Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0385
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 27 0.21
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 24 1.1
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 24 1.1
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 4.6
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 4.6
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 6.0
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 22 6.0
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 22 6.0
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 8.0
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 8.0
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 8.0
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 26.6 bits (56), Expect = 0.21
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 170 ANYQDDQSRNGKQKIEAKHEVLYTGHSTFESHCYSIKYYRQIVLLRNK 27
A++ D GK + + K+ V+YT H E YY + + +R K
Sbjct: 141 ADFADAPDAIGKTRTKDKYRVVYTDHQRVELE--KEFYYSRYITIRRK 186
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 500 RLTMLRYKQSGRLGRSRSAHTEHVLLRP 583
+L +LR+ QSG L R H ++ P
Sbjct: 109 KLCLLRFSQSGNLNRHMRVHGAASMMPP 136
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 500 RLTMLRYKQSGRLGRSRSAHTEHVLLRP 583
+L +LR+ QSG L R H ++ P
Sbjct: 365 KLCLLRFSQSGNLNRHMRVHGAASMMPP 392
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 620 ELDQLPLEXMSY*TGCSHEXHWYGARRRWSRYRFG 724
E D++ ++ ++ G HW+G +R S+Y G
Sbjct: 180 EGDKVVIDVENHIEGNEVTLHWHGVWQRGSQYYDG 214
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 620 ELDQLPLEXMSY*TGCSHEXHWYGARRRWSRYRFG 724
E D++ ++ ++ G HW+G +R S+Y G
Sbjct: 180 EGDKVVIDVENHIEGNEVTLHWHGVWQRGSQYYDG 214
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -3
Query: 190 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 86
E SAL + NRR+KQ R IPP
Sbjct: 285 EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 319
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -3
Query: 190 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 86
E SAL + NRR+KQ R IPP
Sbjct: 74 EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 108
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -3
Query: 190 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 86
E SAL + NRR+KQ R IPP
Sbjct: 74 EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 108
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 21.4 bits (43), Expect = 8.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 324 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 449
+ TF LL VA A + G + DLE + N N +T
Sbjct: 244 VCTFYNILLCDSVAHTAGELLGAVYSLDLELKHIENFNDFVT 285
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 21.4 bits (43), Expect = 8.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 324 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 449
+ TF LL VA A + G + DLE + N N +T
Sbjct: 244 VCTFYNILLCDSVAHTAGELLGAVYSLDLELKHIENFNDFVT 285
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.4 bits (43), Expect = 8.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 324 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 449
+ TF LL VA A + G + DLE + N N +T
Sbjct: 564 VCTFYNILLCDSVAHTAGELLGAVYSLDLELKHIENFNDFVT 605
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,890
Number of Sequences: 336
Number of extensions: 3368
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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