Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0388
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0537 + 3860277-3860286,3860464-3860576,3861729-3861799,386... 176 2e-44
06_01_0527 + 3822051-3822318,3822408-3822520,3823673-3823743,382... 176 2e-44
10_07_0105 + 12922828-12923448,12923554-12923907,12924008-129243... 149 3e-36
10_07_0106 - 12933918-12934041,12934164-12934486,12934584-129349... 147 6e-36
10_07_0109 + 12952293-12952952,12953049-12953402,12953494-129538... 145 3e-35
03_03_0129 - 14684003-14684123,14684205-14684323,14684406-146845... 144 8e-35
06_01_0963 + 7411944-7412396,7412677-7412736,7412828-7413010,741... 118 4e-27
10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397 107 6e-24
09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591 40 0.002
06_02_0276 + 13678457-13678734,13679592-13679931,13680025-136802... 33 0.29
05_01_0491 + 4093952-4094145,4094336-4094642,4094700-4094799,409... 33 0.29
09_03_0003 + 11396076-11396386,11398803-11398869,11399194-113996... 31 0.88
01_01_0485 - 3576989-3577173,3577476-3577795,3577895-3578178,357... 29 2.7
04_04_0192 - 23471346-23471572,23473004-23473195,23474342-234744... 29 4.7
04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999... 28 6.2
08_02_0582 + 18993816-18993890,18994050-18994446,18995645-189957... 28 8.2
05_01_0347 - 2717275-2717613,2717994-2718077,2718185-2718247,271... 28 8.2
04_04_0264 + 24035282-24035686,24036877-24037118,24037230-240377... 28 8.2
01_01_0452 - 3357687-3358332,3358779-3359641 28 8.2
>06_01_0537 +
3860277-3860286,3860464-3860576,3861729-3861799,
3861887-3861978,3862080-3862167,3862264-3862375,
3862503-3862599,3862710-3862791,3863153-3863273,
3863459-3863566,3863717-3863819,3863996-3864171
Length = 390
Score = 176 bits (428), Expect = 2e-44
Identities = 85/200 (42%), Positives = 132/200 (66%), Gaps = 1/200 (0%)
Frame = +3
Query: 21 LLNHGDHIVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTNIEKVKNAMQENTKMIWIETP 200
LL G IV+ +D+YGG++RLL QV R GI D T I +V +A+ TK++W+E+P
Sbjct: 92 LLKSGQEIVAGEDIYGGSDRLLSQVAPRHGIVVKRIDTTKISEVTSAIGPLTKLVWLESP 151
Query: 201 TNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLTKYMNGHSD 380
TNP L++ DI+ I +IA G +V+VDN+ ++P L +PL+ GADIVM+S TK++ GHSD
Sbjct: 152 TNPRLQITDIKKIAEIAHYHG-ALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSD 210
Query: 381 VIMG-AAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKKSSLIIAN 557
++ G A+ + ++ ++ FLQNA G +P DC+ R +KT+ALR+E + ++ IA
Sbjct: 211 LMAGILAVKGESSLAKEIAFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQANAQKIAE 270
Query: 558 WLEKHPKIVEVLHPXLXTHP 617
+L HP++ +V + L HP
Sbjct: 271 FLASHPRVKKVNYAGLPDHP 290
>06_01_0527 +
3822051-3822318,3822408-3822520,3823673-3823743,
3823831-3823922,3824024-3824111,3824208-3824319,
3824447-3824543,3824654-3824735,3825097-3825217,
3825403-3825510,3825661-3825763,3825940-3826115
Length = 476
Score = 176 bits (428), Expect = 2e-44
Identities = 85/200 (42%), Positives = 132/200 (66%), Gaps = 1/200 (0%)
Frame = +3
Query: 21 LLNHGDHIVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTNIEKVKNAMQENTKMIWIETP 200
