Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0380
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.47 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.6  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 337 SRLLLYHQHLSFCQRFGFELFVGRLDVLTPLTTVNCENIQKLSVSGMS 194
           S  +L +   SF Q F F +  G+   + PL  V+ +N+Q++ +   S
Sbjct: 18  SDAVLAYPQPSFHQTFSFVVIFGQFFGIMPLHGVSRKNVQEIRLEWKS 65


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -3

Query: 369 VIFLICMFILFHAFSCIINIFH 304
           V FL+C +  ++AF  ++ +++
Sbjct: 94  VHFLLCTYYFYYAFIILLCVYY 115


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 358 NLHVYLVSRLLLYHQHLSF 302
           N H++  S LL++  HL F
Sbjct: 125 NRHIFRTSVLLIFVMHLMF 143


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 358 NLHVYLVSRLLLYHQHLSF 302
           N H++  S LL++  HL F
Sbjct: 125 NRHIFRTSVLLIFVMHLMF 143


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 628 HFSNXSSSITKNILKCAF 681
           H+ N  +   KN+LKC +
Sbjct: 365 HWLNKGAEQAKNVLKCVW 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,124
Number of Sequences: 336
Number of extensions: 3290
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)