Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0389
(507 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 170 2e-41
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 152 5e-36
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 143 2e-33
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 140 2e-32
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 138 9e-32
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 113 1e-31
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 128 7e-29
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 121 8e-27
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 113 3e-24
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 111 9e-24
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 109 3e-23
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 99 7e-20
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 85 9e-16
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 78 1e-13
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 77 3e-13
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 76 4e-13
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 63 4e-09
UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5; ... 56 5e-07
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 54 2e-06
UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1; Ostreoco... 52 6e-06
UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila melanogaster|... 49 5e-05
UniRef50_UPI0000D56A00 Cluster: PREDICTED: similar to CG11086-PA... 48 9e-05
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 48 9e-05
UniRef50_Q8SSK9 Cluster: 40S RIBOSOMAL PROTEIN S12; n=1; Encepha... 48 9e-05
UniRef50_A7T0U1 Cluster: Predicted protein; n=1; Nematostella ve... 47 2e-04
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 47 3e-04
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 46 7e-04
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 46 7e-04
UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible ... 45 0.001
UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n... 42 0.008
UniRef50_Q6NUV6 Cluster: Zgc:85869; n=5; Euteleostomi|Rep: Zgc:8... 42 0.011
UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=... 40 0.024
UniRef50_UPI000059FDC3 Cluster: PREDICTED: similar to growth arr... 40 0.032
UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein; ... 39 0.057
UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleu... 39 0.057
UniRef50_UPI00006CA9C7 Cluster: Ribosomal protein L7Ae containin... 39 0.075
UniRef50_A0UZZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 39 0.075
UniRef50_Q7QJT5 Cluster: ENSANGP00000021535; n=2; Culicidae|Rep:... 39 0.075
UniRef50_Q9U3Z7 Cluster: NHP2-like protein; n=71; Eukaryota|Rep:... 36 0.40
UniRef50_P32495 Cluster: H/ACA ribonucleoprotein complex subunit... 36 0.53
UniRef50_A4S6A0 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 36 0.70
UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=... 36 0.70
UniRef50_A5C1P4 Cluster: Putative uncharacterized protein; n=1; ... 35 0.92
UniRef50_A0DT75 Cluster: Chromosome undetermined scaffold_62, wh... 35 0.92
UniRef50_A5MZ72 Cluster: Transcriptional regulator; n=1; Clostri... 35 1.2
UniRef50_Q9XXD4 Cluster: Putative H/ACA ribonucleoprotein comple... 35 1.2
UniRef50_A0PXU0 Cluster: Ribosomal protein L7AE family, putative... 33 2.8
UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2; Dictyos... 33 2.8
UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containin... 33 3.7
UniRef50_Q9AW38 Cluster: SNU13 snRNP subunit homolog; n=1; Guill... 33 3.7
UniRef50_A6MZZ6 Cluster: H/ACA ribonucleoprotein complex subunit... 33 3.7
UniRef50_A3BQW6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_UPI0000F21D93 Cluster: PREDICTED: hypothetical protein;... 32 6.5
UniRef50_UPI0000DA2A79 Cluster: PREDICTED: similar to CG13731-PA... 32 6.5
UniRef50_UPI0000499ADF Cluster: 60S ribosomal protein L7a; n=3; ... 32 6.5
UniRef50_Q9LEY9 Cluster: H/ACA ribonucleoprotein complex subunit... 32 6.5
UniRef50_UPI000155BC7D Cluster: PREDICTED: similar to zonadhesin... 32 8.6
