Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0394
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 38 0.010
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 35 0.055
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 34 0.096
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 34 0.096
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 34 0.096
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 33 0.17
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 32 0.39
At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 32 0.51
At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 32 0.51
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 31 0.67
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 31 0.67
At1g54170.1 68414.m06175 ataxin-2-related similar to SCA2 (GI:17... 31 0.67
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 31 0.89
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 31 0.89
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 1.2
At1g22080.1 68414.m02761 hypothetical protein 31 1.2
At5g67600.1 68418.m08524 expressed protein 30 1.6
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 29 2.7
At1g47210.2 68414.m05226 cyclin family protein similar to A-type... 29 2.7
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 3.6
At3g59690.1 68416.m06660 calmodulin-binding family protein simil... 29 3.6
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 3.6
At2g20320.1 68415.m02373 DENN (AEX-3) domain-containing protein ... 29 3.6
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 29 4.7
At1g67140.1 68414.m07638 expressed protein 29 4.7
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 4.7
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik... 29 4.7
At5g02880.1 68418.m00231 HECT-domain-containing protein / ubiqui... 28 6.3
At4g21670.1 68417.m03139 double-stranded RNA-binding domain (DsR... 28 6.3
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 28 6.3
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 28 8.3
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 28 8.3
At3g62200.1 68416.m06988 expressed protein contains Pfam profile... 28 8.3
At3g04980.1 68416.m00541 DNAJ heat shock N-terminal domain-conta... 28 8.3
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQP-INTYPQ-NNYAPPQNSYYPQNTYAPPQNTY 338
PP Q+ P PP+ P I YP +Y PP Y PQ Y PP Y
Sbjct: 129 PPEQYSPPFKKYPPPEQYPPPIKKYPPPEHYPPPIKKYPPQEQYPPPIKKY 179
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQN-NYAPPQNSY------YPQNTYAPPQNTY 338
PP +W P+ ++ PPKP PI YP Y PP Y +P Y PP TY
Sbjct: 41 PPFKWGPKFPYS-PPKP-PPIEKYPPPVQYPPPIKKYPPPPYEHPPVKYPPPIKTY 94
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQP-INTYP-QNNYAPPQNSYYPQNTYAPPQNTY 338
PP Q+ P PP+ P I YP Q Y PP Y P Y PP Y
Sbjct: 142 PPEQYPPPIKKYPPPEHYPPPIKKYPPQEQYPPPIKKYPPPEKYPPPIKKY 192
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQP-INTY-PQNNYAPPQNSYYPQNTYAPPQNTY 338
PP Q+ P PP+ P I Y P Y+PP Y P Y PP Y
Sbjct: 103 PPEQYPPPIKKYPPPEQYPPPIKKYPPPEQYSPPFKKYPPPEQYPPPIKKY 153
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 192 PPIQ-WKPQNTWNAPPKPIQPINTYPQ--NNYAPPQNSYYPQNTYAPPQNTY 338
PPI+ + P + P K P YP Y PP Y P Y PP TY
Sbjct: 174 PPIKKYPPPEKYPPPIKKYPPPEQYPPPIKKYPPPIKKYPPPEEYPPPIKTY 225
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQ---PINTYPQ-NNYAPPQNSYYPQNTYAPPQNTY 338