LL G IV+ +D+YGG++RLL QV R GI D T I +V +A+ TK++W+E+P
Sbjct: 178 LLKSGQEIVAGEDIYGGSDRLLSQVAPRHGIVVKRIDTTKISEVTSAIGPLTKLVWLESP 237
Query: 201 TNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLTKYMNGHSD 380
TNP L++ DI+ I +IA G +V+VDN+ ++P L +PL+ GADIVM+S TK++ GHSD
Sbjct: 238 TNPRLQITDIKKIAEIAHYHG-ALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSD 296
Query: 381 VIMG-AAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKKSSLIIAN 557
++ G A+ + ++ ++ FLQNA G +P DC+ R +KT+ALR+E + ++ IA
Sbjct: 297 LMAGILAVKGESSLAKEIAFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQANAQKIAE 356
Query: 558 WLEKHPKIVEVLHPXLXTHP 617
+L HP++ +V + L HP
Sbjct: 357 FLASHPRVKKVNYAGLPDHP 376
>10_07_0105 +
12922828-12923448,12923554-12923907,12924008-12924330,
12928324-12928401,12928760-12928883
Length = 499
Score = 149 bits (360), Expect = 3e-36
Identities = 78/205 (38%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 9 TLVALLNHGDHIVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTN-IEKVKNAMQEN-TKM 182
TL+AL+ G H+V++ D Y +R +S +GI +TF D + +E +++ + E M
Sbjct: 172 TLLALVPPGGHVVATADCYSEARAFIRDKLSNMGITSTFVDLDDDMEALESVLDEGEVTM 231
Query: 183 IWIETPTNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLTKY 362
+ ++ TNP LKVVD+ + ++ RG +V +D+T +P QKPL GAD+V++S TKY
Sbjct: 232 FYADSMTNPHLKVVDVTRVAELCHRRG-ALVCIDSTLASPINQKPLALGADVVLHSATKY 290
Query: 363 MNGHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKKSS 542
+ GH DVI G + +A+ ++R + +G SP Y + R LKTLALR++ +++
Sbjct: 291 IAGHHDVIAGC-VSGSEALVSRIRTWHHDLGGAISPNAAYMIIRGLKTLALRVQAQNRTA 349
Query: 543 LIIANWLEKHPKIVEVLHPXLXTHP 617
L +A LEKHPKI V +P L + P
Sbjct: 350 LRMAQLLEKHPKIERVYYPGLESSP 374
>10_07_0106 -
12933918-12934041,12934164-12934486,12934584-12934937,
12935029-12935646
Length = 472
Score = 147 bits (357), Expect = 6e-36
Identities = 78/205 (38%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 9 TLVALLNHGDHIVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTN-IEKVKNAMQEN-TKM 182
TL+AL+ G H+V + D Y + +S++GI +TF D + +E +++ + E+ M
Sbjct: 171 TLLALVPPGGHVVVTADCYSEARAFIHDKLSKMGITSTFVDLDDDMEALESVLDEDEVTM 230
Query: 183 IWIETPTNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLTKY 362
+ ++ TNP LKVVD+ + ++ RG +V +D+T +P QKPL GAD+V++S TKY
Sbjct: 231 FYADSMTNPHLKVVDVARVAELCHRRG-ALVCIDSTLASPINQKPLALGADVVLHSATKY 289
Query: 363 MNGHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKKSS 542
+ GH DVI G + +A+ ++R + +G SP Y + R LKTLALR+E +++
Sbjct: 290 IAGHHDVIAGC-VSGSEALISRIRAWHHDLGGAISPNAAYMIIRGLKTLALRVEAQNRTA 348
Query: 543 LIIANWLEKHPKIVEVLHPXLXTHP 617
L +A LEKHPKI V +P L + P
Sbjct: 349 LRMARLLEKHPKIERVYYPGLESSP 373
>10_07_0109 +
12952293-12952952,12953049-12953402,12953494-12953816,
12953939-12954062
Length = 486
Score = 145 bits (351), Expect = 3e-35
Identities = 77/201 (38%), Positives = 122/201 (60%), Gaps = 2/201 (0%)
Frame = +3
Query: 9 TLVALLNHGDHIVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTN-IEKVKNAMQEN-TKM 182
TL+AL+ G H+V++ D Y +R +S +GI +TF D + +E ++ + E+ M
Sbjct: 185 TLLALVPPGGHVVATADCYSEARAFIRDKLSNMGITSTFVDLDDDMEALECVLDESEVTM 244