UniRef50_A3RPQ3 Cluster: Arginase; n=4; Ralstonia|Rep: Arginase ... 32 8.6
UniRef50_Q98RU4 Cluster: 60s ribosomal protein L7A; n=1; Guillar... 32 8.6
UniRef50_A7PGF5 Cluster: Chromosome chr17 scaffold_16, whole gen... 32 8.6
UniRef50_Q9P7H0 Cluster: H/ACA ribonucleoprotein complex subunit... 32 8.6
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 170 bits (413), Expect = 2e-41
Identities = 78/107 (72%), Positives = 89/107 (83%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 263
VN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NCDE Y KLV+AL EHQ
Sbjct: 14 VNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLVEALLAEHQ 73
Query: 264 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 404
I L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A
Sbjct: 74 INLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQA 120
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 152 bits (368), Expect = 5e-36
Identities = 64/101 (63%), Positives = 83/101 (82%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 275
L+EVLK A ++G L+HG+HE KAL+K+ VLCVLA NC+EA YKKLV LC E+ PL+
Sbjct: 20 LKEVLKNAQVNGSLLHGIHEGTKALEKKLGVLCVLANNCEEAMYKKLVTGLCAENSTPLI 79
Query: 276 KVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 398
+VD+NK LGEW+GLCK D +G+ARK+VGCSCVV+K FG++T
Sbjct: 80 EVDSNKTLGEWSGLCKYDNNGQARKVVGCSCVVVKHFGDDT 120
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 143 bits (347), Expect = 2e-33
Identities = 64/107 (59%), Positives = 84/107 (78%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 263
V+ AL+ ++ + +GG+V GLHE+AK ++KR A LCVLAE+C++ Y KLV+ALC +H
Sbjct: 27 VSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHS 86
Query: 264 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 404
I L+ V + K LGEWAGLCKID +G ARK+VGCSC+VIKDFGEET A
Sbjct: 87 IKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTA 133
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 140 bits (338), Expect = 2e-32
Identities = 61/109 (55%), Positives = 83/109 (76%)
Frame = +3
Query: 72 TTWXVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
T ++ A+Q+VLK A+ G+ GL++ K +++R VLC LA+NC+E AY L++ALC
Sbjct: 4 TEMDLDSAVQQVLKNAVKCRGICRGLNQCTKLIEQRGVVLCFLADNCNEKAYTTLIEALC 63
Query: 252 NEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 398
NEH IPLVKV +NKKLGEW+GLCK DK+GKARK+V SC+V+ D GEE+
Sbjct: 64 NEHGIPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCIVVTDIGEES 112
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 138 bits (333), Expect = 9e-32
Identities = 64/103 (62%), Positives = 79/103 (76%)
Frame = +3
Query: 90 VALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIP 269
VALQ+V+K +L G+ GLHE KALDKR A LCVLA NCDE + +LV+AL EH IP
Sbjct: 21 VALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPNFVRLVKALATEHNIP 80
Query: 270 LVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 398
L++V +NK LGEWAGLCK+DKD ARK+V CS +VIK FG+E+
Sbjct: 81 LIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIKTFGKES 123
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 113 bits (272), Expect(2) = 1e-31
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 272
AL+ VL+ ALIH GL GL EAAKALD+RQA +CVL E C+E AYKKLV ALC+EH+IPL
Sbjct: 35 ALKGVLRIALIHDGLARGLREAAKALDRRQAHMCVLNEGCEEEAYKKLVVALCSEHKIPL 94
Query: 273 VKVDNNKKLGEWAGLC 320
+KV + K LGEW GLC
Sbjct: 95 IKVPDGKMLGEWVGLC 110
Score = 45.2 bits (102), Expect(2) = 1e-31
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = +3
Query: 321 KIDKDGKARKIVGCSCVVIKDFGEET 398
++D++G ARK+V CSCVV+KD+GEE+
Sbjct: 144 QLDREGNARKVVNCSCVVVKDWGEES 169
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 128 bits (309), Expect = 7e-29
Identities = 67/120 (55%), Positives = 81/120 (67%), Gaps = 18/120 (15%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 272
ALQ V+K + H GLV GL EAAKA++K A LCVLAE+CD+ Y KLV+ALC EH + L
Sbjct: 24 ALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHL 83
Query: 273 VKVDNNKKLGEWAG------------------LCKIDKDGKARKIVGCSCVVIKDFGEET 398
V V + K LGEWAG LCKID +GKARK+VGCSCVV+KD+GEE+
