Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0396
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.3  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   4.0  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    24   5.3  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 243 ILYRYLFFFLCQTSFAFEYITNKELNWL 326
           IL  Y+FF +    + F+Y+ N E +WL
Sbjct: 94  ILPDYIFFRMPPIYYLFDYVVN-EFSWL 120


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 371 HIYMRMKCERNRR 409
           H Y  M+C+RNRR
Sbjct: 79  HQYAEMRCQRNRR 91


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 215 IK*LIC--PRRLAAAVTYITHVTC 150
           +K L+C  P R+AAA   +T +TC
Sbjct: 275 VKCLLCGGPHRIAAASCAVTSMTC 298


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,517
Number of Sequences: 2352
Number of extensions: 12919
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)