Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0388
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 248 3e-66
U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical p... 233 7e-62
Z81467-4|CAB03873.2| 451|Caenorhabditis elegans Hypothetical pr... 137 8e-33
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 33 0.26
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 31 1.0
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z78542-10|CAB01751.2| 428|Caenorhabditis elegans Hypothetical p... 30 1.8
AL031620-6|CAA20929.2| 428|Caenorhabditis elegans Hypothetical ... 30 1.8
Z81056-2|CAB02901.2| 323|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 29 4.2
U51995-4|AAA96072.2| 317|Caenorhabditis elegans F-box a protein... 28 5.6
Z78417-2|CAB01692.1| 258|Caenorhabditis elegans Hypothetical pr... 27 9.8
U64847-8|AAQ91904.1| 558|Caenorhabditis elegans Acyltransferase... 27 9.8
U64847-7|AAB04876.1| 718|Caenorhabditis elegans Acyltransferase... 27 9.8
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 27 9.8
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 27 9.8
U55371-2|AAL02524.1| 402|Caenorhabditis elegans Hypothetical pr... 27 9.8
U55371-1|AAL02525.1| 432|Caenorhabditis elegans Hypothetical pr... 27 9.8
AY919615-1|AAY16564.1| 432|Caenorhabditis elegans FLP-2 recepto... 27 9.8
AY919614-1|AAY16563.1| 402|Caenorhabditis elegans FLP-2 recepto... 27 9.8
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 248 bits (607), Expect = 3e-66
Identities = 116/214 (54%), Positives = 159/214 (74%), Gaps = 3/214 (1%)
Frame = +3
Query: 3 TTTLVALLNHGDHIVSSDDVYGGTNRLLRQV-VSRLGINTTFTDFTNIEKVKNAMQENTK 179
++ ++ LLNHGDHIV SDDVYGGT R +RQ+ V + G+ D T+++ ++ A++ NTK
Sbjct: 83 SSAVINLLNHGDHIVCSDDVYGGTIRYIRQIAVKKYGMEVDSVDLTDVQNLEKAIKPNTK 142
Query: 180 MIWIETPTNPLLKVVDIEAIVKIA-RSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYSLT 356
M+W E+P+NPLLKVVDI A+V+ A R+ +I+VVVDNTF+TPY Q+PL GADI ++S+T
Sbjct: 143 MVWFESPSNPLLKVVDIAAVVQTAKRANPEIVVVVDNTFMTPYFQRPLSLGADIAVHSIT 202
Query: 357 KYMNGHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKK 536
KY+NGHSD+IMGAAI N+ L F+Q A+G VPSP DC+ VNR LKTL +RM+ H +
Sbjct: 203 KYINGHSDIIMGAAITNNDEFQQHLHFMQRAIGGVPSPFDCFLVNRGLKTLHVRMKAHFE 262
Query: 537 SSLIIANWLEKHPKIVEVLHPXLXTHP-HTXXLK 635
++L IA +LE H I VL+P L +HP HT +K
Sbjct: 263 NALAIAKFLEAHDCIESVLYPALPSHPQHTVHVK 296
>U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical
protein ZK1127.10 protein.
Length = 392
Score = 233 bits (571), Expect = 7e-62
Identities = 105/207 (50%), Positives = 152/207 (73%), Gaps = 2/207 (0%)
Frame = +3
Query: 3 TTTLVALLNHGDHIVSSDDVYGGTNRLLRQV-VSRLGINTTFTDFTNIEKVKNAMQENTK 179
T+ ++ LL +GDHIV SDDVYGGT R +R+V V G+ D T+++ ++ A++ NTK
Sbjct: 83 TSAIINLLKYGDHIVCSDDVYGGTQRYIRRVAVPNHGLEVDSVDLTDVQNLEKAIKPNTK 142
Query: 180 MIWIETPTNPLLKVVDIEAIVKIARSRG-DIIVVVDNTFLTPYLQKPLDFGADIVMYSLT 356
M+W E+P+NPLLKVVDI A+V+ A+ +I+VVVDNTF++PY Q+P+ GAD+V++S+T
Sbjct: 143 MVWFESPSNPLLKVVDIAAVVQTAKKANPEIVVVVDNTFMSPYFQRPISLGADVVVHSIT 202
Query: 357 KYMNGHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHHKK 536
KY+NGHSDV+MGA I ++ L F+Q A+G VPSP DC+ VNR LKTL +RM H +
Sbjct: 203 KYINGHSDVVMGAVITDNDEFQQHLFFMQLAVGAVPSPFDCFLVNRGLKTLHIRMRAHYE 262
Query: 537 SSLIIANWLEKHPKIVEVLHPXLXTHP 617
++L +A +LE + +I VL+P L +HP
Sbjct: 263 NALAVAKYLEANDRIESVLYPALPSHP 289
>Z81467-4|CAB03873.2| 451|Caenorhabditis elegans Hypothetical
protein C12C8.2a protein.