Sbjct: 84 VTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKIDSEGKARKVVGCSCVVVKDYGEES 143
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 121 bits (292), Expect = 8e-27
Identities = 53/107 (49%), Positives = 78/107 (72%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 263
+ A++ VLK + + GGL+ GL+E ALD ++A +C LAE+C+E YK+LV+ALC E
Sbjct: 23 LTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQVCFLAESCEEDCYKQLVEALCRERG 82
Query: 264 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 404
IPL+ V ++K+LGE AGLCK+D++G RK+VG + V I D+G E+ A
Sbjct: 83 IPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAIVDYGVESEA 129
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 113 bits (271), Expect = 3e-24
Identities = 56/104 (53%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCN--EHQI 266
AL+ VL+TAL+H GL GL E+ KAL + +A+L VL + EA KLV+ L N E+++
Sbjct: 27 ALKVVLRTALVHDGLARGLRESTKALTRGEALLVVLVSSVTEANIIKLVEGLANDPENKV 86
Query: 267 PLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 398
PL+KV + K+LGEWAGL KID++G ARK+VG S VV+K++G ET
Sbjct: 87 PLIKVADAKQLGEWAGLGKIDREGNARKVVGASVVVVKNWGAET 130
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 111 bits (267), Expect = 9e-24
Identities = 50/103 (48%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 272
A+Q+V+K A +H GL G+ E K+++ ++A +C L++ C E AYKKL+ LC E IPL
Sbjct: 24 AIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFLSDVCSEPAYKKLITTLCAEKNIPL 83
Query: 273 VKVDNNKK-LGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 398
V N+ K LG WAGL K+D +G ARKI+G S V + DFGE++
Sbjct: 84 FMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAVVDFGEDS 126
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 109 bits (263), Expect = 3e-23
Identities = 51/104 (49%), Positives = 70/104 (67%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 272
AL+ VL A GL+ GL E +ALD+R A LCVLA++C++ YKKLV AL ++ I L
Sbjct: 32 ALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNIDL 91
Query: 273 VKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 404
V +D +KL +WAGL ++ DG RK + CSC+ ++DFGE T A
Sbjct: 92 VSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVRDFGERTKA 135
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 98.7 bits (235), Expect = 7e-20
Identities = 45/103 (43%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 275
LQ +L A+ +G L+ G+H+ KA++ + A CV++ E AY KL++ALC EH +P +
Sbjct: 51 LQRLLHLAMANGCLLRGIHQVTKAIEAKNARACVVSTQTSEEAYLKLIRALCKEHGVPCI 110
Query: 276 KVD-NNKKLGEWAGLCKIDKDGKARKIVGCSCVVI-KDFGEET 398
+ + +++K+GEWAGLCK D +G ARKIVG + V I +F E++
Sbjct: 111 ETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAITNNFDEKS 153
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 85.0 bits (201), Expect = 9e-16
Identities = 43/100 (43%), Positives = 59/100 (59%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 275
L+ V++T+L G L G+HE KA++ +QA VLA++C E YKKL+ AL + QIP+
Sbjct: 14 LKRVVQTSLHRGLLAKGVHEVCKAIESKQAKFVVLADDCTEDTYKKLIVALAKQFQIPVW 73
Query: 276 KVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 395
KV+ LGEW G+ K K K CS V +K F E
Sbjct: 74 KVEKGALLGEWIGISKFLTKTKKIKSRKCSSVALKHFAIE 113
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 78.2 bits (184), Expect = 1e-13
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 263
+N L +V+K++ + GLHE + ++ +QA+ +AE+CD+ Y KLV+ALC +++
Sbjct: 8 LNEVLAKVIKSSNCQDAISKGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNE 67
Query: 264 IPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 395
I V V LGE+ G + G+ +K+ GCS + I+ + E
Sbjct: 68 IKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSSLAIRKYAPE 111
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 76.6 bits (180), Expect = 3e-13
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGG-LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEH 260
+N L +VL A H G LV + A A L NC+E Y KLV+A C EH
Sbjct: 14 INTDLGDVLTYAPSHDGKLVQDTNTAKLPRPSTSAKLS-FPVNCNEPMYVKLVKAHCAEH 72
Query: 261 QIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 404
QI L+K D+ + L EW + D++GK+ K+V C+ VV+K +G+E+ A
Sbjct: 73 QISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSVVVKGYGKESQA 120
