Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0380
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071377-1|AAL48999.1|  131|Drosophila melanogaster RE40431p pro...    33   0.52 
AE014296-2696|AAF49492.1|  131|Drosophila melanogaster CG13060-P...    33   0.52 
BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p pro...    31   1.6  
AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p pro...    31   1.6  
AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA ...    31   1.6  
AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA...    31   1.6  
AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p pro...    30   3.7  

>AY071377-1|AAL48999.1|  131|Drosophila melanogaster RE40431p
           protein.
          Length = 131

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
 Frame = +1

Query: 13  IQGRLAQLIFAAPSAFSHQSRIDIQHSPGFIS---APL----SYA-PVTSIFSGKAGSKE 168
           +  ++  ++ +APSA SHQS   + HS   +    AP+    +Y+ P  ++ +       
Sbjct: 30  VLAKVGSVVHSAPSAVSHQSITQV-HSKAVVQPVVAPIVKTTTYSHPAVAVHAAPVVHSV 88

Query: 169 TIL--SPVITETYLTPIAFGYFHNLPLSRALEHPVSL 273
            ++  +PV+   +  P+     H+ PL +++ H   L
Sbjct: 89  PVVHAAPVVHSVHSAPVVHSVLHSAPLVKSVVHSAPL 125


>AE014296-2696|AAF49492.1|  131|Drosophila melanogaster CG13060-PA
           protein.
          Length = 131

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
 Frame = +1

Query: 13  IQGRLAQLIFAAPSAFSHQSRIDIQHSPGFIS---APL----SYA-PVTSIFSGKAGSKE 168
           +  ++  ++ +APSA SHQS   + HS   +    AP+    +Y+ P  ++ +       
Sbjct: 30  VLAKVGSVVHSAPSAVSHQSITQV-HSKAVVQPVVAPIVKTTTYSHPAVAVHAAPVVHSV 88

Query: 169 TIL--SPVITETYLTPIAFGYFHNLPLSRALEHPVSL 273
            ++  +PV+   +  P+     H+ PL +++ H   L
Sbjct: 89  PVVHAAPVVHSVHSAPVVHSVLHSAPLVKSVVHSAPL 125


>BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p
           protein.
          Length = 2016

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +1

Query: 82  IQHSPGFISAPLSYAPVTSIFSGKAGSKETILSPVITETYLTPIAFGYFHNLPLSRA 252
           +Q+ PG ++AP    P ++  +   G+  T ++P +T +   P     F ++PL  A
Sbjct: 687 VQNPPGQVAAPTVAVPQSAPIAPPPGTSSTSVAPPLTASIANPPPTSGFASVPLFAA 743


>AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p
           protein.
          Length = 939

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 85  QHSPGFISAPLSYAPVTSIFSGKA--GSKETILSPVITETYLTPIAFGYF 228
           +H P  + A ++ A VTS+++     G    IL   +T+T LTP +F +F
Sbjct: 637 KHMPNHLRAKVNVADVTSMYTAICILGPYSRILLSELTDTDLTPKSFPFF 686


>AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA
           protein.
          Length = 939

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 85  QHSPGFISAPLSYAPVTSIFSGKA--GSKETILSPVITETYLTPIAFGYF 228
           +H P  + A ++ A VTS+++     G    IL   +T+T LTP +F +F
Sbjct: 637 KHMPNHLRAKVNVADVTSMYTAICILGPYSRILLSELTDTDLTPKSFPFF 686


>AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA
           protein.
          Length = 2016

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +1

Query: 82  IQHSPGFISAPLSYAPVTSIFSGKAGSKETILSPVITETYLTPIAFGYFHNLPLSRA 252
           +Q+ PG ++AP    P ++  +   G+  T ++P +T +   P     F ++PL  A
Sbjct: 687 VQNPPGQVAAPTVAVPQSAPIAPPPGTSSTSVAPPLTASIANPPPTSGFASVPLFAA 743


>AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p
           protein.
          Length = 1332

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +1

Query: 85  QHSPGFISAPLSYAPVTSIFSGKAGSKETILSPVITETYLTPIAFGYFHNLPLSRA 252
           Q+ PG ++AP    P ++  +   G+  T ++P +T +   P     F ++PL  A
Sbjct: 4   QNPPGQVAAPTVAVPQSAPIAPPPGTSSTSVAPPLTASIANPPPTSGFASVPLFAA 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,478,373
Number of Sequences: 53049
Number of extensions: 530203
Number of successful extensions: 958
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)