Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0382
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 346 1e-95
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 322 2e-88
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 322 2e-88
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 157 6e-39
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 157 8e-39
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 148 4e-36
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 148 4e-36
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 129 2e-30
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 120 1e-27
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 119 2e-27
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 108 4e-24
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 107 1e-23
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 81 6e-16
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 79 3e-15
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 79 3e-15
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 77 1e-14
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 77 1e-14
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 77 1e-14
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 77 1e-14
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 77 1e-14
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 77 1e-14
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 74 9e-14
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 74 9e-14
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 73 2e-13
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 70 2e-12
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 65 6e-11
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 65 6e-11
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 65 6e-11
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 63 2e-10
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 63 2e-10
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 61 7e-10
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 61 7e-10
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 61 7e-10
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 59 3e-09
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 59 3e-09
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 36 0.031
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 36 0.031
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 33 0.16
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 32 0.50
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 32 0.50
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 32 0.50
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 31 0.87
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 31 0.87
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 30 2.0
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 30 2.0
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 2.0
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 29 2.7
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 29 2.7
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 29 3.5
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 3.5
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear recep... 28 8.1
AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear horm... 28 8.1
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 346 bits (850), Expect = 1e-95
Identities = 166/205 (80%), Positives = 181/205 (88%)
Frame = +2
Query: 47 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 226
R Y+ TK+++ Q VA+KSQN+RRLQAQRNELN KVRML+ GSYVGEV K M
Sbjct: 31 RKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAM 90
Query: 227 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 406
DKKKVLVKVHPEGK+VVD+DK++DIN + RVALR +SY LHK+LPNKVDPLVSLMMV
Sbjct: 91 DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMV 150
Query: 407 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 586
EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL+GPPGTGKTLLA
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
Query: 587 RAVAHHTECTFIRVSGSELVQKFIG 661
RAVAHHTECTFIRVSGSELVQKFIG
Sbjct: 211 RAVAHHTECTFIRVSGSELVQKFIG 235
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
Frame = +1
Query: 610 VYFHT-CFWIRI-GTKIYWE---KAAEWCESSFVMAREHAPSIIFMDEINSI 750
V HT C +IR+ G+++ + + A FVMAREHAPSIIFMDEI+SI
Sbjct: 213 VAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI 264
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 322 bits (790), Expect = 2e-88
Identities = 154/205 (75%), Positives = 176/205 (85%)
Frame = +2
Query: 47 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 226
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 26 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85
Query: 227 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 406
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 86 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 145
Query: 407 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 586
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 146 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 205
