Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0382
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.82 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.8  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   7.6  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   7.6  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
 Frame = +2

Query: 302  NDVTANCRVALRNESYTLHKILPNKVDPL-VSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 478
            N   ANC   L N    L  +LPN  + L  SL+ +E       + V G     +    +
Sbjct: 936  NSDLANCFSDLINPGSDLTSLLPNSFEALDQSLLTMETTTTIIRDRVSGYSSLHESQNRL 995

Query: 479  IELPVKHPELFDALGIAQPKGVLLYGPPGTG 571
              +  +H E  + L   Q +  L     GTG
Sbjct: 996  DRIVEEHQEQREMLQSIQQEYQLQMQSNGTG 1026


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 631  WIRIGTKIYWEKAAEWCESSFVM 699
            W+ +G K+Y+  A  WC   F++
Sbjct: 1358 WLALGFKVYFTNA--WCWLDFII 1378


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 434 MVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 553
           +VGG    +++   ++E   K  +L + L    PKG L++
Sbjct: 390 IVGGACADVEQTIHLVEKFKKRKKLEEILNGGNPKGTLVF 429


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = -3

Query: 535 WLR-NPKGIKQLWVLHRQLNH 476
           WL  N  G   LW+ +RQ NH
Sbjct: 228 WLEINVTGAVNLWLKNRQANH 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,239
Number of Sequences: 2352
Number of extensions: 14644
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)