Query: 183 IWIETPTNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLTKY 362
+ ++ TNP LKVVD+ + ++ RG +V +D+T +P QKPL GAD+V++S TKY
Sbjct: 245 FYADSMTNPHLKVVDVTRVAELCHRRG-ALVCIDSTLASPINQKPLALGADVVLHSATKY 303
Query: 363 MNGHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKKSS 542
+ GH DVI G + +A+ ++R + +G SP Y + R LKT+ALR+E +++
Sbjct: 304 IAGHHDVIAGC-VSGSEALISRIRAWHHDLGGAISPNAAYMIIRGLKTIALRVEAQNRTA 362
Query: 543 LIIANWLEKHPKIVEVLHPXL 605
L +A LEKHPKI V +P L
Sbjct: 363 LRMARLLEKHPKIERVYYPGL 383
>03_03_0129 -
14684003-14684123,14684205-14684323,14684406-14684501,
14684605-14684712,14684974-14685060,14685135-14685338,
14685429-14685488,14686096-14686264,14686400-14686473,
14686586-14686897,14687054-14687212
Length = 502
Score = 144 bits (348), Expect = 8e-35
Identities = 74/210 (35%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
Frame = +3
Query: 12 LVALLNHGDHIVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTNIEKVKNAMQENT-KMIW 188
L AL+ G H+V++ D Y T + + + GI T +++ ++NA+ N + +
Sbjct: 204 LSALVPAGGHVVTTTDCYRKTRIYMETELPKRGITMTVIRPADMDALQNALDNNNVSLFF 263
Query: 189 IETPTNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLTKYMN 368
ETPTNP L+ +DI+ + K+ S+G ++ + D+TF +P QK L GAD+V++S TKY+
Sbjct: 264 TETPTNPFLRCIDIDLVSKMCHSKGALLCI-DSTFASPINQKALTLGADLVIHSATKYIA 322
Query: 369 GHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKKSSLI 548
GH+DVI G D+ + K+R + +G V +P Y + R +KTL LR++ +++
Sbjct: 323 GHNDVIGGCISGRDELVS-KVRIYHHVVGGVLNPNAAYLILRGMKTLHLRVQCQNNTAMR 381
Query: 549 IANWLEKHPKIVEVLHPXLXTHPHTXXLKN 638
+A +LE+HPKI V +P L +HP K+
Sbjct: 382 MAQFLEEHPKIARVYYPGLPSHPEHHIAKS 411
>06_01_0963 +
7411944-7412396,7412677-7412736,7412828-7413010,
7413259-7413339,7414219-7414541,7414961-7415084
Length = 407
Score = 118 bits (284), Expect = 4e-27
Identities = 68/204 (33%), Positives = 113/204 (55%), Gaps = 1/204 (0%)
Frame = +3
Query: 9 TLVALLNHGDHIVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTNIEKVKNAM-QENTKMI 185
TL+A++ G H+V++ D Y +R +S++GI TTF D ++E +++ + Q N M
Sbjct: 116 TLLAVVPPGGHVVATTDCYSEARAFIRDRLSKMGIRTTFVDLDDMEALQSVLDQGNVTMF 175
Query: 186 WIETPTNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLTKYM 365
+ ++ TNP LK VD+ + ++ RG +V +D+T +P QKPL GAD+V++S + +
Sbjct: 176 YADSLTNPHLKCVDVRRVAELCHQRG-ALVCIDSTLASPINQKPLTLGADVVLHSHHQVI 234
Query: 366 NGHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKKSSL 545
+ V D G + FL P Y + R LKT+ALR+E +++L
Sbjct: 235 GAGWETPW----VTDFTTGMGVGFLNW------HPNAAYMIIRGLKTMALRVEAQNRTAL 284
Query: 546 IIANWLEKHPKIVEVLHPXLXTHP 617
+A LE+HPK+ V +P L + P
Sbjct: 285 RVARLLERHPKVERVNYPWLESSP 308
>10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397
Length = 469
Score = 107 bits (258), Expect = 6e-24
Identities = 64/211 (30%), Positives = 119/211 (56%), Gaps = 5/211 (2%)
Frame = +3
Query: 3 TTTLVALLNHGDHIVSSDDVYGGTNRLLRQVVSRL-GINTTFTDFTNIEKVKNAMQEN-T 176
++ L+ L+ G H+V+S +YGGT+ LL + + R G+ TF D + V+ A++ T
Sbjct: 134 SSVLMQLVGAGGHVVASRCLYGGTHALLSRFLPRASGVRATFVDADDEAAVRAAVRPGET 193
Query: 177 KMIWIETPTNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLT 356