Query: 587 RAVAHHTECTFIRVSGSELVQKFIG 661
RAVAHHTECTFIRVSGSELVQKFIG
Sbjct: 206 RAVAHHTECTFIRVSGSELVQKFIG 230
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
Frame = +1
Query: 610 VYFHT-CFWIRI-GTKIYWE---KAAEWCESSFVMAREHAPSIIFMDEINSI 750
V HT C +IR+ G+++ + + A FVMAREHAPSIIFMDEI+SI
Sbjct: 208 VAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI 259
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 322 bits (790), Expect = 2e-88
Identities = 154/205 (75%), Positives = 176/205 (85%)
Frame = +2
Query: 47 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 226
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 47 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106
Query: 227 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 406
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 107 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 166
Query: 407 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 586
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 226
Query: 587 RAVAHHTECTFIRVSGSELVQKFIG 661
RAVAHHTECTFIRVSGSELVQKFIG
Sbjct: 227 RAVAHHTECTFIRVSGSELVQKFIG 251
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
Frame = +1
Query: 610 VYFHT-CFWIRI-GTKIYWE---KAAEWCESSFVMAREHAPSIIFMDEINSI 750
V HT C +IR+ G+++ + + A FVMAREHAPSIIFMDEI+SI
Sbjct: 229 VAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI 280
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 157 bits (382), Expect = 6e-39
Identities = 76/142 (53%), Positives = 97/142 (68%)
Frame = +2
Query: 236 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 415
+ L+ V KFVVDL +V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 416 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 595
PD TY VGG QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 596 AHHTECTFIRVSGSELVQKFIG 661
A+ T+ FIRV GSELVQK++G
Sbjct: 232 ANRTDACFIRVIGSELVQKYVG 253
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 157 bits (381), Expect = 8e-39
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Frame = +2
Query: 65 KIEELQLIVAEKSQNLRRLQAQ---RNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 235
+I++ L+ E QN RL+ Q + E AKV LR VG + + +D +
Sbjct: 70 RIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA-------VGSLEEIIDDQ 122
Query: 236 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 415
+V + + V++ VD + C V L ++++ + +L + DP+VS+M +EK
Sbjct: 123 HAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182
Query: 416 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 595
P TY VGGLD+QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AV
Sbjct: 183 PQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAV 242
Query: 596 AHHTECTFIRVSGSELVQKFIG 661
A+ T TF+R+ GSEL+QK++G
Sbjct: 243 ANQTSATFLRIVGSELIQKYLG 264
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +A E+APSI+F+DEI+++
Sbjct: 274 FRVAEENAPSIVFIDEIDAV 293
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 148 bits (359), Expect = 4e-36
Identities = 75/186 (40%), Positives = 115/186 (61%)
Frame = +2
Query: 104 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 283
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 33 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 92
Query: 284 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 463
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 93 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 152
Query: 464 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 643
E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++V S +
Sbjct: 153 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 212
Query: 644 VQKFIG 661
V K+IG
Sbjct: 213 VDKYIG 218
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 655 YWEKAAEWCESSFVMAREHAPSIIFMDEINSI 750
Y ++A F AR+H P I+FMDEI++I
Sbjct: 216 YIGESARMIREMFNYARDHQPCIVFMDEIDAI 247
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 148 bits (359), Expect = 4e-36
Identities = 75/186 (40%), Positives = 115/186 (61%)
Frame = +2
Query: 104 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 283
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 41 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 100
Query: 284 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 463
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 101 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 160
Query: 464 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 643
E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++V S +
Sbjct: 161 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 220
Query: 644 VQKFIG 661
V K+IG
Sbjct: 221 VDKYIG 226
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 655 YWEKAAEWCESSFVMAREHAPSIIFMDEINSI 750
Y ++A F AR+H P I+FMDEI++I
Sbjct: 224 YIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 129 bits (312), Expect = 2e-30
Identities = 61/153 (39%), Positives = 96/153 (62%)
Frame = +2
Query: 203 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 382
+G+ ++ +D+ +V + V + +D + C VAL S L +LP + D
Sbjct: 85 IGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEAD 144
Query: 383 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 562
