Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0382
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 285 3e-77
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 7e-36
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 138 6e-33
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 134 1e-31
SB_3774| Best HMM Match : DivIC (HMM E-Value=4.4) 116 2e-26
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 111 6e-25
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 2e-20
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 90 2e-18
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 3e-16
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 83 3e-16
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 81 7e-16
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 76 4e-14
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 73 3e-13
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 67 2e-11
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 65 5e-11
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 65 5e-11
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 38 6e-08
SB_732| Best HMM Match : AAA (HMM E-Value=0) 55 7e-08
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 42 5e-04
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11) 35 0.081
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 34 0.11
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 33 0.33
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 33 0.33
SB_30757| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 32 0.57
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 31 0.76
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 31 0.76
SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 31 1.00
SB_53383| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 30 1.7
SB_33932| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19) 30 2.3
SB_16447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_2234| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19) 30 2.3
SB_56096| Best HMM Match : fn3 (HMM E-Value=1.3e-24) 29 3.0
SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 29 5.3
SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_12803| Best HMM Match : Lig_chan (HMM E-Value=0) 29 5.3
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 29 5.3
SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12) 28 7.0
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 28 7.0
SB_25750| Best HMM Match : AFG1_ATPase (HMM E-Value=5.6e-12) 28 7.0
SB_3946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_9874| Best HMM Match : Sigma54_activat (HMM E-Value=0) 28 9.3
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 28 9.3
SB_14165| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 285 bits (699), Expect = 3e-77
Identities = 148/195 (75%), Positives = 158/195 (81%)
Frame = +2
Query: 77 LQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVH 256
++L+V EK +NLRRL+AQRNELNAKVRMLR GSYVGEVVKPMDKKKVLVKVH
Sbjct: 82 VKLVVTEKIKNLRRLEAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVH 141
Query: 257 PEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEM 436
PEGKFVVD+DK +D+ +V DPLVSLMMVEKVPDSTYEM
Sbjct: 142 PEGKFVVDIDKGIDMAEV-----------------------DPLVSLMMVEKVPDSTYEM 178
Query: 437 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 616
VGGLDKQIKEIKEVIELPVKHPELF+ALGI QPKGVLLYGPPGTGKTLLARAVAHHTECT
Sbjct: 179 VGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTECT 238
Query: 617 FIRVSGSELVQKFIG 661
FIRVSGSELVQKFIG
Sbjct: 239 FIRVSGSELVQKFIG 253
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
FV +REHAPSIIFMDEI+SI
Sbjct: 277 FVDSREHAPSIIFMDEIDSI 296
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 648 KNLLGEGSRMVRELF---RNGQRTCSFYHFHGR 737
+ +GEG+RMVRELF R+G+ + Y R
Sbjct: 249 QKFIGEGARMVRELFVMARHGENLQAMYFVDSR 281
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 147 bits (357), Expect = 7e-36
Identities = 81/203 (39%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Frame = +2
Query: 59 ITKIEELQLIVAEKSQNLRRLQAQRN---ELNAKVRMLRXXXXXXXXXGSYVGEVVKPMD 229
+ +I++ L+ E QN RL+ Q E +KV LR VG + + +D
Sbjct: 260 LDRIKDFLLMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMS-------VGNLEEIID 312