PPI+ P PP P Q PI YP Y PP Y P Y+PP Y
Sbjct: 89 PPIKTYPHPPVKYPP-PEQYPPPIKKYPPPEQYPPPIKKYPPPEQYSPPFKKY 140
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 9/58 (15%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPP-KPIQPINTYPQ--------NNYAPPQNSYYPQNTYAPPQNTY 338
PPI+ P + PP K PI TYP Y PP Y P Y PP Y
Sbjct: 70 PPIKKYPPPPYEHPPVKYPPPIKTYPHPPVKYPPPEQYPPPIKKYPPPEQYPPPIKKY 127
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQ--NNYAPPQNSYYPQNTYAPPQ 329
PP+++ P + P K P YP Y PP+ P Y PP+
Sbjct: 97 PPVKYPPPEQYPPPIKKYPPPEQYPPPIKKYPPPEQYSPPFKKYPPPE 144
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 192 PPIQ-WKPQNTWNAPPKPIQPINTYPQ--NNYAPPQNSYYPQNTYAPPQNTY 338
PPI+ + PQ + P K P YP Y PP+ P Y PP Y
Sbjct: 161 PPIKKYPPQEQYPPPIKKYPPPEKYPPPIKKYPPPEQYPPPIKKYPPPIKKY 212
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYA-PPQNTY 338
PPI+ P PP P + P Y PP+ P Y PP+ Y
Sbjct: 220 PPIKTYPHPPVKYPPPPYKTYPHPPIKTYPPPKECPPPPEHYPWPPKKKY 269
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQP-INTYPQNNYAPPQNSYYPQNTYAPP 326
PP Q+ P PP+ P YP PP YP + PP
Sbjct: 116 PPEQYPPPIKKYPPPEQYSPPFKKYPPPEQYPPPIKKYPPPEHYPP 161
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 170 VRTFEPEPAYPVETSKYVERSTQADPADKHLSPKQLRPPSK 292
++ + P+ YP KY P K+ P+Q PP K
Sbjct: 163 IKKYPPQEQYPPPIKKYPPPEKYPPPIKKYPPPEQYPPPIK 203
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 170 VRTFEPEPAYPVETSKYVERSTQADPADKHLSPKQLRPPSK 292
++ + P YP KY + P K+ P+Q PP K
Sbjct: 111 IKKYPPPEQYPPPIKKYPPPEQYSPPFKKYPPPEQYPPPIK 151
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPP--KPIQPINTYPQN-NYAPPQNSY-YPQNTYAPP 326
PPI+ P PP K PI YP Y PP +Y +P Y PP
Sbjct: 187 PPIKKYPPPEQYPPPIKKYPPPIKKYPPPEEYPPPIKTYPHPPVKYPPP 235
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+Q P T++ P KP P+ P Y+PP P PP TY
Sbjct: 675 PPVQLPPTPTYSPPVKP-PPVQVPPTPTYSPPVK---PPPVQVPPTPTY 719
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PPIQ P T++ P P PI P Y+PP YP PP TY
Sbjct: 85 PPIQKPPTPTYSPPIYP-PPIQKPPTPTYSPP---IYPPPIQKPPTPTY 129
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+Q P T++ P KP P+ P Y+PP P PP TY
Sbjct: 658 PPVQKPPTPTYSPPVKP-PPVQLPPTPTYSPPVK---PPPVQVPPTPTY 702
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS---YYPQNTYAPP 326
PP+Q P T++ P KP PI P Y+PP P TY+PP
Sbjct: 489 PPVQKPPTPTYSPPVKP-PPIQKPPTPTYSPPIKPPPVKPPTPTYSPP 535
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS----YYPQNTYAPP 326
PP+Q P ++ P KP P++ P Y+PP S P TY+PP
Sbjct: 271 PPVQTPPTPIYSPPVKP-PPVHKPPTPTYSPPVKSPPVQKPPTPTYSPP 318
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P T++ P KP PI+ P Y+PP P + PP TY
Sbjct: 539 PPVHKPPTPTYSPPIKP-PPIHKPPTPTYSPP---IKPPPVHKPPTPTY 583
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PPI P T++ P KP P++ P Y+PP P + PP TY
Sbjct: 556 PPIHKPPTPTYSPPIKP-PPVHKPPTPTYSPP---IKPPPVHKPPTPTY 600
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PPIQ P T++ P P PI P Y+PP YP PP +Y
Sbjct: 102 PPIQKPPTPTYSPPIYP-PPIQKPPTPTYSPP---IYPPPIQKPPTPSY 146
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P T++ P KP P++ P Y+PP P + PP TY
Sbjct: 573 PPVHKPPTPTYSPPIKP-PPVHKPPTPTYSPP---IKPPPVHKPPTPTY 617
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P T++ P KP P++ P Y+PP P + PP TY
Sbjct: 590 PPVHKPPTPTYSPPIKP-PPVHKPPTPTYSPP---IKPPPVHKPPTPTY 634
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P T++ P KP P++ P Y+PP P + PP TY
