6.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 6.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 6.8
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 9.1
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 9.1
>AF016420-7|AAB65303.1| 428|Caenorhabditis elegans Serpentine
receptor, class r protein8 protein.
Length = 428
Score = 31.1 bits (67), Expect = 0.73
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -2
Query: 298 LGASQFLFFDSLHTIRVKLKWCIVLSDAGCILGDITRLIRYCRIHFEVEMIGGP 137
LG +FL SL K K C V + C+LG + ++ RI F +E +G P
Sbjct: 61 LGPFRFLVKASLLDCSTKSKCCSVFT---CLLGVVMVVVTLIRISFLMEAVGAP 111
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 580
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 110 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 160
Query: 581 RSAAAEQAVRDI 616
+ +E VRD+
Sbjct: 161 KQKCSELVVRDL 172
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 580
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 110 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 160
Query: 581 RSAAAEQAVRDI 616
+ +E VRD+
Sbjct: 161 KQKCSELVVRDL 172
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 580
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 176 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 226
Query: 581 RSAAAEQAVRDI 616
+ +E VRD+
Sbjct: 227 KQKCSELVVRDL 238
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 580
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 110 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 160
Query: 581 RSAAAEQAVRDI 616
+ +E VRD+
Sbjct: 161 KQKCSELVVRDL 172
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 580
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 110 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 160
Query: 581 RSAAAEQAVRDI 616
+ +E VRD+
Sbjct: 161 KQKCSELVVRDL 172
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 580
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 176 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 226
Query: 581 RSAAAEQAVRDI 616
+ +E VRD+
Sbjct: 227 KQKCSELVVRDL 238
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 477 GSTLKLLAICSLGIISLITMTAFFGVRSRLRCWFCLRRRSLFVTF 343
G T K I S+G I L ++ F +R W C+ R L++ F
Sbjct: 5 GPTFK--TIFSIGAIVLWSIELFLAFAQSVRPWICILRTCLYIIF 47
>U70852-15|AAK29824.1| 543|Caenorhabditis elegans Hypothetical
protein F45E4.11 protein.
Length = 543
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 456 AICSLGIISLITMTAFFGVRSRLRCWFCLRRRSLFVTFFTPG 331
A+ S G+ I+ FF S FCL +F TPG
Sbjct: 383 AVASAGLAICISFVPFFNKESAFLAVFCLCGAMIFAGLHTPG 424
>Z75554-6|CAA99958.1| 304|Caenorhabditis elegans Hypothetical
protein ZC455.7 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 385 VLVLSAATFLVCHFLHSR*FTFHPRRQFFLGASQFLFFD 269
VL+ S AT L C + R TFHP Q + + F++FD
Sbjct: 11 VLIASIATIL-CLLIVGRSNTFHPNLQGPIWFTAFVYFD 48
>AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform b protein.
Length = 440
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 492 CLFGFGSTLKLLAICSLGIISLITMTAFFGV 400
C FG++L LL+ S G S IT T+F G+
Sbjct: 256 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 286
>AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform c protein.
Length = 408
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 492 CLFGFGSTLKLLAICSLGIISLITMTAFFGV 400
C FG++L LL+ S G S IT T+F G+
Sbjct: 256 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 286
>AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform a protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 492 CLFGFGSTLKLLAICSLGIISLITMTAFFGV 400
C FG++L LL+ S G S IT T+F G+
Sbjct: 241 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 271
>AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical
protein H23L24.4 protein.
Length = 368
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 502 LLEVLVRVWLHFEIIGNLLLRNHFVDHHDCILRREESPEVLVLSAATFLVCH 347
L+ +L+ L+F I+ N+ R DH + S +L+ F +CH
Sbjct: 217 LVPLLLLSVLNFRILSNISNRRVSFDHKSRFAQERRSVTLLISIVTMFFLCH 268
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 425 INEMIPKEQIANNFKVEPNPNKHFKQTTP 511
+ ++IP I N F NP H+K T P
Sbjct: 136 LRDVIPNAYILNQFGNPANPEAHYKTTGP 164
>U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical
protein K02E10.6 protein.
Length = 201
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 416 VMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDG 541
V++ ++ P+E N K EP P +F Q T + A DG
Sbjct: 8 VLLTVQVCPEENWLPNRKEEPRPVSYFSQRTRSLNAGYATDG 49
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTP 511
TPK V E +PKE I ++ K + +P+ K+ +P
Sbjct: 1350 TPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSP 1386
>AL117206-10|CAB60452.2| 258|Caenorhabditis elegans Hypothetical
protein Y67A10A.2 protein.
Length = 258
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 462 ISKWSQTRTSTSSK-RPPRTAQTSPL--TAPCTKDTVRTS 572
+++W++TRT TS P T +T+ + T PCT TV S
Sbjct: 114 VNQWTRTRTCTSKDFFCPCTGETTNIVYTCPCTAVTVINS 153
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTP 511
TPK V E +PKE I ++ K + +P+ K+ +P
Sbjct: 1350 TPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSP 1386
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTP 511
TPK V E +PKE I ++ K + +P+ K+ +P
Sbjct: 1350 TPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSP 1386
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 401 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTP 511
TPK V E +PKE I ++ K + +P+ K+ +P
Sbjct: 1350 TPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSP 1386
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 319 EK*TTGSEESDKQGTSPQTEPAPQATPHAEECSHGDQRNDS 441
EK + S++S P +P P+ATP + D +DS
Sbjct: 458 EKAASSSDDSSDDEKKPTAKPTPKATP-KQSAKKADSSDDS 497
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 319 EK*TTGSEESDKQGTSPQTEPAPQATPHAEECSHGDQRNDS 441
EK + S++S P +P P+ATP + D +DS
Sbjct: 733 EKAASSSDDSSDDEKKPTAKPTPKATP-KQSAKKADSSDDS 772
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,392,177
Number of Sequences: 27780
Number of extensions: 331973
Number of successful extensions: 1120
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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