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 76.2 bits (179), Expect = 4e-13
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 275
++ +L A L G+ + K ++ ++A+ C +AE+CD Y L++A+C E + +V
Sbjct: 26 IKAILYQARAQNALTKGIRQCLKVIEAKKALYCFIAEDCDNDKYTGLLKAICKEQGVKIV 85
Query: 276 KVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 377
V +LGEW CKI +DG A +I CSC ++
Sbjct: 86 MVPQKIQLGEWTNQCKI-RDGAAVRIAKCSCAIV 118
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 62.9 bits (146), Expect = 4e-09
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 275
L+E K GLV G + K L++++A +C LA +C+E Y +V+ LC E+++ L
Sbjct: 10 LKETFKRIHNMDGLVTGHRQVFKYLERKRAKICFLASDCEEKQYADIVECLCKEYKVHLC 69
Query: 276 KVDNNKKLGEWAG--LCKIDKDGKARKIVGCSCVVIKDF 386
K + LGE G C D D K K+V S VI +F
Sbjct: 70 KKFTRRTLGELTGQVRCLADSD-KIIKVVPASACVIHNF 107
>UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L7Ae,
putative - Trichomonas vaginalis G3
Length = 127
Score = 56.0 bits (129), Expect = 5e-07
Identities = 29/102 (28%), Positives = 49/102 (48%)
Frame = +3
Query: 87 NVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQI 266
N ++ L + G + G+ KA+ K + L +LA++ + YK LV LC +H +
Sbjct: 9 NQVIEAGLHQINLSGTVAKGIKCTIKAILKDKVQLVLLADDTENKDYKNLVAGLCKKHNV 68
Query: 267 PLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGE 392
L V+ + LG GL + DG R+ + C I +G+
Sbjct: 69 KLQAVEKKELLGRALGLTHLKADGSVRRQMNCGACAIIGYGK 110
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/97 (28%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 275
L+ ++K A +V G+ E K + + C+LA+NC++ YK ++ LC +++ +
Sbjct: 7 LKILIKEATKKNLIVKGIKETIKFIIRGYGYACILAKNCNKKQYKIAIKTLCWIYKVKIF 66
Query: 276 KVDNNKKLGEWAGLCKIDKDGK-ARKIVGCS-CVVIK 380
+++ KKLG + K K K + KI+ CS C++++
Sbjct: 67 IINDKKKLGRLCKILKRKKSTKHSFKIIPCSVCLILR 103
>UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 473
Score = 52.4 bits (120), Expect = 6e-06
Identities = 36/115 (31%), Positives = 59/115 (51%)
Frame = -2
Query: 440 ARRLEVVXEHIQRWSFLAEIFDDNTGAADNFPCLAILVNLAETSPFSKLFVVVNLDKWNL 261
AR L+ V +H +R FL E+ D + A N A V LA+TSP ++ + + ++ ++
Sbjct: 296 ARVLQEVLKHAERRGFLTEVADHDARALHNLTRGAFGVELAQTSPLTERHRLRDANQVHV 355
Query: 260 MFVAQSLNKFLVCSFITVLSQNT*YCLPLVKSFSGFVKTVHKTTVD*SCL*HLLQ 96
FVAQ L++ V S + +L Q+ L + + +T +T S L H LQ
Sbjct: 356 DFVAQRLDELGVISLVAILRQDADQSLAGLDRLARLAQTAVQTVARASLLQHNLQ 410
>UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila
melanogaster|Rep: RH29995p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDK 176
+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 37 INTALQEVLKKSLIADGLIHGIHQACKALDK 67
>UniRef50_UPI0000D56A00 Cluster: PREDICTED: similar to CG11086-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG11086-PA - Tribolium castaneum
Length = 153
Score = 48.4 bits (110), Expect = 9e-05
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDK--RQAVLCVLAENC--DEAAYKK--LVQALCN 254
ALQ VL A G L+ GL A L+ +LCVL + D + + L+QA C
Sbjct: 23 ALQGVLTQAKTEGRLICGLLPAISCLENSLEDVLLCVLPQTRPGDATTHMQTVLLQAFCF 82
Query: 255 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 377
E+ IP+++VD+++KL ++ GL G VGC C VI
Sbjct: 83 ENYIPVIQVDSSEKLAQYCGL------GSR---VGCPCAVI 114
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 48.4 bits (110), Expect = 9e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3
Query: 153 EAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVD 284
++AKA++ +QA VLA++C E YKKLV AL + QIP+ KV+
Sbjct: 52 KSAKAIESKQAKFIVLADDCSEDTYKKLVIALAKQFQIPVWKVE 95
>UniRef50_Q8SSK9 Cluster: 40S RIBOSOMAL PROTEIN S12; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S12
- Encephalitozoon cuniculi
Length = 134
Score = 48.4 bits (110), Expect = 9e-05
Identities = 30/102 (29%), Positives = 49/102 (48%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 272
AL +V K + + L G E K + + ++AEN E KLV AL + IP+
Sbjct: 18 ALSKVCKVSRTYCKLSRGAKETTKKMLADKMSFVMVAENA-EPRISKLVMALAKKKNIPV 76
Query: 273 VKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 398
+ + + +LG G+ + GK R GC ++D+ E+T
Sbjct: 77 ISIGSCLELGRIVGVENVSSSGKVRS-KGCCVAGVQDYCEQT 117