Query: 230 KKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVE 409
+V + V + VD + + C V L ++ + + +L + DP+V++M +E
Sbjct: 313 DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVTVMKLE 372
Query: 410 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 589
K P +Y +GGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+
Sbjct: 373 KAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAK 432
Query: 590 AVAHHTECTFIRVSGSELVQKFI 658
AVA+ T TF+RV GSEL+QK++
Sbjct: 433 AVANQTSATFLRVVGSELIQKYL 455
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 138 bits (333), Expect = 6e-33
Identities = 65/109 (59%), Positives = 83/109 (76%)
Frame = +2
Query: 335 RNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFD 514
RN+ Y +H LP K+DP V++M VE+ PD TY +GG +QI +++EV+E P+ HPE F
Sbjct: 53 RNK-YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFV 111
Query: 515 ALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG 661
LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++G
Sbjct: 112 NLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG 160
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 134 bits (323), Expect = 1e-31
Identities = 64/153 (41%), Positives = 97/153 (63%)
Frame = +2
Query: 203 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 382
+G+ ++ +D+ +V + V + +D + + VAL S L ILP + D
Sbjct: 88 IGQFLEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEAD 147
Query: 383 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 562
++++ E+ P+ +Y +GG+D Q +EI+E +ELP+ H EL+ +GI P+GVLLYGPP
Sbjct: 148 SSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPP 207
Query: 563 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIG 661
G GKT+LA+AVAHHT FIRV GSE VQK++G
Sbjct: 208 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG 240
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/20 (60%), Positives = 19/20 (95%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +A+E+AP+IIF+DEI++I
Sbjct: 250 FRLAKENAPAIIFIDEIDAI 269
>SB_3774| Best HMM Match : DivIC (HMM E-Value=4.4)
Length = 158
Score = 116 bits (279), Expect = 2e-26
Identities = 55/75 (73%), Positives = 63/75 (84%)
Frame = +2
Query: 77 LQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVH 256
++L+V EK +NLRRL+AQRNELNAKVRMLR GSYVGEVVKPMDKKKVLVKVH
Sbjct: 82 VKLVVTEKIKNLRRLEAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVH 141
Query: 257 PEGKFVVDLDKNVDI 301
PEGKFVVD+DK +D+
Sbjct: 142 PEGKFVVDIDKGIDM 156
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 111 bits (267), Expect = 6e-25
Identities = 57/124 (45%), Positives = 80/124 (64%)
Frame = +2
Query: 194 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPN 373
G VGEV+K + ++K +VK ++VV + VD + RVAL + T+ + LP
Sbjct: 56 GQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPR 115
Query: 374 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 553
+VDPLV M E + +Y VGGL +QI+E++EVIELP+ +PELF +GIA PKG LL+
Sbjct: 116 EVDPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLF 175
Query: 554 GPPG 565
GPPG
Sbjct: 176 GPPG 179
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/89 (51%), Positives = 64/89 (71%)
Frame = +2
Query: 410 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 589
K+PD +++ VGGLD +EI + I+LP+ HPELF A G+ + GVLLYGPPGTGKTL+A+
Sbjct: 805 KIPDISWKDVGGLDSVKEEILDTIQLPLLHPELF-AAGLRR-SGVLLYGPPGTGKTLMAK 862
Query: 590 AVAHHTECTFIRVSGSELVQKFIGRRQQN 676
AVA F+ V G EL+ ++G+ +QN
Sbjct: 863 AVATECSLNFLSVKGPELINMYVGQSEQN 891
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 92.7 bits (220), Expect = 3e-19
Identities = 37/82 (45%), Positives = 61/82 (74%)
Frame = +2
Query: 425 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 604
+++ +GGL QI+ ++E+IE+P+ +PELF A G+ P+G+LLYGP GTGKT++ARAVA+
Sbjct: 254 SFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARAVANE 313
Query: 605 TECTFIRVSGSELVQKFIGRRQ 670
T F ++G E++ ++ G +
Sbjct: 314 TGVHFFCINGPEVLSRYYGETE 335
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +2
Query: 410 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 589
+VP + VGG + +++KE +E P+KHPE F LGI P+G+L+YGPPG KTL+AR
Sbjct: 530 EVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIAR 589