+ ++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204
Query: 563 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIG 661
G GKT+LA+AVA +T +FIRV GSE VQK++G
Sbjct: 205 GCGKTMLAKAVAANTAASFIRVVGSEFVQKYLG 237
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/20 (60%), Positives = 19/20 (95%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +A+E++PSIIF+DEI++I
Sbjct: 247 FRLAKENSPSIIFIDEIDAI 266
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 120 bits (289), Expect = 1e-27
Identities = 59/143 (41%), Positives = 89/143 (62%)
Frame = +2
Query: 233 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 412
K ++K + + + VD +++ V + +SY + + LP + D V M V++
Sbjct: 111 KCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDE 170
Query: 413 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 592
P Y +GG DKQI+E+ E + LP+ H + F LGI PKGVL+YGPPGTGKT++ARA
Sbjct: 171 RPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARA 230
Query: 593 VAHHTECTFIRVSGSELVQKFIG 661
VA T+ TF++++G +LVQ FIG
Sbjct: 231 VAAQTKSTFLKLAGPQLVQMFIG 253
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +1
Query: 670 AEWCESSFVMAREHAPSIIFMDEINSI 750
A+ +F +A+E AP+IIF+DE+++I
Sbjct: 256 AKLVRDAFALAKEKAPAIIFIDELDAI 282
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 119 bits (287), Expect = 2e-27
Identities = 54/100 (54%), Positives = 73/100 (73%)
Frame = +2
Query: 362 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 541
+L +K+D VEK P T++ +GG + QI+E+KE +ELP+ HPE ++ +GI PKG
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKG 219
Query: 542 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG 661
V+LYG PGTGKTLLA+AVA+ T TFIR +GS+LVQK G
Sbjct: 220 VILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSG 259
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F MA+E APSI+F+DEI+++
Sbjct: 269 FQMAKEQAPSIVFIDEIDAV 288
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 108 bits (260), Expect = 4e-24
Identities = 50/116 (43%), Positives = 76/116 (65%)
Frame = +2
Query: 380 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 559
DP+ E + D Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 560 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGRRQQNGARALS*WPENMLLLSF 727
PGTGKTL+ARAVA+ T F ++G E++ K G + N +A +N + F
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILF 308
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +2
Query: 293 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 466
+D+ D + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 436 IDLEDDQIDAEV-LNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 494
Query: 467 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 646
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+
Sbjct: 495 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 554
Query: 647 QKFIGRRQQN 676
+ G + N
Sbjct: 555 TMWFGESEAN 564
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 107 bits (256), Expect = 1e-23
Identities = 48/116 (41%), Positives = 77/116 (66%)
Frame = +2
Query: 380 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 559
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 560 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGRRQQNGARALS*WPENMLLLSF 727
PGTGKTL+ARAVA+ T F ++G E++ K G + N +A + +N + F
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILF 307
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Frame = +2
Query: 293 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 466
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 467 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 646
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553
Query: 647 QKFIGRRQQN 676
+ G + N
Sbjct: 554 TMWFGESEAN 563
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 107 bits (256), Expect = 1e-23
Identities = 48/116 (41%), Positives = 77/116 (66%)
Frame = +2
Query: 380 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 559
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 560 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGRRQQNGARALS*WPENMLLLSF 727
PGTGKTL+ARAVA+ T F ++G E++ K G + N +A + +N + F
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILF 307
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Frame = +2
Query: 293 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 466
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 467 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 646
++E+++ PV+HPE + G+ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+
Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553
Query: 647 QKFIGRRQQN 676
+ G + N
Sbjct: 554 TMWFGESEAN 563
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/96 (39%), Positives = 59/96 (61%)
Frame = +2
Query: 374 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 553
++ P + +VP+ ++ +GG ++ EI++ + P KHPE F+ GI P G+LLY
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 554 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG 661
GPPG KTL+ARA+A + F+ V G EL K++G
Sbjct: 500 GPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVG 535
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 533 PKGVLLYGPPGTGKTLLARAVA 598
P VL++G PG+GKTLL + VA