>UniRef50_A7T0U1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 148
Score = 47.2 bits (107), Expect = 2e-04
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAEN--CDEA--AYKKLVQA 245
+ + L++VL +A L+ H AA+ L D LCVL EN D + +L++A
Sbjct: 25 LQLCLEDVLNSARECNELIMTTHGAAEQLEMDPDDVTLCVLVENRHADPGIQVHCRLIEA 84
Query: 246 LCNEHQIPLVKVDNNKKLGEWAG 314
C E+ IP+VKVD+++KL AG
Sbjct: 85 FCWEYPIPVVKVDSSRKLKTIAG 107
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 102 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKV 281
E ++ A G + G +E KA+++ QA L ++AE+ + LC+E +IP V V
Sbjct: 21 EAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYV 80
Query: 282 DNNKKLGEWAGL 317
+ K LGE GL
Sbjct: 81 SSKKALGEACGL 92
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 45.6 bits (103), Expect = 7e-04
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 305
L+HG++E KA++++QA L V+A + + + ALC + IP V V + +LG+
Sbjct: 135 LIHGINEVVKAVERKQASLVVIAHDVEPIELVLFLPALCKKLDIPYVIVKSKSRLGQ 191
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 45.6 bits (103), Expect = 7e-04
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +3
Query: 102 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKV 281
E+L A G + G +E KA+++ A L ++AE+ D + LC E ++P V V
Sbjct: 36 EILSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYV 95
Query: 282 DNNKKLGEWAGL 317
+ +KLG+ AG+
Sbjct: 96 PSKEKLGKAAGI 107
>UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible
protein GADD45 alpha; n=72; Euteleostomi|Rep: Growth
arrest and DNA-damage-inducible protein GADD45 alpha -
Homo sapiens (Human)
Length = 165
Score = 44.8 bits (101), Expect = 0.001
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYKKLV 239
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 240 QALCNEHQIPLVKVDNNKKLGE 305
QA C E+ I +++V N +L E
Sbjct: 79 QAFCCENDINILRVSNPGRLAE 100
>UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n=7;
Firmicutes|Rep: Putative ribosomal protein L7Ae-like -
Bacillus halodurans
Length = 82
Score = 41.9 bits (94), Expect = 0.008
Identities = 21/61 (34%), Positives = 38/61 (62%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 314
LV G + KAL++ + + V+A++ + K V+A+ + QIP++ VD+ KKLG+ G
Sbjct: 12 LVIGTKQTLKALEQEEVLEVVIAKDAEPRVVNK-VEAMASVKQIPIIYVDSMKKLGKACG 70
Query: 315 L 317
+
Sbjct: 71 I 71
>UniRef50_Q6NUV6 Cluster: Zgc:85869; n=5; Euteleostomi|Rep:
Zgc:85869 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 155
Score = 41.5 bits (93), Expect = 0.011
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAEN----CDEAA--YKKLVQAL 248
AL+EVL +A + L G++E+AK + D CVLA + CD A + L+QA
Sbjct: 22 ALEEVLVSAKANDSLTIGVYESAKVMNVDPDSVSFCVLAVDEEFECDIALQIHFTLIQAF 81
Query: 249 CNEHQIPLVKVDNNKKLGEWAG 314
C ++ I +V+V++ ++L + G
Sbjct: 82 CFDNDISIVRVNDMQRLSDIVG 103
>UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L7a,
putative - Leishmania major
Length = 264
Score = 40.3 bits (90), Expect = 0.024
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 314
+V GL E +A++K+QA + V+A N D + LC ++IP V + +LG+ G
Sbjct: 133 VVTGLQEVTRAIEKKQARMVVIANNVDPVELVLWMPNLCRANKIPYAIVKDMARLGDAIG 192
>UniRef50_UPI000059FDC3 Cluster: PREDICTED: similar to growth arrest
and DNA-damage-inducible, gamma; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to growth arrest and
DNA-damage-inducible, gamma - Canis familiaris
Length = 189
Score = 39.9 bits (89), Expect = 0.032
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YKKLVQAL 248
AL E+L +A G L G++E+AK L D CVLA + ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAADAEDEGDIALQIHFTLIQAF 84
Query: 249 CNEHQIPLVKVDNNKKLGEWAG 314
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein;
n=2; Clostridia|Rep: Ribosomal protein L7ae family
protein - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 87
Score = 39.1 bits (87), Expect = 0.057
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +3
Query: 144 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCK 323
G + KAL K +A+ +A + ++ +V ALC E +P+ VD +LG+ G+
Sbjct: 15 GTKQTLKALQKGKAIKVFIALDAEKRVTDPVV-ALCKEKNVPVETVDTMAELGKSCGIA- 72
Query: 324 IDKDGKARKIVGCSCVVIKDFGEE 395
