Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0390
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   6.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   6.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   6.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.1  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 159 VSLFFLIFVNEHENK 203
           V ++F IF+ EHE+K
Sbjct: 226 VLMYFDIFITEHESK 240


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 647 LSKLNNIMKH*SVYSLCPIKFYMR 576
           L KL  ++K   +  L P+KFY++
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQ 101


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 647 LSKLNNIMKH*SVYSLCPIKFYMR 576
           L KL  ++K   +  L P+KFY++
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQ 27


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 355 LLRYCSFLPIRCLQALKQYSFIYRAYILINKTYY 254
           LL YC F+       L  Y F Y A+I++   YY
Sbjct: 83  LLFYCPFIIFTVHFLLCTYYFYY-AFIILLCVYY 115


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 306 FRACRQRIGRKLQ*RNNVLRHT 371
           F    +R GRK+  R N ++HT
Sbjct: 334 FNIRARRTGRKVSPRVNTIKHT 355


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 306 FRACRQRIGRKLQ*RNNVLRHT 371
           F    +R GRK+  R N ++HT
Sbjct: 334 FNIRARRTGRKVSPRVNTIKHT 355


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 609 LFTMPNKILYERLAVY 562
           LFT+ NK+L+  LA Y
Sbjct: 298 LFTIDNKLLFGVLAYY 313


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 527 IHCYYFFALWEKYTANLSYKILLGIVNKHF 616
           +H YY  A    Y  N    I   I++KH+
Sbjct: 110 VHFYYPVATMSFYVLNFFGSIQFIIISKHW 139


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 429 INNTYIIVYVTLFRRANVCE 370
           +NN  ++ +V +FR   +CE
Sbjct: 223 LNNDVLLFFVKVFRPEPLCE 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,022
Number of Sequences: 336
Number of extensions: 3560
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)