Query: 590 AVAHHTECTFIRVSGSELVQKFIGRRQQ 673
A+A + FI + G EL K++G ++
Sbjct: 590 ALATESGLNFIAIKGPELFSKWVGESEK 617
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 559 SGHWKDIISSCCRSPH*VYFHTCFWIRIGTKIYWEKAAEWCESSFVMAREHAPSIIFMDE 738
SG K +I+ + V+F + ++ Y E A E F A+ +PSI+F+DE
Sbjct: 299 SGTGKTMIARAVANETGVHFFCINGPEVLSRYYGETEARLREI-FTEAQNKSPSIVFIDE 357
Query: 739 INSI 750
++++
Sbjct: 358 LDAL 361
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F+ AR APSI+F DE+++I
Sbjct: 623 FLKARATAPSIVFFDELDAI 642
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 90.2 bits (214), Expect = 2e-18
Identities = 38/91 (41%), Positives = 62/91 (68%)
Frame = +2
Query: 404 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 583
V +VP+ +++ +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 301 VVEVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 360
Query: 584 ARAVAHHTECTFIRVSGSELVQKFIGRRQQN 676
A+A+A+ + FI + G EL+ + G + N
Sbjct: 361 AKAIANECQANFISIKGPELLTMWFGESEAN 391
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/86 (41%), Positives = 57/86 (66%)
Frame = +2
Query: 404 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 583
V ++ + ++ VGGL+ + +++ IE P+ HPE F +G+ +P+GVLLYGPPG KT L
Sbjct: 475 VVRLQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTL 534
Query: 584 ARAVAHHTECTFIRVSGSELVQKFIG 661
RA A T CTF+ +S ++L ++G
Sbjct: 535 VRAAASSTHCTFMSLSCAQLFSSYVG 560
Score = 70.5 bits (165), Expect = 1e-12
Identities = 41/132 (31%), Positives = 66/132 (50%)
Frame = +2
Query: 299 INDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 478
I DVT+ + N +Y ++ K + + + V DS ++ GLD IK +KE+
Sbjct: 174 IEDVTS----VIDNNAYV---VITEKTNINIESVKVGSSVDSGNIILSGLDDSIKMLKEL 226
Query: 479 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 658
++ P+ +PE F LGI PKG+LL G PG GKTLL + +G+++
Sbjct: 227 VQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHA 286
Query: 659 GRRQQNGARALS 694
G ++N R +
Sbjct: 287 GESEENLRRVFN 298
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/86 (41%), Positives = 57/86 (66%)
Frame = +2
Query: 404 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 583
V ++ + ++ VGGL+ + +++ IE P+ HPE F +G+ +P+GVLLYGPPG KT L
Sbjct: 4 VVRLQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTL 63
Query: 584 ARAVAHHTECTFIRVSGSELVQKFIG 661
RA A T CTF+ +S ++L ++G
Sbjct: 64 VRAAASSTHCTFMSLSCAQLFSSYVG 89
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 81.4 bits (192), Expect = 7e-16
Identities = 37/87 (42%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 604
++ VGGL+KQI+ +KE+I P+ +PE+FD I P+GVL +GPPGTGKTL+ARA+A+
Sbjct: 883 FDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALANEC 942
Query: 605 ----TECTFIRVSGSELVQKFIGRRQQ 673
+ +F G++ + K++G ++
Sbjct: 943 SQGDKKVSFFMRKGADCLSKWVGESER 969
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/62 (51%), Positives = 44/62 (70%)
Frame = +2
Query: 488 PVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGRR 667
PV+HPE F ALG+ P G+LL GPPG GKTLLA+A+A+ + FI V G EL+ ++G
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGES 61
Query: 668 QQ 673
++
Sbjct: 62 ER 63
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +2
Query: 404 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 583
V V +S + V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLL
Sbjct: 39 VTYVKESEWIDVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLL 97
Query: 584 ARAVAHHTECTFIRVSGSELVQKFIG 661
A+AVA F+ +SGSE ++ F+G
Sbjct: 98 AKAVAGEAGVPFLSISGSEFLEMFVG 123
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F AR++AP IIF+DEI+++
Sbjct: 133 FAQARKNAPCIIFIDEIDAV 152
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +2
Query: 488 PVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 646
PV+HPE F ALG+ P G+LL GPPG GKTLLA+A+A+ + FI V G EL+
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELL 54
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 70.5 bits (165), Expect = 1e-12
Identities = 41/132 (31%), Positives = 66/132 (50%)
Frame = +2
Query: 299 INDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 478
I DVT+ + N +Y ++ K + + + V DS ++ GLD IK +KE+
Sbjct: 4 IEDVTS----VIDNNAYV---VITEKTNINIESVKVGSSVDSGNIILSGLDDSIKMLKEL 56
Query: 479 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 658