VGC+C I D G+E
Sbjct: 73 ----------VGCACAAIIDPGKE 86
>UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleus
barkhanus|Rep: Ribosomal protein L7A - Spironucleus
barkhanus
Length = 228
Score = 39.1 bits (87), Expect = 0.057
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 314
++ G++E ++K++A L ++A + D + +LC++ QIP + + +LG AG
Sbjct: 110 VISGINEVTNLIEKKKAKLVLIANDVDPIELVMWLPSLCHKMQIPYAIIRSKSELGALAG 169
Query: 315 L 317
L
Sbjct: 170 L 170
>UniRef50_UPI00006CA9C7 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 161
Score = 38.7 bits (86), Expect = 0.075
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 263
+ V + ++++ A+ + L G++E K L+K + L +LA +CD + C E
Sbjct: 51 LTVKILDLIQQAMHYKQLKKGVNEVLKCLNKGVSELVILAADCDPLEIVMNLPGECEEKN 110
Query: 264 IPLVKVDNNKKLGEWAGL 317
+P V + LG G+
Sbjct: 111 VPYCFVSSKSALGRACGI 128
>UniRef50_A0UZZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Clostridium cellulolyticum H10|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Clostridium
cellulolyticum H10
Length = 80
Score = 38.7 bits (86), Expect = 0.075
Identities = 15/58 (25%), Positives = 35/58 (60%)
Frame = +3
Query: 144 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGL 317
G+ ++ KA++ A ++A +C++ + +++ LC +P+ VD+ K+LG+ G+
Sbjct: 13 GVKQSTKAVENGVASSVIIARDCEQRVVRGIIE-LCENKSVPITYVDSMKQLGKACGI 69
>UniRef50_Q7QJT5 Cluster: ENSANGP00000021535; n=2; Culicidae|Rep:
ENSANGP00000021535 - Anopheles gambiae str. PEST
Length = 135
Score = 38.7 bits (86), Expect = 0.075
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDK--RQAVLCVLAENCDEA--AYKKLVQALC 251
+ ++ L A + GL E+ AL K + C LA + + A ++ L++A C
Sbjct: 5 IGATVRRALVAASREDRAIVGLSESINALSKTPEDFLFCFLAASGNPANHMHQVLLEAFC 64
Query: 252 NEHQIPLVKVDNNKKLGEWAGLCKID 329
EH I ++KVD+ +KL G +++
Sbjct: 65 FEHDIYIIKVDSAEKLSRMLGTPRVE 90
>UniRef50_Q9U3Z7 Cluster: NHP2-like protein; n=71; Eukaryota|Rep:
NHP2-like protein - Drosophila melanogaster (Fruit fly)
Length = 127
Score = 36.3 bits (80), Expect = 0.40
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 275
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 276 KVDNNKKLGEWAGLCK 323
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>UniRef50_P32495 Cluster: H/ACA ribonucleoprotein complex subunit 2;
n=4; Saccharomycetales|Rep: H/ACA ribonucleoprotein
complex subunit 2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 156
Score = 35.9 bits (79), Expect = 0.53
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 263
+N + + +K A + G+ E KAL K + L V+A + A + LC +H
Sbjct: 39 LNKKVLKTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHS 98
Query: 264 IPLVKVDNNKKLGEWAGLCK 323
+P + + + + LG AG K
Sbjct: 99 VPYIFIPSKQDLGA-AGATK 117
>UniRef50_A4S6A0 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 171
Score = 35.5 bits (78), Expect = 0.70
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +3
Query: 102 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKV 281
+V+K A + G+ E KAL K +CV+A + V LC E +P V V
Sbjct: 57 KVVKKAAKAKQVRRGVKEVVKALKKETKGVCVIAGDISPIDVITHVPILCEEAGVPYVYV 116
Query: 282 DNNKKLGEWAGLCK 323
+ ++LG AG+ K
Sbjct: 117 HSKEELGA-AGMTK 129
>UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=4;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L7a,
putative - Trichomonas vaginalis G3
Length = 244
Score = 35.5 bits (78), Expect = 0.70
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 314
LV G+ A++ ++A L ++A + D + ALC +IP V + +LG+ G
Sbjct: 122 LVQGIKNVTAAVESKKAQLVIIAHDVDPIELVIWLPALCRNLEIPYCIVKSKSRLGQIVG 181
Query: 315 L 317
+
Sbjct: 182 M 182
>UniRef50_A5C1P4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 545
Score = 35.1 bits (77), Expect = 0.92
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +3
Query: 63 CRVTTWXVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQ 242
CR++ + LQ + AL G+V GLH +++ QA L V+A+ D + +
Sbjct: 269 CRLSPVGYQIQLQCLFLNAL--RGVVDGLHHITYYIEQNQAQLAVIAQEVDPIEFAVWLS 326
Query: 243 ALCNEHQI 266
LC + ++
Sbjct: 327 VLCQKIEV 334
>UniRef50_A0DT75 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_62,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 274