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVA 293
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +2
Query: 425 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 604
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 605 TECTFIRVSGSELVQKFIGRRQQN 676
+ + + V G EL+ K+IG ++N
Sbjct: 786 SNFSVVNVKGPELLSKYIGASEEN 809
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +2
Query: 425 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 604
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 605 TECTFIRVSGSELVQKFIGRRQQN 676
+ + + V G EL+ K+IG ++N
Sbjct: 786 SNFSVVNVKGPELLSKYIGASEEN 809
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +2
Query: 431 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 610
E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A ++
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 61
Query: 611 CTFIRVSGSELVQKFIGRRQQN 676
+ + V G EL+ K+IG ++N
Sbjct: 62 FSVVNVKGPELLSKYIGASEEN 83
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +2
Query: 437 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 616
V GL+ K ++E++ LP K P++F + A PKGVLL+GPPGTGKT++ R VA + T
Sbjct: 318 VAGLEGAKKALREIVVLPFKRPDVFTGIR-APPKGVLLFGPPGTGKTMIGRCVASQCKAT 376
Query: 617 FIRVSGSELVQKFIGRRQQ 673
F +S S L K++G ++
Sbjct: 377 FFNISASSLTSKWVGEGEK 395
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 413 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 589
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 590 AVAHHTECTFIRVSGSELVQKFIGRRQQ 673
AVA+ T FI V G EL+ ++G ++
Sbjct: 587 AVANETGMNFISVKGPELLNMYVGESER 614
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 607
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 608 ECTFIRVSGSELVQKFIGRRQQ 673
++++ +ELV G ++
Sbjct: 264 AIPMLQLAATELVSGVSGETEE 285
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 413 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 589
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 590 AVAHHTECTFIRVSGSELVQKFIGRRQQ 673
AVA+ T F V G EL+ ++G ++
Sbjct: 587 AVANETGMNFFSVKGPELLNMYVGESER 614
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 607
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 608 ECTFIRVSGSELVQKFIGRRQQ 673
++++ +ELV G ++
Sbjct: 264 AIPMLQLAATELVSGVSGETEE 285
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 604
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 605 ----TECTFIRVSGSELVQKFIGRRQQ 673
+ F G++ + K++G ++
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESER 476
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 604
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 447
Query: 605 ----TECTFIRVSGSELVQKFIGRRQQ 673
+ F G++ + K++G ++
Sbjct: 448 RRGANKVAFFMRKGADCLSKWVGESER 474
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 604
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 605 ----TECTFIRVSGSELVQKFIGRRQQ 673
+ F G++ + K++G ++
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESER 476
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 604
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 605 ----TECTFIRVSGSELVQKFIGRRQQ 673
+ F G++ + K++G ++
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESER 476
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 604
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 447
Query: 605 ----TECTFIRVSGSELVQKFIGRRQQ 673
+ F G++ + K++G ++
Sbjct: 448 RRGANKVAFFMRKGADCLSKWVGESER 474
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 604
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 605 ----TECTFIRVSGSELVQKFIGRRQQ 673
+ F G++ + K++G ++
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESER 476
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 604
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 605 ----TECTFIRVSGSELVQKFIGRRQQ 673
+ F G++ + K++G ++
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESER 476
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 74.1 bits (174), Expect = 9e-14
Identities = 35/89 (39%), Positives = 54/89 (60%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 607
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 608 ECTFIRVSGSELVQKFIGRRQQNGARALS 694
C FI + S L K+ G Q+ A S
Sbjct: 139 GCRFINLQVSNLTDKWYGESQKLAAAVFS 167
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 74.1 bits (174), Expect = 9e-14
Identities = 35/89 (39%), Positives = 54/89 (60%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 607
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 608 ECTFIRVSGSELVQKFIGRRQQNGARALS 694
C FI + S L K+ G Q+ A S
Sbjct: 142 GCRFINLQVSNLTDKWYGESQKLAAAVFS 170
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 73.3 bits (172), Expect = 2e-13
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Frame = +2
Query: 365 LPNKVDPLVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 535
L N VD ++ ++++V D+T + V G ++E + LP +P LF G+ QP
Sbjct: 153 LLNGVDKVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFK--GLRQP 210
Query: 536 -KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG 661
KG+LL+GPPG GKTLLA+AVA ++ F +S S L K++G
Sbjct: 211 VKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVG 253
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +AR PSIIF+DEI+SI
