Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0396
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    25   0.52 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   3.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   8.5  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 694 KINYSNIPASIINTSLKKERNVFTY 620
           K +YS +  S++N+ LK   NV+ Y
Sbjct: 21  KCSYSCVNKSMLNSHLKSHSNVYQY 45


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
 Frame = +3

Query: 258 LFFFLC----QTSFAFEYITNKELNW 323
           LF++LC    +  + FE   NKEL W
Sbjct: 782 LFWYLCAGHVRLPYTFEQFHNKELLW 807


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
 Frame = +3

Query: 258 LFFFLC----QTSFAFEYITNKELNW 323
           LF++LC    +  + FE   NKEL W
Sbjct: 820 LFWYLCAGHVRLPYTFEQFHNKELLW 845


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 505 YVLDAAILFDTQFTAQYINLIFSNDNNPWTCYR 603
           ++LD  IL + Q     I++   +DN   T YR
Sbjct: 135 WILDTGILGEKQICRPKIHVFSLHDNKLITMYR 167


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 493 LQTFPDHISRAHRRAGSRELNATSNLPTSTISFAFHSHVN 374
           ++TFP   S+  RRA    L+   N   S + +      N
Sbjct: 191 METFPSVYSKTRRRALEHTLDRFHNDKYSNVPYFLFGDFN 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,103
Number of Sequences: 438
Number of extensions: 3645
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)