Score = 35.1 bits (77), Expect = 0.92
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 87 NVALQEV-LKTALIHGGLVHGLHEAAKALDK--RQAVLCVLAENCDEAAYKKLVQALCNE 257
NVA++ V + T HGGLV LHE K K + E+ + Y +V CN+
Sbjct: 41 NVAIKAVAMSTFKNHGGLVGQLHETEKQNMKLVNSNYVVRFIEDFQQNKYSYIVMEYCNQ 100
Query: 258 HQIPLVKVDNNKKLGE 305
I +D NK E
Sbjct: 101 GDIEKPWLDQNKHFSE 116
>UniRef50_A5MZ72 Cluster: Transcriptional regulator; n=1;
Clostridium kluyveri DSM 555|Rep: Transcriptional
regulator - Clostridium kluyveri DSM 555
Length = 316
Score = 34.7 bits (76), Expect = 1.2
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Frame = +3
Query: 27 LMLKSRSPPTPSCRVTTWXVNVALQEVLKTALIHGGLVHGL--HEAAKALDKRQAVLCVL 200
L+L S P+PS +++ + ++++V K I L+ L H K L +
Sbjct: 191 LLLIFSSLPSPSFKISPYF---SMEQVQKVKHIRQHLIKSLDRHITLKELAAEHQISLTS 247
Query: 201 AENCDEAAYKKLVQALCNEHQIPL---VKVDNNKKLGEWAGLCKIDKDGK 341
+NC +A Y K + A C E+++ + D + + AG+ + GK
Sbjct: 248 LKNCFKAIYGKTIYAFCREYRMQTAAEIIKDTPLPITQIAGMVGYENPGK 297
>UniRef50_Q9XXD4 Cluster: Putative H/ACA ribonucleoprotein complex
subunit 2-like protein; n=3; Chromadorea|Rep: Putative
H/ACA ribonucleoprotein complex subunit 2-like protein -
Caenorhabditis elegans
Length = 163
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 302
L G+ + K L + + +C+LA N + +C E +IP V + + ++LG
Sbjct: 69 LREGIKDVQKELRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLG 124
>UniRef50_A0PXU0 Cluster: Ribosomal protein L7AE family, putative;
n=1; Clostridium novyi NT|Rep: Ribosomal protein L7AE
family, putative - Clostridium novyi (strain NT)
Length = 80
Score = 33.5 bits (73), Expect = 2.8
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 123 IHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 302
I G V GL + K + + +A+N D +VQ L +P++ +D KKLG
Sbjct: 5 IQGEKVIGLKQTMKYIQNDKGKCLYVAKNADGKLTDPVVQ-LATNRLLPIIYIDTMKKLG 63
Query: 303 EWAGL 317
+ G+
Sbjct: 64 MFCGI 68
>UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L7a
- Dictyostelium discoideum AX4
Length = 285
Score = 33.5 bits (73), Expect = 2.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 144 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 305
G+ K ++K++A L V+A + D + LC +P V + +LGE
Sbjct: 158 GIDSVTKLIEKKKAKLVVIAHDVDPVELVLYLPTLCRRMDVPYCIVKSKSRLGE 211
>UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 286
Score = 33.1 bits (72), Expect = 3.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKL 299
L +GL+ ++ +QA L V+A + D + LC ++ +P V N++L
Sbjct: 224 LKYGLNHITTLIENKQAKLVVIAHDVDPIELVIFLPQLCRKNDVPFAFVKGNRQL 278
>UniRef50_Q9AW38 Cluster: SNU13 snRNP subunit homolog; n=1;
Guillardia theta|Rep: SNU13 snRNP subunit homolog -
Guillardia theta (Cryptomonas phi)
Length = 125
Score = 33.1 bits (72), Expect = 3.7
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 263
+ V + ++++ A + G +EA K + K + L VLA + D + LC +
Sbjct: 15 LTVQILDLIEIASSFKLIKKGANEAVKNIKKGKVELLVLASDSDPIEIVLHLPLLCEDRS 74
Query: 264 IPLVKVDNNKKLGEWAGL 317
IP + +++ +G+ G+
Sbjct: 75 IPYIFINSKISIGKACGI 92
>UniRef50_A6MZZ6 Cluster: H/ACA ribonucleoprotein complex subunit 2;
n=4; Oryza sativa|Rep: H/ACA ribonucleoprotein complex
subunit 2 - Oryza sativa subsp. indica (Rice)
Length = 126
Score = 33.1 bits (72), Expect = 3.7
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 314
L G+ E K++ + Q LC++A N V LC E IP V V + + L AG
Sbjct: 21 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AG 79
Query: 315 LCK 323
K
Sbjct: 80 TTK 82
>UniRef50_A3BQW6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 160
Score = 33.1 bits (72), Expect = 3.7
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +3
Query: 21 PWLMLKSRSPPTPSCRVTTWXVNVALQEV----LKTALIHGGLV--HGLHEAAKAL 170
PWL +PPTP+ V+ + N++ Q + A HGG+V HG E A AL
Sbjct: 29 PWLRSTPSAPPTPTLAVSIFRANLSSQPLPFFQAVEARPHGGVVGAHGHGEGAAAL 84
>UniRef50_UPI0000F21D93 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 218
Score = 32.3 bits (70), Expect = 6.5
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = -1
Query: 369 HRSSRQFSLPCHPCQSCRDQPILQAFCCCQP*QVESDVRCTEPEQVSCMQLHHSSQPKHI 190
H SS LPC P SC +P A C S C P ++ M S+QP