Length = 451
Score = 137 bits (331), Expect = 8e-33
Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
Frame = +3
Query: 3 TTTLVALLNHGDHIVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTNIEK----VKNAMQE 170
+ + L+ G H++ + +Y GT+ + + ++R G+ T D + V+ A++
Sbjct: 146 SAVFLEFLSSGAHMIVMNPIYSGTSSFINETLARFGVEITSVDVEKEKDFAGAVEKAIRP 205
Query: 171 NTKMIWIETPTNPLLKVVDIEAIVKIARSRGDIIVVVDNTFLTPYLQKPLDFGADIVMYS 350
NTKMI+ E+ NP + V DI +++A+ + I+ +D TF +PY +PL GADI ++S
Sbjct: 206 NTKMIYFESIANPTMAVPDILGTIEVAK-KYKILTCLDATFSSPYNIQPLKLGADISLHS 264
Query: 351 LTKYMNGHSDVIMGAAIVNDKAIGDKLRFLQNAMGIVPSPIDCYFVNRSLKTLALRMEHH 530
+KY+ GH+DVI G V+ KL+ Q G SP D + R LKTL LR++
Sbjct: 265 CSKYIGGHTDVIAGVVTVSSYDNWKKLKLQQLTTGSSLSPYDAALLTRGLKTLGLRVDRI 324
Query: 531 KKSSLIIANWLEKHPKIVEVLHPXLXTHP 617
+++ A +LE HPK+ V +P L +HP
Sbjct: 325 SENAQKTAEFLESHPKVERVFYPGLPSHP 353
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +3
Query: 126 TDFT-NIEKVKNAMQENTKMIWIETPTNPLLKVV---DIEAIVKIARSRGDIIVVVDNTF 293
+ FT + E+++ + + TKMI I P NP K+ +++ I ++AR+ D+IVV D +
Sbjct: 159 SQFTIDFEELEKKINKRTKMIVINNPHNPTGKLFSREELQHIAELARNY-DLIVVADEVY 217
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +3
Query: 117 TTFTDFT-NIEKVKNAMQENTKMIWIETPTNPLLKVV---DIEAIVKIARSRGDIIVVVD 284
T+ + FT + +++ + E TKM+ I P NP K+ ++E + +IA+ + ++IV+ D
Sbjct: 156 TSASQFTIDFADMESKINEKTKMLVINNPHNPTGKLFSRHELEKLAEIAK-KHNLIVIAD 214
Query: 285 NTF 293
+
Sbjct: 215 EVY 217
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +3
Query: 117 TTFTDFT-NIEKVKNAMQENTKMIWIETPTNPLLKVV---DIEAIVKIARSRGDIIVVVD 284
T+ + FT + +++ + E TKM+ I P NP K+ ++E + +IA+ + ++IV+ D
Sbjct: 173 TSASQFTIDFADMESKINEKTKMLVINNPHNPTGKLFSRHELEKLAEIAK-KHNLIVIAD 231
Query: 285 NTF 293
+
Sbjct: 232 EVY 234
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 152 KERHARKHQDDLDRDPNKSIIKSR*H*GDRKDREESRRH 268
++R RK ++D DRD + DRKDRE RRH
Sbjct: 14 RDREERKRREDRDRDRERK--------RDRKDRERKRRH 44
>Z78542-10|CAB01751.2| 428|Caenorhabditis elegans Hypothetical
protein C18B12.6 protein.
Length = 428
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 42 IVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTNIEKV 152
+VSS D Y G + LLRQ + + N T DFT+ E++
Sbjct: 98 VVSSSDEYSGGDGLLRQTIQK---NPTRFDFTDEEQM 131
>AL031620-6|CAA20929.2| 428|Caenorhabditis elegans Hypothetical
protein C18B12.6 protein.
Length = 428
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 42 IVSSDDVYGGTNRLLRQVVSRLGINTTFTDFTNIEKV 152
+VSS D Y G + LLRQ + + N T DFT+ E++
Sbjct: 98 VVSSSDEYSGGDGLLRQTIQK---NPTRFDFTDEEQM 131
>Z81056-2|CAB02901.2| 323|Caenorhabditis elegans Hypothetical
protein F09F3.2 protein.