Sbjct: 607 PPVHKPPTPTYSPPIKP-PPVHKPPTPTYSPP---IKPPPVHKPPTPTY 651
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY---PQNTYAPP 326
PP+Q P T++ P KP P++ P Y+PP P Y+PP
Sbjct: 153 PPVQMPPTPTYSPPIKP-PPVHKPPTPTYSPPIKPPVHKPPTPIYSPP 199
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 326
PPIQ P T++ P P PI P +Y+PP P TY+PP
Sbjct: 119 PPIQKPPTPTYSPPIYP-PPIQKPPTPSYSPPVKPPPVQMPPTPTYSPP 166
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P ++ P KP P+ T P Y+PP P + PP TY
Sbjct: 254 PPVHKPPTPIYSPPVKP-PPVQTPPTPIYSPPVK---PPPVHKPPTPTY 298
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 192 PPIQWKPQNTWNAP--PKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 326
PPIQ P T++ P P P++P PP P TY+PP
Sbjct: 506 PPIQKPPTPTYSPPIKPPPVKPPTPTYSPPIKPPPVHKPPTPTYSPP 552
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P T++ P KP P++ P Y+PP P PP TY
Sbjct: 624 PPVHKPPTPTYSPPIKP-PPVHKPPTPTYSPP---IKPPPVQKPPTPTY 668
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 326
PP+ P T++ P KP P+ P Y+PP P TY+PP
Sbjct: 641 PPVHKPPTPTYSPPIKP-PPVQKPPTPTYSPPVKPPPVQLPPTPTYSPP 688
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNT 335
PP+Q P T++ P KP P+ P Y+PP P PP T
Sbjct: 692 PPVQVPPTPTYSPPVKP-PPVQVPPTPTYSPP---IKPPPVQVPPTPT 735
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPPQNTY 338
PPI P + + PP PI YP PP S YP PP TY
Sbjct: 46 PPIYGAPPS-YTTPPPPIYSPPIYPPPIQKPPTYSPPIYPPPIQKPPTPTY 95
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS---YYPQNTYAPP 326
PP+Q P T++ P KP P+ P Y+PP P Y+PP
Sbjct: 305 PPVQKPPTPTYSPPIKP-PPVQKPPTPTYSPPIKPPPVKPPTPIYSPP 351
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P T++ P KP P++ P Y+PP P + PP Y
Sbjct: 220 PPVHKPPTPTYSPPVKP-PPVHKPPTPIYSPP---IKPPPVHKPPTPIY 264
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS---YYPQNTYAPP 326
PP+ P ++ P KP P++ P Y+PP P TY+PP
Sbjct: 439 PPVHKPPTPIYSPPVKP-PPVHKPPTPTYSPPIKPPPVKPPTPTYSPP 485
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 192 PPIQWKPQNTWNAP--PKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 326
PP+ P T++ P P P++P PP P TY+PP
Sbjct: 456 PPVHKPPTPTYSPPIKPPPVKPPTPTYSPPVQPPPVQKPPTPTYSPP 502
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP++ P T++ P KP P++ P Y+PP P + PP TY
Sbjct: 523 PPVK-PPTPTYSPPIKP-PPVHKPPTPTYSPP---IKPPPIHKPPTPTY 566
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P ++ P KP P++ P Y+PP P + PP TY
Sbjct: 186 PPVHKPPTPIYSPPIKP-PPVHKPPTPIYSPP---IKPPPVHKPPTPTY 230
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 326
PP+ P ++ P KP PI P Y+PP P TY+PP
Sbjct: 372 PPVHKPPTPIYSPPVKP-PPIQKPPTPTYSPPIKPPPLQKPPTPTYSPP 419
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P T++ PP P+ P Y+PP P PP TY
Sbjct: 288 PPVHKPPTPTYS-PPVKSPPVQKPPTPTYSPP---IKPPPVQKPPTPTY 332
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P ++ P KP P++ P Y+PP P + PP Y
Sbjct: 203 PPVHKPPTPIYSPPIKP-PPVHKPPTPTYSPPVK---PPPVHKPPTPIY 247
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 326
PP+ P ++ P KP P++ P Y+PP P TY+PP
Sbjct: 355 PPVHKPPTPIYSPPVKP-PPVHKPPTPIYSPPVKPPPIQKPPTPTYSPP 402
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 34.3 bits (75), Expect = 0.096
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = +3
Query: 195 PIQWKPQNTWNAPP-----KPIQPINTYPQNNYAPPQNSYYPQNTY 317
P + P +T PP P P + YP Y PPQ SYYPQ Y
Sbjct: 194 PSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPY-PPQPSYYPQGPY 238