++ P+ +PE F LGI PKG+LL G PG GKTLL + +G+++
Sbjct: 57 VQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHA 116
Query: 659 GRRQQNGARALS 694
G ++N R +
Sbjct: 117 GESEENLRRVFN 128
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +2
Query: 401 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKT 577
+++K P+ + + L + K ++E + LP+ P+ F GI +P +GVL+ GPPGTGKT
Sbjct: 240 ILQKNPNVHWADIADLHEAKKLLEEAVVLPLLMPDYFQ--GIRRPWRGVLMVGPPGTGKT 297
Query: 578 LLARAVAHHTECTFIRVSGSELVQKFIGRRQQ 673
+LA+AVA TF VS S L K+ G ++
Sbjct: 298 MLAKAVATECGTTFFNVSSSTLTSKYRGESEK 329
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F MAR +APS IF+DEI+SI
Sbjct: 335 FEMARFYAPSTIFVDEIDSI 354
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/82 (43%), Positives = 46/82 (56%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 607
+E VGGL ++E + P K LF + G+LLYGPPGTGKTLLA VA
Sbjct: 666 WENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAKEC 725
Query: 608 ECTFIRVSGSELVQKFIGRRQQ 673
FI + G EL+ K+IG +Q
Sbjct: 726 GLNFISIKGPELLSKYIGASEQ 747
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +2
Query: 446 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 625
+D+ +E++EV+E +++PE F LG P GVLL G PGTGKTLLA+AVA F
Sbjct: 136 VDEAKEELQEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFFF 194
Query: 626 VSGSELVQKFIG 661
SGSE + F+G
Sbjct: 195 CSGSEFDEMFVG 206
Score = 31.1 bits (67), Expect = 1.00
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F A+EHAP I+F+DE+++I
Sbjct: 216 FAAAKEHAPCIVFVDELDAI 235
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 65.3 bits (152), Expect = 5e-11
Identities = 28/79 (35%), Positives = 50/79 (63%)
Frame = +2
Query: 437 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 616
+GG ++++ +++ + + HPE+F LG+ G LL+GPPG GKTLLA A+A E
Sbjct: 679 IGGCSNTLEQVGKLL-VHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMP 737
Query: 617 FIRVSGSELVQKFIGRRQQ 673
F++++ +E+V G ++
Sbjct: 738 FLKLAATEIVSGVSGESEE 756
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 607
++ V G+ + E+ E ++ +K + LG PKG LL GPPGTGKTLLA+AVA
Sbjct: 124 FKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIPKGALLVGPPGTGKTLLAKAVATEA 182
Query: 608 ECTFIRVSGSELVQKFIG 661
+ F+ ++GS+ V+ F G
Sbjct: 183 DVPFLSMAGSDFVEMFAG 200
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 37.5 bits (83), Expect(2) = 6e-08
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 386 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 556
L S +++EK P+ + + GL+ + +KE + LP+K P LF G P +G+LLYG
Sbjct: 83 LNSAIVMEK-PNVKWSDIAGLESAKEALKEAVILPIKFPHLF--TGKRTPWRGILLYG 137
Score = 37.1 bits (82), Expect(2) = 6e-08
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 563 GTGKTLLARAVA-HHTECTFIRVSGSELVQKFIGRRQQ 673
GTGK+ LA+AVA TFI VS S+LV K++G ++
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESER 212
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +ARE+ PSIIF+DE++S+
Sbjct: 218 FELARENKPSIIFIDEVDSL 237
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 503 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR-VSGSELVQKFIGRRQQN 676
++ D +G+ KG+LL+GPPGTGKTL+AR + + +SG E++ KF+G + N
Sbjct: 172 DVVDKMGLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGESEAN 230
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2
Query: 536 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 646
+ +L YGPPGTGKT+ A+++A H+ + ++G ++V
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVV 366
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/79 (27%), Positives = 41/79 (51%)
Frame = +2
Query: 233 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 412
K ++K + + + V+ ++T V + +SY + + LP + D V M V++
Sbjct: 88 KCAVIKTSTRQTYFLPVIGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDE 147
Query: 413 VPDSTYEMVGGLDKQIKEI 469
P Y +GGLD+QI+E+
Sbjct: 148 RPTEQYSDIGGLDQQIQEM 166
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +1
Query: 670 AEWCESSFVMAREHAPSIIFMDEINSI 750
A+ +F +A+E AP+IIF+DE+++I
Sbjct: 172 AKLVRDAFALAKEKAPAIIFIDELDAI 198
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 35.5 bits (78), Expect = 0.046
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 512 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 640