Sbjct: 263 FQIARNAQPSIIFIDEIDSI 282
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/100 (39%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +2
Query: 380 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 556
D L +++EK P+ + + GL+ + +KE + LP+K P+LF G +P +G+LL+G
Sbjct: 102 DKLSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLF--TGNRKPWQGILLFG 158
Query: 557 PPGTGKTLLARAVAHHT-ECTFIRVSGSELVQKFIGRRQQ 673
PPGTGK+ +A+AVA E TF +S S+L+ K++G ++
Sbjct: 159 PPGTGKSYIAKAVATEAGESTFFSISSSDLMSKWLGESEK 198
Score = 35.1 bits (77), Expect = 0.054
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +AREH PSIIF+DEI+S+
Sbjct: 204 FALAREHKPSIIFIDEIDSL 223
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +2
Query: 446 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 625
+D+ E++E+++ +K PE + LG PKGVLL GPPGTGKTLLARA+A + F
Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFH 264
Query: 626 VSGSELVQKFIGR 664
+GSE + +G+
Sbjct: 265 TAGSEFDEVLVGQ 277
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/75 (46%), Positives = 47/75 (62%)
Frame = +2
Query: 437 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 616
V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 295 VAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVP 353
Query: 617 FIRVSGSELVQKFIG 661
FI VSGSE ++ F+G
Sbjct: 354 FITVSGSEFLEMFVG 368
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F MAR+++P I+F+DEI+++
Sbjct: 378 FSMARKNSPCILFIDEIDAV 397
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/89 (37%), Positives = 55/89 (61%)
Frame = +2
Query: 410 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 589
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 590 AVAHHTECTFIRVSGSELVQKFIGRRQQN 676
AVA + F+ V G EL+ K++G+ ++N
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEEN 540
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/89 (37%), Positives = 55/89 (61%)
Frame = +2
Query: 410 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 589
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 590 AVAHHTECTFIRVSGSELVQKFIGRRQQN 676
AVA + F+ V G EL+ K++G+ ++N
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEEN 540
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/89 (37%), Positives = 55/89 (61%)
Frame = +2
Query: 410 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 589
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 590 AVAHHTECTFIRVSGSELVQKFIGRRQQN 676
AVA + F+ V G EL+ K++G+ ++N
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEEN 540
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 607
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 608 ECTFIRVSGSELVQ 649
FI ++GSE V+
Sbjct: 343 TVPFISMNGSEFVE 356
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +2
Query: 428 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 607
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 608 ECTFIRVSGSELVQ 649
FI ++GSE V+
Sbjct: 343 TVPFISMNGSEFVE 356
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +2
Query: 416 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 586
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 587 RAVAHHTECTFIR-VSGSELVQKFIGRRQQN 676
R + + V+G +++ K++G + N
Sbjct: 348 RQIGKMLNAREPKIVNGPQILDKYVGESESN 378
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +2
Query: 416 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 586
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 587 RAVAHHTECTFIR-VSGSELVQKFIGRRQQN 676
R + + V+G +++ K++G + N
Sbjct: 348 RQIGKMLNAREPKIVNGPQILDKYVGESESN 378
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +2
Query: 416 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 586
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 222 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 281
Query: 587 RAVAHHTECTFIR-VSGSELVQKFIGRRQQN 676
R + + V+G +++ K++G + N
Sbjct: 282 RQIGKMLNAREPKIVNGPQILDKYVGESESN 312
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 431 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 604
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 605 TECTFIRVSGSELVQKFIG 661
+ TF VS ++L K+ G
Sbjct: 250 SSSTFFTVSSTDLSSKWRG 268
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +AR +APSIIF+DEI+++
Sbjct: 278 FELARFYAPSIIFIDEIDTL 297
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 431 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 604
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 605 TECTFIRVSGSELVQKFIG 661
+ TF VS ++L K+ G
Sbjct: 250 SSSTFFTVSSTDLSSKWRG 268
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +AR +APSIIF+DEI+++
Sbjct: 278 FELARFYAPSIIFIDEIDTL 297
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 431 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 604
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 605 TECTFIRVSGSELVQKFIG 661
+ TF VS ++L K+ G
Sbjct: 250 SSSTFFTVSSTDLSSKWRG 268
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 691 FVMAREHAPSIIFMDEINSI 750
F +AR +APSIIF+DEI+++
Sbjct: 278 FELARFYAPSIIFIDEIDTL 297
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +2
Query: 536 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 643
+ V+ YGPPGTGKTL A+++A H+ + ++G ++