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 234 PKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNT 335
P + YPQ + PP + Y PQ + PP +T
Sbjct: 169 PSLYPQVQQYPQPSGYPPASGYPPQPSAYPPPST 202
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +3
Query: 192 PPIQWKPQNTWNAP---PKPIQPINTYPQNNYAPPQNSY---YPQNTYAPPQ 329
PP + P + P P P P YP Y PPQ Y YP Y PPQ
Sbjct: 501 PPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYPAQGYPPPQ 552
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 195 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPP 326
P+ + P PP P+ YP Y+PP S YYPQ T +PP
Sbjct: 572 PVYYPPVTNSPPPPSPVY----YPPVTYSPPPPSPVYYPQVTPSPP 613
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 195 PIQWKPQNTWNAPPKPIQPINTYPQ--NNYAPPQNSYYPQNTYAPP 326
P+ + P PP P+ YP N+ PP YYP TY+PP
Sbjct: 557 PVYYPPVTQSPPPPSPVY----YPPVTNSPPPPSPVYYPPVTYSPP 598
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 195 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPPQNT 335
P+ + P PP P+ YP +PP S YYP T +PP T
Sbjct: 632 PVYYPPVTPSPPPPSPVY----YPPVTPSPPPPSPVYYPSETQSPPPPT 676
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 195 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPP 326
P+ + P PP P+ YPQ +PP S YYP T +PP
Sbjct: 587 PVYYPPVTYSPPPPSPVY----YPQVTPSPPPPSPLYYPPVTPSPP 628
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 326
PP+ + P T + PP P P+ P PP YYP T +PP
Sbjct: 664 PPVYYSPV-TQSPPPPP--PVYYPPVTQSPPPSPVYYPPVTQSPP 705
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPP 326
PP+ + P PP P+ YP +PP S YYP T +PP
Sbjct: 707 PPVYYLPVTQSPPPPSPVY----YPPVAKSPPPPSPVYYPPVTQSPP 749
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
PP+ P T +PP P P+ Y P YY + PP Y
Sbjct: 566 PPVVNCPPTT-QSPPPPKYEQTPSPREYYPSPSPPYYQYTSSPPPPTYY 613
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 195 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 326
P+ + P +PP P PI YP Y+PP YP Y+PP
Sbjct: 63 PVAFPPPPPIYSPPPP--PI--YPPPIYSPPPPPIYPPPIYSPP 102
>At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 199
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSY--YPQNTYAPP 326
PP Q P + + P P + YPQN PP ++Y YP Y PP
Sbjct: 151 PPQQGYPPSGYPQHPPQGYPPSGYPQN---PPPSAYSQYPPGAYPPP 194
>At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 255
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSY--YPQNTYAPP 326
PP Q P + + P P + YPQN PP ++Y YP Y PP
Sbjct: 207 PPQQGYPPSGYPQHPPQGYPPSGYPQN---PPPSAYSQYPPGAYPPP 250
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 192 PPIQ-WKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY-PQNTY-APPQNTYR 341
PP++ + P + +PP P++ + P PP YY P Y +PP Y+
Sbjct: 48 PPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPVYKSPPPPVYK 100
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 PPIQW-KPQNTWNAPPKPIQPINTYPQNNYAPP---QNSYYPQNTYAPP 326
PP+++ P + +PP P+ P +Y+PP ++ P Y+PP
Sbjct: 80 PPVKYYSPPPVYKSPPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPP 128
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 192 PPIQ-WKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY-PQNTY-APPQNTYR 341
PP++ + P + +PP P++ + P PP YY P Y +PP Y+
Sbjct: 48 PPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPVYKSPPPPVYK 100
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 PPIQW-KPQNTWNAPPKPIQPINTYPQNNYAPP---QNSYYPQNTYAPP 326
