Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0380
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128190-1|AAI28191.1|  177|Homo sapiens transmembrane protein 1...    31   5.5  
BC128189-1|AAI28190.1|  177|Homo sapiens transmembrane protein 1...    31   5.5  
AF442729-1|AAL35294.1|  177|Homo sapiens MDAC1 protein.                31   5.5  

>BC128190-1|AAI28191.1|  177|Homo sapiens transmembrane protein 190
           protein.
          Length = 177

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 1   LVCSIQGRLAQLIFAAPSAFSHQSRIDIQHSPGFISAPLSYAPVTSIFSGKAGSKET 171
           LV +  G L  L+  +   F    R D+ H PGF++ P   +   S+ S   G+K+T
Sbjct: 84  LVWTCSGLL--LLSCSICLFWWAKRRDVLHMPGFLAGPCDMSKSVSLLSKHRGTKKT 138


>BC128189-1|AAI28190.1|  177|Homo sapiens transmembrane protein 190
           protein.
          Length = 177

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 1   LVCSIQGRLAQLIFAAPSAFSHQSRIDIQHSPGFISAPLSYAPVTSIFSGKAGSKET 171
           LV +  G L  L+  +   F    R D+ H PGF++ P   +   S+ S   G+K+T
Sbjct: 84  LVWTCSGLL--LLSCSICLFWWAKRRDVLHMPGFLAGPCDMSKSVSLLSKHRGTKKT 138


>AF442729-1|AAL35294.1|  177|Homo sapiens MDAC1 protein.
          Length = 177

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 1   LVCSIQGRLAQLIFAAPSAFSHQSRIDIQHSPGFISAPLSYAPVTSIFSGKAGSKET 171
           LV +  G L  L+  +   F    R D+ H PGF++ P   +   S+ S   G+K+T
Sbjct: 84  LVWTCSGLL--LLSCSICLFWWAKRRDVLHMPGFLAGPCDMSKSVSLLSKHRGTKKT 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,514,301
Number of Sequences: 237096
Number of extensions: 1735036
Number of successful extensions: 6089
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6089
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)