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDI 378
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 521 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 640
G+ +G L YGPPGTGK+ A+A H + +S SE
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSE 232
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 521 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 640
G+ +G L YGPPGTGK+ A+A H + +S SE
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSE 278
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARAVAHH 604
+LL GPPGTGKT L + +A H
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQH 195
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 491 VKHPELFDALGIAQPKGVLLYGPPGTGKTL-LARAVAHHTECTFIRVSGS 637
V+H E+ A +A+ K ++L GPPG+GKT+ L A+ E + V+ S
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTMTLLAALRSQQEMEVVNVNFS 2565
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 491 VKHPELFDALGIAQPKGVLLYGPPGTGKTL-LARAVAHHTECTFIRVSGS 637
V+H E+ A +A+ K ++L GPPG+GKT+ L A+ E + V+ S
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTMTLLAALRSQQEMEVVNVNFS 2565
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 536 KGVLLY--GPPGTGKTLLARAVAHHTECTFIRVS 631
KG++L GPPG GKT +A+A+A F RVS
Sbjct: 328 KGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVS 361
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 31.1 bits (67), Expect = 0.87
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 545 LLYGPPGTGKTLLARAVAHH 604
L+ GPPGTGKT+++ + +H
Sbjct: 464 LIQGPPGTGKTVVSATIVYH 483
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 31.1 bits (67), Expect = 0.87
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 545 LLYGPPGTGKTLLARAVAHH 604
L+ GPPGTGKT+++ + +H
Sbjct: 464 LIQGPPGTGKTVVSATIVYH 483
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 536 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 640
K +LL GP G GK+ LAR VA + I V+ S+
Sbjct: 331 KMLLLSGPAGLGKSTLARIVARQAGYSTIDVNASD 365
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARAVAHHTECTFIRVS 631
+L+ G PGTGK+ L + VA FI VS
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLGFVFIEVS 41
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 602 GERQHELIMSFQCPEAHTVRLLLVAQSQGHQTALGASQAAQSPL 471
G H++I + P +++ A S+GH A AS+ AQ P+
Sbjct: 213 GVAPHQVIQQVRAPNIGASQMVQQAPSRGHTGAAPASRMAQQPV 256
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 602 GERQHELIMSFQCPEAHTVRLLLVAQSQGHQTALGASQAAQSPL 471
G H++I + P +++ A S+GH A AS+ AQ P+
Sbjct: 213 GVAPHQVIQQVRAPNIGASQMVQQAPSRGHTGAAPASRMAQQPV 256
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 206 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 292
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 206 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 292
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARAVA 598
+L YGPPGTGKT A A
Sbjct: 65 LLFYGPPGTGKTTTVLAAA 83
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARA 592
+L YGPPGTGKT A A
Sbjct: 51 LLFYGPPGTGKTSAALA 67
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 536 KGVLLYGPPGTGKTLLARAVAHHTECTFIR--VSGSELVQKFIGRRQ 670
K + +GPPG GKT +A+++A + R V G V + G R+
Sbjct: 506 KILCFHGPPGVGKTSIAKSIATALNREYFRFSVGGMTDVAEIKGHRR 552
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 512 DALGIAQPKGVLLYGPPGTGKTLL 583
D I P+G+ LYG G GKT+L
Sbjct: 83 DTPKIISPRGIYLYGSVGCGKTML 106
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 536 KGVLLYGPPGTGKTLLARAVA 598
+ VL+ GPP TGKT +A A++
Sbjct: 83 RAVLIAGPPATGKTAIALAMS 103
>Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical
protein T08G11.4 protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 302 NDVTANCRVALRNESYTLHK-ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 478
N++T C V HK IL N ++ M+EK P+ST+E + K K IK+
Sbjct: 155 NELTKQCEVMKPIYPIDQHKDILENPDYQQITKTMIEKNPESTFEDI--YTKHCKLIKKQ 212
Query: 479 IE 484
E
Sbjct: 213 SE 214
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 542 VLLYGPPGTGKTLLARAVAHHTECTFIRVS 631
+LL G P +GKT ARA++ T + +S
Sbjct: 475 LLLSGAPDSGKTTWARAISRACHVTHVHIS 504
>AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear receptor
NHR-18 protein.
Length = 392
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 296 DINDVTANC-RVALRN-ESYTLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 466
D D T N +V N Y + K+ L N L LM + + ++ + KQI +
Sbjct: 316 DALDATENLVQVQANNLHKYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIAD 374
Query: 467 IKEVIELPVKHPELFDA 517
+ ++++ HPE+F+A
Sbjct: 375 VFNIMKIDFSHPEMFEA 391
>AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 18 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 296 DINDVTANC-RVALRN-ESYTLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 466
D D T N +V N Y + K+ L N L LM + + ++ + KQI +
Sbjct: 318 DALDATENLVQVQANNLHKYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIAD 376
Query: 467 IKEVIELPVKHPELFDA 517
+ ++++ HPE+F+A
Sbjct: 377 VFNIMKIDFSHPEMFEA 393
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,925,680
Number of Sequences: 27780
Number of extensions: 349164
Number of successful extensions: 1256
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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