Sbjct: 37 HLSSASAPLPCLPQLSCTSRP-SSALCSASHQACFSSASCPGPPRLGSMPRPTSAQPHAQ 95
Query: 189 VLLASCQEL 163
L+S L
Sbjct: 96 AHLSSTPRL 104
>UniRef50_UPI0000DA2A79 Cluster: PREDICTED: similar to CG13731-PA;
n=1; Rattus norvegicus|Rep: PREDICTED: similar to
CG13731-PA - Rattus norvegicus
Length = 285
Score = 32.3 bits (70), Expect = 6.5
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = -1
Query: 342 PCHPCQSCRDQPILQAFCCCQP*QVESDVRCTEPEQVSCMQLHHSSQPKHIVLLASCQ 169
P H C C P+ C P + + ++CT P +C+Q +S + + + CQ
Sbjct: 196 PIHTCLQCTPPPVHTRLQCTLP-PIHTCLQCTLPPVHTCLQYTPASSARLLPVHTCCQ 252
>UniRef50_UPI0000499ADF Cluster: 60S ribosomal protein L7a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L7a - Entamoeba histolytica HM-1:IMSS
Length = 286
Score = 32.3 bits (70), Expect = 6.5
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 305
L +G++ + ++++QA L V+A + + + LC + Q+P V +LG+
Sbjct: 129 LSYGINNVVRLIERKQAKLVVIAHDVEPLEMVVYLPYLCKKLQVPYCIVKGKARLGQ 185
>UniRef50_Q9LEY9 Cluster: H/ACA ribonucleoprotein complex subunit
2-like protein; n=4; Magnoliophyta|Rep: H/ACA
ribonucleoprotein complex subunit 2-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 156
Score = 32.3 bits (70), Expect = 6.5
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 314
L G+ E K++ + Q LCV+A N + LC E +P V V + + L + AG
Sbjct: 51 LKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQ-AG 109
Query: 315 LCK 323
K
Sbjct: 110 ATK 112
>UniRef50_UPI000155BC7D Cluster: PREDICTED: similar to zonadhesin,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to zonadhesin, partial - Ornithorhynchus anatinus
Length = 1553
Score = 31.9 bits (69), Expect = 8.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 300 QAFCCCQP*QVESDVRCTEPEQVSCMQLHHSSQPKHIVLLASCQEL*R-LREDRAQ 136
Q C C P V S RC C + H +P ++ +C E+ + L ++R Q
Sbjct: 1027 QPGCACDPGYVVSGSRCVSVSSCGCSRGGHYYKPGEVIFSETCDEMCQCLGDNRTQ 1082
>UniRef50_A3RPQ3 Cluster: Arginase; n=4; Ralstonia|Rep: Arginase -
Ralstonia solanacearum UW551
Length = 309
Score = 31.9 bits (69), Expect = 8.6
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL--AENCDEAAYKKLVQALCNEHQI 266
ALQ L+T HGGLVH + A R A L L A ++ EH
Sbjct: 32 ALQR-LRTPDTHGGLVHDIELTTPAGHSRSARLAALPGVAGFSRALADATAHSVHEEHVP 90
Query: 267 PLVKVDNNKKLGEWAGL 317
++ D++ +G W+G+
Sbjct: 91 VVIGGDHSCAIGTWSGV 107
>UniRef50_Q98RU4 Cluster: 60s ribosomal protein L7A; n=1; Guillardia
theta|Rep: 60s ribosomal protein L7A - Guillardia theta
(Cryptomonas phi)
Length = 206
Score = 31.9 bits (69), Expect = 8.6
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 314
+ HG+++ + K++ + ++A + + +LC+ +IP V V + +LG G
Sbjct: 116 IAHGINKITNMIKKKKLIFVIIANDVSPIECIVWLPSLCDYMKIPYVIVKDKSRLGRIVG 175
Query: 315 L 317
+
Sbjct: 176 M 176
>UniRef50_A7PGF5 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 661
Score = 31.9 bits (69), Expect = 8.6
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 51 PTPSCRVTTWXVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYK 230
P P + + LQ + AL G+V GLH +++ QA L V+A+ D +
Sbjct: 13 PCPDAFLQVPGYQIQLQCLFLNAL--RGVVDGLHHITYYIEQNQAQLAVIAQEVDPIEFV 70
Query: 231 KLVQALCNEHQI 266
+ LC + ++
Sbjct: 71 VWLLVLCQKMEV 82
>UniRef50_Q9P7H0 Cluster: H/ACA ribonucleoprotein complex subunit 2;
n=7; Fungi/Metazoa group|Rep: H/ACA ribonucleoprotein
complex subunit 2 - Schizosaccharomyces pombe (Fission
yeast)
Length = 154
Score = 31.9 bits (69), Expect = 8.6
Identities = 17/74 (22%), Positives = 35/74 (47%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 263
+N + + +K A ++ G+ E KA+ K + L +LA + + LC ++
Sbjct: 37 LNKKMMKTVKKASKQKHILRGVKEVVKAVRKGEKGLVILAGDISPMDVISHIPVLCEDNN 96
Query: 264 IPLVKVDNNKKLGE 305
+P + + + LGE
Sbjct: 97 VPYLYTVSKELLGE 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,272,019
Number of Sequences: 1657284
Number of extensions: 8522954
Number of successful extensions: 25983
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 25274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25967
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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