PP+++ P + +PP P+ P +Y+PP ++ P Y+PP
Sbjct: 80 PPVKYYSPPPVYKSPPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPP 128
>At1g54170.1 68414.m06175 ataxin-2-related similar to SCA2
(GI:1770390) [Homo sapiens]; similar to ataxin-2
(GI:3005020) [Mus musculus]
Length = 587
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -3
Query: 369 SDMKACSRWDDMCFEEEHMYSEDSMSFEGGRNCFGDKCLSAGSAWVERSTYFEVSTG 199
S + A +R+DD C+E++ ED + FGD S G ++E S G
Sbjct: 271 SSVCATNRFDDTCYEDDEEEEEDILLDCCNNLTFGDSSASDGKEPASTGKFYEDSWG 327
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = +3
Query: 231 PPKPIQPINTYPQNNYAPPQNSY----YPQNTYAPPQNTY 338
PP P YPQ Y PP +Y YP Y P Y
Sbjct: 22 PPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGY 61
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +3
Query: 210 PQNTWNAPPK-PIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 338
P + PP+ P YP Y PP + YP Y PP Y
Sbjct: 25 PPGAYPPPPQGAYPPPGGYPPQGYPPPPHG-YPPAAYPPPPGAY 67
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY-PQNTYAPP 326
PP+ P +PP P P+++ P ++PP Y P ++PP
Sbjct: 545 PPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPP 590
>At1g22080.1 68414.m02761 hypothetical protein
Length = 475
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 430 AXTNTSTKSXMEHT*ARXATSRIPTQKRQAW*KRAGTLTLELMAKFTP 573
A + S MEH+ AR + +++PT W + T+ L+A+ P
Sbjct: 404 AGETSDVASKMEHSDARYSVTKVPTSMDTLWAQVIATMPYHLVAQAVP 451
>At5g67600.1 68418.m08524 expressed protein
Length = 82
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 231 PPKPIQPINTYPQNNYAPPQNSY-YPQNTYAPPQ 329
PPK P YP Y PP + YP Y PPQ
Sbjct: 18 PPKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQ 51
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQN-NYAPPQNSYYPQNTYAPPQNTY 338
PP+ +KP + KP P Y ++ +Y+PP + P+ TY PP Y
Sbjct: 159 PPV-YKPTLSPPVYTKPTLPPPVYKKSPSYSPPP-PFAPKPTYTPPTKPY 206
>At1g47210.2 68414.m05226 cyclin family protein similar to A-type
cyclin [Catharanthus roseus] GI:2190259; contains Pfam
profile PF00134: Cyclin, N-terminal domain
Length = 372
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 558 HQLQCKSTSPFSPGLPLLCWD 496
H+ QC +T P SP LP+ W+
Sbjct: 348 HKFQCVATMPVSPELPVTFWE 368
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 326
PP +K + PP P Q +Y ++ PP + Y Y+PP
Sbjct: 195 PPPPYKYGRVYPPPPPPPQAARSYKRSPPPPPPSKY--GRVYSPP 237
>At3g59690.1 68416.m06660 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 517
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 210 PQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQNTYR 341
P + + PKPI P YPQ +Y P + P P+ R
Sbjct: 111 PSQRYVSSPKPISPRVAYPQVHYPKPPSPKPPSPRAVSPRIVQR 154
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNT 314
PP+ PQ + +AP P P T P N +PP + P NT
Sbjct: 75 PPL---PQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNT 112
>At2g20320.1 68415.m02373 DENN (AEX-3) domain-containing protein
contains Pfam domain PF02141: DENN (AEX-3) domain
Length = 976
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +2
Query: 254 KHL-SPKQLRPP-SKLILSSEYICSS-SKHISSHLEHA 358
+HL S RPP S L LS EYICSS SK I++ L A
Sbjct: 760 EHLQSISYTRPPVSALGLSEEYICSSDSKEINARLAAA 797
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPI--NTYPQN-NYAPPQNSYYPQN-TYAP 323
P I + P N +P P P N P + +Y+P SY P + TY+P
Sbjct: 1736 PSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 1783
>At1g67140.1 68414.m07638 expressed protein
