Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0384
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 33 0.22
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 32 0.38
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 32 0.38
AC025726-5|AAY55897.1| 141|Caenorhabditis elegans Hypothetical ... 30 1.5
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 30 2.0
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 28 8.1
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 28 8.1
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 60 MRWYNGSIAEAVNLSKQRNTIFVVFIQGDNDLSDEMSSTLNDVVVRSKLSNESNFLAVNL 239
M+W+ G++A A+ +S++ + +V+I D++ + + L + + L
Sbjct: 1 MQWFGGNVATAIQISRKNKALLIVYITTDSEDGQIFDGFWQHIDSSNLLCA---VVGIKL 57
Query: 240 KSGSTNYTHFAQIYQIVPVPSLFFIGRNGTPLEVV--CAGVDADNLSARIDRILAE 401
K+G T+ FA IY +P+ + I +NG PLEV+ G D A+ D+ A+
Sbjct: 58 KAGETSAQQFADIYPTPILPAAYLIDQNGKPLEVITPLVGKTYDQFRAKFDKATAQ 113
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 141 GDNDLSDEMSSTLNDVVVRSKLSNESNFLAVNLKSGSTNYTHFAQIYQ-IVPVPSLFFIG 317
G+ ++D ++ N VV +S + + + +Y+ + Y I P+ + +
Sbjct: 303 GETSIADSINYIDNGVVFVGSRLGDSQLIRLMTEPNGGSYSVILETYSNIGPIRDMVMVE 362
Query: 318 RNGTPLEVVCAGVDADNLSARIDR 389
+G P V C G D D S R+ R
Sbjct: 363 SDGQPQLVTCTGADKDG-SLRVIR 385
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 321 NGTPLEVVCAGVDADNLSARIDRI---LAEHRQENPKINDHSDAFIKVLDEYSE 473
+G L++ A V A NL ++ + L +H+ +ND + FIK L+E+++
Sbjct: 82 HGDHLQMQVASVIASNLGPMVEIVEKKLLQHKNAEKLLNDGREVFIKTLEEHNQ 135
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 321 NGTPLEVVCAGVDADNLSARIDRI---LAEHRQENPKINDHSDAFIKVLDEYSE 473
+G L++ A V A NL ++ + L +H+ +ND + FIK L+E+++
Sbjct: 133 HGDHLQMQVASVIASNLGPMVEIVEKKLLQHKNAEKLLNDGREVFIKTLEEHNQ 186
>AC025726-5|AAY55897.1| 141|Caenorhabditis elegans Hypothetical
protein Y71G12B.33 protein.
Length = 141
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Frame = -3
Query: 253 VDPLFRLTARKFDSFESFDLTTTSLSVDDISSDKSLSPCMKTTKIVFLCFDRFTASAM-- 80
VDP T R ++ E + +T ++ S KS+SP + +++ C + +
Sbjct: 16 VDPSMDYTQRIENTTEQEEFDSTKVTTKSKFSAKSVSPLKISYELITTCLLSISGLLLWT 75
Query: 79 -----LPLYQRMVNFQYHRIQSSFFNLI 11
LP Q +V FQY I S NL+
Sbjct: 76 AQPYHLPRQQIIVPFQYFCIFGSLMNLL 103
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 378 RIDRILAEHRQENPKINDHSDAFIKVLDEYSE-SDNYELVCGDE 506
RIDR+ + Q N +ND F+ LD + E D L C E
Sbjct: 626 RIDRVQQQQTQPNSSVNDVERDFVHTLDVFPECCDAVSLNCFQE 669
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 318 RNGTPLEVVCAGVDADNLSARIDR--ILAEHRQENPKINDHSDAFIKVLD--EYSESDNY 485
++GTP + C+ ++ N+S+ + + +++ K N +A ++ +D + S+SD
Sbjct: 1518 KSGTPFQTYCSSINQQNISSHTNELFLFLSMKKDKLKTNVFFNATVEFVDVPQSSQSD-- 1575
Query: 486 ELVCGDEI 509
+CG I
Sbjct: 1576 --ICGQVI 1581
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 318 RNGTPLEVVCAGVDADNLSARIDR--ILAEHRQENPKINDHSDAFIKVLD--EYSESDNY 485
++GTP + C+ ++ N+S+ + + +++ K N +A ++ +D + S+SD
Sbjct: 1518 KSGTPFQTYCSSINQQNISSHTNELFLFLSMKKDKLKTNVFFNATVEFVDVPQSSQSD-- 1575
Query: 486 ELVCGDEI 509
+CG I
Sbjct: 1576 --ICGQVI 1581
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 315 GRNGTPLEVVCAGVDADNLSARIDRILAEHRQEN 416
G G E++C G +A +++ ID ILA + +N
Sbjct: 630 GLGGGDDEILCGGEEASGVTSNIDGILAANLPDN 663
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 650 DGDLDRNRKQVGTHQATDRSETQRERGEKRR 742
D D +R+RK+ DR + +RER K R
Sbjct: 329 DRDRERSRKEREDRSRKDREDRERERSRKER 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,991,519
Number of Sequences: 27780
Number of extensions: 304372
Number of successful extensions: 914
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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