Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0380
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q18GW7 Cluster: Membrane metallopeptidase; n=2; Halobac...    33   5.4  
UniRef50_Q9VV30 Cluster: CG13060-PA; n=3; Diptera|Rep: CG13060-P...    33   9.4  

>UniRef50_Q18GW7 Cluster: Membrane metallopeptidase; n=2;
           Halobacteriaceae|Rep: Membrane metallopeptidase -
           Haloquadratum walsbyi (strain DSM 16790)
          Length = 224

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LVCSIQGRLAQLIFAAPSAFSHQSRI-DIQHSPGFISAPLSYAPVTSIF 144
           L  +I   LA  IFAAP A  HQ R+   QH    ++ P++ A +T IF
Sbjct: 102 LFLAIVSSLAGFIFAAPGAVHHQGRVTSRQHGLIALAGPVTNAILTVIF 150


>UniRef50_Q9VV30 Cluster: CG13060-PA; n=3; Diptera|Rep: CG13060-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 131

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
 Frame = +1

Query: 13  IQGRLAQLIFAAPSAFSHQSRIDIQHSPGFIS---APL----SYA-PVTSIFSGKAGSKE 168
           +  ++  ++ +APSA SHQS   + HS   +    AP+    +Y+ P  ++ +       
Sbjct: 30  VLAKVGSVVHSAPSAVSHQSITQV-HSKAVVQPVVAPIVKTTTYSHPAVAVHAAPVVHSV 88

Query: 169 TIL--SPVITETYLTPIAFGYFHNLPLSRALEHPVSL 273
            ++  +PV+   +  P+     H+ PL +++ H   L
Sbjct: 89  PVVHAAPVVHSVHSAPVVHSVLHSAPLVKSVVHSAPL 125


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,197,502
Number of Sequences: 1657284
Number of extensions: 12098955
Number of successful extensions: 26936
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26929
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)