D G K LL GPPG GKT LA +A H + ++ S+
Sbjct: 373 DDNGYPVHKVALLCGPPGLGKTTLAHVIAQHAGYNVVEMNASD 415
>SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11)
Length = 806
Score = 34.7 bits (76), Expect = 0.081
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 533 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGRRQQNGARA 688
P + GPP +GKTL+ + + H + IR+ ++ + I + QQ+ ARA
Sbjct: 358 PVRACILGPPASGKTLVVKQLCTHYKLHHIRI--QSVIDEAIEKLQQSAARA 407
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 446 LDKQIKE--IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 598
LD+ I E + +V E + P + GI +G LLYGPPG GK+ +A+A
Sbjct: 192 LDEGIAEGILADVKEF-IGSPRWYMDRGIPYRRGYLLYGPPGCGKSSFIQALA 243
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 533 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 640
P+ +LL G PG GKT L A+A + +R++ SE
Sbjct: 1617 PRPILLEGSPGVGKTSLVSAIAKASGHELVRINLSE 1652
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 518 LGIAQPKGVLLYGPPGTGKTLLARAVA 598
L +A GVLL GP G+GKT L VA
Sbjct: 113 LAVAAGSGVLLEGPVGSGKTCLVEHVA 139
>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
Length = 1064
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 521 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGR 664
G ++P L++GPPGTGKT+ V + SG+++ +K GR
Sbjct: 547 GTSRPHPYLIFGPPGTGKTI--TVVESIKQVMINHESGNKVTRKDEGR 592
>SB_30757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 307 CHGQLSCRSSQRKLYLTQNTTQQSRSSCV 393
CH LSC SQR L Q Q+SR CV
Sbjct: 114 CHVGLSCLKSQRTLRALQKALQRSRVECV 142
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 527 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 652
A K LL GPPG GKT A V +++ ++ S+ K
Sbjct: 269 ASLKAALLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSK 310
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQ 649
+LL GP G+GKTLLA+ +A + F + L Q
Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDVPFAICDCTALTQ 308
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 536 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 643
+ VL+ G PGTGKT +A +A + F ++GSE+
Sbjct: 170 RAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEI 207
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 266 KFVVDLDKNV---DINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEM 436
K ++D D V DIN+ T N + L +E+Y+ H++L K D + S +E T ++
Sbjct: 23 KALLDRDGKVCMLDINEKTGNETLKLLSENYSKHRVLFIKCD-VTSQPQMEAAFQRTKDV 81
Query: 437 VGGLD 451
G LD
Sbjct: 82 FGRLD 86
>SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 440 GGLDKQIKEIKEVIE-LPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 616
GG D+ KEI V E +P D I V + G PG+GKT LA+ +A + T
Sbjct: 311 GGPDEAFKEISRVFEGVPDSSNAALDDFDI-----VFIVGGPGSGKTELAKLLAESSGRT 365
Query: 617 FI 622
I
Sbjct: 366 HI 367
>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
Length = 628
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 521 GIAQPKGVLLYGPPGTGKTL 580
G ++P LL+GPPGTGKT+
Sbjct: 587 GQSRPTPYLLFGPPGTGKTV 606
>SB_53383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 518 LGIAQPKGVLLYGPPGTGKTLLARAVA 598
L +A GVLL GP G+GKT L VA
Sbjct: 113 LAVAAGSGVLLEGPVGSGKTCLVEHVA 139
>SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Frame = +2
Query: 512 DALGIA--QPKGVLLYGPPGTGKT 577
+A+G A QP+ +++GPPGTGKT
Sbjct: 241 EAVGFALRQPEVAVIHGPPGTGKT 264
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARAVA 598
+L YGPPGTGKT AVA
Sbjct: 13 LLFYGPPGTGKTSTILAVA 31
>SB_33932| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19)
Length = 541
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 296 DINDVTANCRVALRNESYTLHKILPNKVDPL 388
DI ++ C+VA E +TL + LPN +D L
Sbjct: 154 DIRPISLTCQVAKLMEGFTLSRALPNILDRL 184
>SB_16447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 296 DINDVTANCRVALRNESYTLHKILPNKVDPL 388
DI ++ C+VA E +TL + LPN +D L
Sbjct: 525 DIRPISLTCQVAKLMEGFTLSRALPNILDRL 555
>SB_2234| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19)
Length = 476
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 296 DINDVTANCRVALRNESYTLHKILPNKVDPL 388
DI ++ C+VA E +TL + LPN +D L
Sbjct: 89 DIRPISLTCQVAKLMEGFTLSRALPNILDRL 119
>SB_56096| Best HMM Match : fn3 (HMM E-Value=1.3e-24)
Length = 1065
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 284 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPL 388