+++++ET +NP L V DI + ++A G +VV DNTF TP + P GAD+V++S++
Sbjct: 194 RVVYVETMSNPTLAVADIPMLARVAHDAGAKLVV-DNTF-TPMVVSPARLGADVVVHSVS 251
Query: 357 KYMNGHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPID---CYFVNRSLKTLALRMEH 527
K+++G +D+I GA + + + A+ ++ ++ + ++ L L LRM+
Sbjct: 252 KFISGGADIIAGAICGPASLVNAMMDLQEGALMLLGPTMNAKVAFELSERLPHLPLRMQE 311
Query: 528 HKKSSLIIANWLEKHPKIVEVLHPXLXTHPH 620
H + + A+ + + + V +P L HPH
Sbjct: 312 HSRRAAEYASRMRRLG--LRVAYPGLPDHPH 340
>09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591
Length = 455
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +3
Query: 9 TLVALLNHGDHIVSSDDVYGGTNRLLRQVVSRL-GINTTFTDFT-NIEKVKNAMQENTKM 182
T++ L+N GD ++ Y L + + I DF+ +E++K A+ +NT+
Sbjct: 172 TILGLINPGDEVILFAPFYDSYEATLSMAGANVKAITLRPPDFSVPLEELKAAVSKNTRA 231
Query: 183 IWIETPTNPLLKVVDIEAIVKIAR--SRGDIIVVVDNTF 293
I I TP NP K+ E + IA D+++ D +
Sbjct: 232 IMINTPHNPTGKMFTREELEFIATLCKENDVLLFADEVY 270
>06_02_0276 +
13678457-13678734,13679592-13679931,13680025-13680243,
13680328-13680420
Length = 309
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 138 NIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKIA--RSRGDIIVVVDNTF 293
N+E V+ ENT I I P NP V E + KIA S+ ++V+ D +
Sbjct: 171 NVEAVEALADENTVAIVITNPNNPCGNVYTYEHLSKIADTASKFGLLVIADEVY 224
>05_01_0491 +
4093952-4094145,4094336-4094642,4094700-4094799,
4094823-4094953,4095546-4095823,4095909-4096225,
4096322-4096506
Length = 503
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +3
Query: 261 GDIIVVVDNTFLTPYLQKPLDFGA-DIVMYSLTKYMNGHSDVIMGAAIVNDKAIGDKL-R 434
GD + V D + P A DI++++++K GH+ +G A+V D+A+ K+ +
Sbjct: 294 GDGVAVHDLAYYWPQYTPITSAAAHDIMLFTVSK-CTGHAGTRLGWALVKDRAVAQKMSK 352
Query: 435 FLQ-NAMGI 458
F++ N +G+
Sbjct: 353 FIELNTIGV 361
>09_03_0003 +
11396076-11396386,11398803-11398869,11399194-11399698,
11400903-11401038,11401186-11401257,11401891-11401923,
11401924-11402047,11402387-11402437,11403437-11403563,
11404230-11404298,11404369-11404486,11404755-11405151
Length = 669
Score = 31.1 bits (67), Expect = 0.88
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = -1
Query: 421 PIALSFTIAAPIMTSE*PFIYFVS-EYITMSAPKSKGFCKY--GVKKVLSTTTIMSPRLL 251
P+ S+TI T E Y+V Y P+ + F Y G + I P LL
Sbjct: 182 PLNFSWTIPTSWPTIEAVPAYYVDVHYTEFQKPQGREFNTYYNGALWPANENPITPPYLL 241
Query: 250 AIFTIASMSTTFNNGFVGVSI 188
A +T ++ T +NGF + +
Sbjct: 242 ADYTFSTSQYTSDNGFYNICL 262
>01_01_0485 -
3576989-3577173,3577476-3577795,3577895-3578178,
3579780-3580095,3580441-3580859
Length = 507
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/44 (34%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +3
Query: 333 DIVMYSLTKYMNGHSDVIMGAAIVNDKAIGDKL-RFLQ-NAMGI 458
DI++++++K GH+ +G A+V D+AI K+ +F++ N +G+
Sbjct: 322 DIMLFTVSK-STGHAGTRIGWALVKDRAIARKMTKFVELNTIGV 364
>04_04_0192 -
23471346-23471572,23473004-23473195,23474342-23474418,
23475810-23475850,23475928-23475974,23476108-23476194,
23476807-23477011,23477747-23477866
Length = 331
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +2
Query: 299 AVFTKAFRFRSGHRYVLANEIYEWSF*RHNGSRYCK*QSYRRQTKILAKRHG---HRSVT 469
