Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0396
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.3  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 252 YIRFCVKVIVFLNKIINMSTQTRGRGHVYHSCNMLFFHSRLNSHL 118
           Y+  CVK ++ L   ++  ++  G   V HS + L   S +N H+
Sbjct: 363 YLERCVKEVLRLYPSVHFISRKLGEDLVTHSGHKLAKASIVNLHI 407


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 252 YIRFCVKVIVFLNKIINMSTQTRGRGHVYHSCNMLFFHSRLNSHL 118
           Y+  CVK ++ L   ++  ++  G   V HS + L   S +N H+
Sbjct: 363 YLERCVKEVLRLYPSVHFISRKLGEDLVTHSGHKLAKGSIVNLHI 407


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 318  NWLE-NYNIQIALRFETICIFTCE*NAKEIV 407
            NW    YNI   L F  +C FTC+ N + IV
Sbjct: 943  NWTSFYYNIIPILFFMLVC-FTCKSNIQLIV 972


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 318  NWLE-NYNIQIALRFETICIFTCE*NAKEIV 407
            NW    YNI   L F  +C FTC+ N + IV
Sbjct: 943  NWTSFYYNIIPILFFMLVC-FTCKSNIQLIV 972


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 318  NWLE-NYNIQIALRFETICIFTCE*NAKEIV 407
            NW    YNI   L F  +C FTC+ N + IV
Sbjct: 943  NWTSFYYNIIPILFFMLVC-FTCKSNIQLIV 972


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 318  NWLE-NYNIQIALRFETICIFTCE*NAKEIV 407
            NW    YNI   L F  +C FTC+ N + IV
Sbjct: 943  NWTSFYYNIIPILFFMLVC-FTCKSNIQLIV 972


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 FLCQTSFAFEYITNKELNWLENYNIQIALRFETICIFT 380
           ++CQT   FEY   K L  ++ Y     L F+ I I T
Sbjct: 198 YVCQTVSNFEYFQRKILLMIQLY----YLYFDVIVIST 231


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 FLCQTSFAFEYITNKELNWLENYNIQIALRFETICIFT 380
           ++CQT   FEY   K L  ++ Y     L F+ I I T
Sbjct: 124 YVCQTVSNFEYFQRKILLMIQLY----YLYFDVIVIST 157


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -1

Query: 697 FKINYSNIPASIINTSLKKERNVFTYGTFKDVYNRSTGCYHY 572
           ++I+    P+   N   +   N+ T  T+   YN+   C HY
Sbjct: 334 YQISAQPTPSQSPNQIYQPVTNL-TNLTYPSYYNQDVSCTHY 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,202
Number of Sequences: 336
Number of extensions: 3233
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)