D N+ + + +CR A+ E+++ H PN VDPL
Sbjct: 215 DCNLQLTCLQPSCRYAVLVEAFSSHPNDPNAVDPL 249
>SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/52 (21%), Positives = 27/52 (51%)
Frame = +2
Query: 305 DVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQI 460
D+ + L + LHK++PN V+ + + ++ D ++ ++G D ++
Sbjct: 463 DLVKKAQTTLATANLRLHKVVPNSVEVMEAFPAEDRAKDISWGVLGPRDGRV 514
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 281 LDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 418
+D+N + + N +L L ++PN VD + M++KVP
Sbjct: 952 IDENFKVWLIEINVNPSLSTSCQVLKDLMPNMVDNTIRPEMIQKVP 997
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2
Query: 527 AQPKGVLLYGPPGTGKTLLARAV 595
A K VLL GPPG GKT L V
Sbjct: 49 AYKKHVLLTGPPGIGKTTLCSKV 71
>SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1669
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 296 DINDVTANCRVALRNESYTLHKILP---NKVDP 385
DI + C+VA E +TL++ILP K+DP
Sbjct: 1274 DIRPIALTCQVAKVMEGFTLNRILPPIMRKLDP 1306
>SB_12803| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 1001
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -3
Query: 394 RHKRIDFVG*YFV*GIAFVAKSDTTIGRDIVNINVLV 284
R + IDF Y GI +A++DTT+G +VN++ ++
Sbjct: 390 RSRVIDFSSPYGEVGIGILARTDTTLG-SVVNMDFMI 425
>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4085
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 652
++L G GTGK + R A +C FI+ S + Q+
Sbjct: 2179 MMLVGVGGTGKVTVVRLAAFIQDCRFIKPQVSRVYQR 2215
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +AR + P++IFMDEI+S+
Sbjct: 12 FAVARCYLPAVIFMDEIDSL 31
>SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1786
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 209 EVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPL 388
+ V P+ K + VHP K D+ ++ C++A E +TL ++LP+ ++ L
Sbjct: 309 DFVPPLLKSAI---VHPISKQTPPKSIKDDLRPISLTCQMAKICEGFTLIRVLPSVLEQL 365
>SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 808
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 353 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPE 505
L+K+L ++ S+ +E+ + + V GL+K+IK++++ EL K +
Sbjct: 511 LNKVLERNMELESSVSAMERKNKALEKSVNGLEKEIKKMEQNYELKSKESD 561
>SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12)
Length = 1799
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 296 DINDVTANCRVALRNESYTLHKILPNKVDPL 388
DI ++ C+VA E TL + LPN +D L
Sbjct: 473 DIRPISLTCQVAKLMEGLTLSRALPNILDRL 503
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +2
Query: 446 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 601
L K KE I VK +LF + + K VLL G PG GKT L + + +
Sbjct: 959 LKKLFKE--PTISENVKINDLFKSKTKKRMKRVLLEGNPGVGKTTLCKKLVN 1008
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +2
Query: 446 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 601
L K KE I VK +LF + + K VLL G PG GKT L + + +
Sbjct: 146 LKKLFKE--PTISENVKINDLFKSKTKKRMKRVLLEGNPGVGKTTLCKKLVN 195
>SB_25750| Best HMM Match : AFG1_ATPase (HMM E-Value=5.6e-12)
Length = 424
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 533 PKGVLLYGPPGTGKTLL 583
PKG+ LYG G+GKT+L
Sbjct: 8 PKGLYLYGGVGSGKTIL 24
>SB_3946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 296 DINDVTANCRVALRNESYTLHKILPNKVDPL 388
DI ++ C+VA E TL + LPN +D L
Sbjct: 511 DIRPISLTCQVAKLMEGLTLSRALPNILDRL 541
>SB_9874| Best HMM Match : Sigma54_activat (HMM E-Value=0)
Length = 314
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARAVAHHT---ECTFIRVSGSELVQKFI 658
VL+ G GTGK L+ARA+ +++ + FI+V+ + L + +
Sbjct: 191 VLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLL 232
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 545 LLYGPPGTGKTLLARAVAHH 604
++YG PGTGK+ A A+A H
Sbjct: 2169 MVYGQPGTGKSWTAVAIACH 2188
>SB_14165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1837
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 296 DINDVTANCRVALRNESYTLHKILP---NKVDP 385
DI + C+VA E +TL +ILP K+DP
Sbjct: 1491 DIRPIALTCQVAKVMEGFTLSRILPPIMRKLDP 1523
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,843,980
Number of Sequences: 59808
Number of extensions: 456024
Number of successful extensions: 1417
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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