A + ++ H Y+L N I W+F + R+ +T + ++G H ++T
Sbjct: 137 AAISAVLAWKYSHAYILTNRILPWAF--YASLRFL--MKLNNETVTIELKNGTVVHGTIT 192
Query: 470 DRLLFCEQELKDVSIKNGASQEVVIDHCQLVG 565
+ LK V + V +DH + G
Sbjct: 193 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRG 224
>04_03_0037 -
9991176-9991268,9991403-9991474,9991569-9991928,
9992466-9992555,9992692-9992782,9993530-9993729,
9998024-9998101,9998196-9998312,10000017-10000112,
10000192-10000317,10000533-10000629,10000979-10001023,
10002106-10002179,10002267-10002350,10002439-10002522,
10002660-10002851,10003775-10003903,10004061-10004093,
10004190-10004286,10004833-10004883,10005211-10005289,
10005480-10005552,10005595-10005691,10006392-10006473,
10008345-10008691,10010271-10010535,10010624-10010743,
10010971-10011358
Length = 1219
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 251 EESRRHYRCCRQYLLDAVFTKAFRFRSGHRYVLANE 358
E + RHYRC + +A FR+ H YV N+
Sbjct: 191 EHNNRHYRCQNGWTSEAWNKVVKEFRNRHPYVTMNK 226
>08_02_0582 +
18993816-18993890,18994050-18994446,18995645-18995748,
18995863-18996004,18996118-18996237,18996341-18996465,
18996903-18997061,18997161-18997323,18997420-18997545,
18997628-18997711,18997761-18998173,18998199-18998273,
18998463-18998663,18998862-18998971,18999072-18999156,
18999365-18999493,18999596-18999701,18999825-18999913,
19000064-19000366
Length = 1001
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -1
Query: 253 LAIFTIASMSTTFNNGFVGVSIQIILVFSCMAFFTFSIFVKSVNVV 116
L IF + S S F F+ +++QI+L F +FF+ VKS +V+
Sbjct: 430 LDIFRLNSYSIQFVFYFLYINLQIVLAFLLASFFS---SVKSASVI 472
>05_01_0347 -
2717275-2717613,2717994-2718077,2718185-2718247,
2718350-2718488,2719118-2719219,2719324-2719424,
2719915-2719981,2720074-2720120,2720246-2720440,
2720523-2720569,2721242-2721339,2722219-2722337,
2722438-2722611
Length = 524
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = -1
Query: 421 PIALSFTIAAPIMTSE*PFIYFVSEYITMSAPKSKGFCKYGVKKVLSTTTIMSPRL-LAI 245
PIALS TI +M F++ +S +S +++ + + ++ +M + +A+
Sbjct: 321 PIALSATILGLVMVGRAAFVFPLSFLSNLSKKETRPKISFKQQVIIWWAGLMRGAVSIAL 380
Query: 244 ----FTIASMSTTFNNGFVGVSIQIILVFSCMAFFTFSIFVKSVNVVLIP 107
FT + + N + S I+++FS M F F K + +LIP
Sbjct: 381 AYHKFTASGHTELRINAIMITSTVIVVLFSTM---VFGFFTKPLLNLLIP 427
>04_04_0264 +
24035282-24035686,24036877-24037118,24037230-24037750,
24038262-24038746
Length = 550
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 162 MQENTKMIWIETPTNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTP 302
M+E+ + + P L ++D+ V A +R +I+V++DN TP
Sbjct: 111 MRESVAGVRVNNPGLLDLPLIDVFQEVVSALARNNIMVILDNQMTTP 157
>01_01_0452 - 3357687-3358332,3358779-3359641
Length = 502
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -2
Query: 93 LALIVCLYRRIHHLRTRC--DLRDSAEQPK 10
LA +VC+Y H LR RC LR PK
Sbjct: 139 LAFLVCIYEAPHALRCRCLESLRTQLTGPK 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,788,436
Number of Sequences: 37544
Number of extensions: 307896
Number of successful extensions: 922
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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