Length = 323
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 364 IYFVSEYITMSAPKSKGFCKYGVKKVLSTTTIMSPRLLAIFTIASMSTTFN--NGFVGVS 191
+Y +++T A K GF K K + TI L + I +S TFN N F
Sbjct: 36 LYLFYKFVTR-ASKPSGFQKLCTMKTFTNCTICMSFLFWVVPITGLSLTFNQLNKFFNQL 94
Query: 190 IQIILVFSCMAFFTFSI 140
I ++ + A+FT S+
Sbjct: 95 IGVMA--ATWAYFTNSL 109
>Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical
protein ZK262.10 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = -1
Query: 358 FVSEYITMSAPKSKGFCKYGVKKVLSTTTIMSPRLLAIFTIASMSTTFNNGFVGVSIQII 179
F + + + P+ + + + +VLS L+A++ S T+N+ + II
Sbjct: 148 FSAYLLLVPEPERRFYMAQVISEVLSQNVHEMNILIAVYEDLSPKVTWNSRLGVFLVSII 207
Query: 178 LVFSCMAFFTFSIFVKS 128
+ S + + FSI + S
Sbjct: 208 SILSVLIYILFSILIVS 224
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 129 DFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKIARSR 260
D N K + M +N IW++ TNPL + +E + KI S+
Sbjct: 77 DIANFVKGRATMLKN---IWLQDNTNPLTMIKKVETMSKIFSSQ 117
>U51995-4|AAA96072.2| 317|Caenorhabditis elegans F-box a protein
protein 53 protein.
Length = 317
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 446 RHGHRSVTDRLLFCEQELKDVSIKNGASQEVVI 544
R+G + + DR F E+ LKD I + ++ VVI
Sbjct: 94 RNGEKKIIDRENFVERALKDFKILSNHARNVVI 126
>Z78417-2|CAB01692.1| 258|Caenorhabditis elegans Hypothetical
protein C35C5.3b protein.
Length = 258
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 176 GVFLHGVLYFFNICKV-RKCSVDSQS*D 96
GVF+ GVL+F ++C V R S + S D
Sbjct: 16 GVFIIGVLFFMSVCDVLRTVSAEEHSHD 43
>U64847-8|AAQ91904.1| 558|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform b protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -1
Query: 352 SEYITMSAPKSKGFCKYGVKKVLSTTTIMSP 260
S +IT++ K+ C++ +K V++ T + P
Sbjct: 333 SSFITLAYNKNSVICRFSIKSVIALTIVSRP 363
>U64847-7|AAB04876.1| 718|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform a protein.
Length = 718
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -1
Query: 352 SEYITMSAPKSKGFCKYGVKKVLSTTTIMSP 260
S +IT++ K+ C++ +K V++ T + P
Sbjct: 493 SSFITLAYNKNSVICRFSIKSVIALTIVSRP 523
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = -1
Query: 301 GVKKVLSTTTIMSPRLLAIFTIASMSTTFNNGFVGVS------IQIILVFSCMAFFTFSI 140
GVK T +MS L + I++ T N G+V ++ VF C + S+
Sbjct: 189 GVKICCEKTVLMSHSLRRVTDISARPDTQNIGYVATEPVGRTYRRLCHVFHCQSLKEVSL 248
Query: 139 FVKSVNVVL 113
+ SVNV L
Sbjct: 249 KIHSVNVKL 257
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = -1
Query: 301 GVKKVLSTTTIMSPRLLAIFTIASMSTTFNNGFVGVS------IQIILVFSCMAFFTFSI 140
GVK T +MS L + I++ T N G+V ++ VF C + S+
Sbjct: 199 GVKICCEKTVLMSHSLRRVTDISARPDTQNIGYVATEPVGRTYRRLCHVFHCQSLKEVSL 258
Query: 139 FVKSVNVVL 113
+ SVNV L
Sbjct: 259 KIHSVNVKL 267
>U55371-2|AAL02524.1| 402|Caenorhabditis elegans Hypothetical
protein T19F4.1a protein.
Length = 402
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 193 SIQIILVFSCMAFFTFSIFVKSVNVVLIPNLE 98
S + ++ ++FF FS+ S+ + +IPNL+
Sbjct: 36 SSSVNVLLCALSFFDFSLLTLSIPIFVIPNLD 67
>U55371-1|AAL02525.1| 432|Caenorhabditis elegans Hypothetical
protein T19F4.1b protein.
Length = 432
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 193 SIQIILVFSCMAFFTFSIFVKSVNVVLIPNLE 98
S + ++ ++FF FS+ S+ + +IPNL+
Sbjct: 36 SSSVNVLLCALSFFDFSLLTLSIPIFVIPNLD 67
>AY919615-1|AAY16564.1| 432|Caenorhabditis elegans FLP-2 receptor
protein.
Length = 432
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 193 SIQIILVFSCMAFFTFSIFVKSVNVVLIPNLE 98
S + ++ ++FF FS+ S+ + +IPNL+
Sbjct: 36 SSSVNVLLCALSFFDFSLLTLSIPIFVIPNLD 67
>AY919614-1|AAY16563.1| 402|Caenorhabditis elegans FLP-2 receptor
protein.
Length = 402
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 193 SIQIILVFSCMAFFTFSIFVKSVNVVLIPNLE 98
S + ++ ++FF FS+ S+ + +IPNL+
Sbjct: 36 SSSVNVLLCALSFFDFSLLTLSIPIFVIPNLD 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,673,088
Number of Sequences: 27780
Number of extensions: 286207
Number of successful extensions: 858
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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