Length = 2158
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 599 ASLVGPVVDGVNFAISSSVRVPALFHQACLFCVG 498
AS P DG NFA S + A+F ACL VG
Sbjct: 1627 ASSQKPYTDGTNFAADSGFHLRAIF-GACLHMVG 1659
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY-PQNTYAPP 326
PP + P +PP P P+ + P +++PP Y P T++PP
Sbjct: 596 PPPVFSPPPPVFSPPPP-SPVYSPPPPSHSPPPPVYSPPPPTFSPP 640
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPP-----KPIQPINTYPQNNYAPPQNSYYPQNTYAPP 326
PP+ P +++PP P P+ + P + PP +S P ++PP
Sbjct: 554 PPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPP 603
>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
protein, putative similar to cold-regulated gene SRC2
[Glycine max] GI:2055230; contains Pfam profile PF00168:
C2 domain; identical to cDNA src2-like protein
GI:3426059
Length = 324
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 204 WKPQNTWNAPPKPIQPINTYPQNNYAPPQNSY-YP-QNTYAPPQ 329
+ PQ P P Q YPQ Y PPQ Y YP Q + PQ
Sbjct: 230 YPPQQQGGYPGYPPQGPYGYPQQGY-PPQGPYGYPQQQAHGKPQ 272
>At5g02880.1 68418.m00231 HECT-domain-containing protein /
ubiquitin-transferase family protein /
armadillo/beta-catenin-like repeat-containing protein
similar to SP|Q14669 Thyroid receptor interacting
protein 12 (TRIP12) {Homo sapiens}; contains Pfam
profiles PF00632: HECT-domain (ubiquitin-transferase),
PF00514: Armadillo/beta-catenin-like repeat
Length = 1502
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 564 LCHQLQCKSTSPFSPGLPLLC 502
+C QL +S SPF +P+LC
Sbjct: 263 ICKQLSSESPSPFMDAVPILC 283
>At4g21670.1 68417.m03139 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 981
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +2
Query: 164 QLVRTFEPEPAYPVETSKYVERSTQADPADKHLSPKQLRPPSKLILSSEYICSSSKHISS 343
+++ + P +P SK ++ STQ+D + + RPP + + E + S++ S
Sbjct: 653 EMIHMEKHRPRHPSFFSK-IDNSTQSD----RMLHENRRPPKESLRRDEQLRSNNNLPDS 707
Query: 344 HLEHAFISDFDYNNSRSSD 400
H + + ++ ++SR+SD
Sbjct: 708 HPFYGEDASWNQSSSRNSD 726
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 192 PPIQWKPQNTWNAPPKPIQPINTYPQNNY-APPQNSYYPQNTYAPPQNTY 338
PP + P +PP P + P Y +PP Y P + PP +Y
Sbjct: 378 PPYTYSPPPYAYSPPPPCPDVYKPPPYVYSSPPPYVYNPPPSSPPPSPSY 427
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 LILIVAAFLAVTFADNVE-SDKEIEDSEAAESV 116
L++ + ++VTFADNVE K++E S+ + V
Sbjct: 12 LLVTLGVVISVTFADNVELKSKDLESSKKDKKV 44
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 249 PINTYPQNNYAPPQNSYYPQNTYAPP 326
P N YP + PP S YP N + PP
Sbjct: 223 PTNDYPAD-VPPPPPSSYPSNDHLPP 247
>At3g62200.1 68416.m06988 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 673
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = +3
Query: 207 KPQNTWNAPPKPIQP---INTYPQNNYAPPQN----SYYPQNTYAPPQNTY 338
+P + + PP P P +NT+P N PQN +Y P+ PP+ Y
Sbjct: 262 EPSVSTSRPPPPNLPSSNVNTFPGNVMTNPQNQNQYTYPPRPGPFPPRQPY 312
>At3g04980.1 68416.m00541 DNAJ heat shock N-terminal domain-containing
protein contains Pfam profile PF00226 DnaJ domain
Length = 1165
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 305 SEYICSSSKHISSHLEHAFISDFDYNNSRSSDQ-ERNVLW 421
S Y + H+S H + + FD+ N RS D+ E N +W
Sbjct: 937 STYKSPRTTHVSPHCKTPRRNAFDFQNLRSEDKFEVNQIW 976
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,549,677
Number of Sequences: 28952
Number of extensions: 319786
Number of successful extensions: 1334
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -