Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0375
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821 50 2e-06
04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348 37 0.013
03_02_0200 - 6360682-6362517,6362599-6362670 34 0.091
09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254 33 0.21
05_03_0657 + 16694833-16694963,16695567-16695684,16696280-166963... 33 0.21
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520... 31 0.84
09_03_0012 - 11514244-11514797,11515045-11515205,11515943-11516004 30 2.0
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 30 2.0
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 29 2.6
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 29 3.4
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 29 3.4
03_06_0119 - 31799809-31800350,31800522-31801257,31801355-31801843 29 3.4
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846... 29 4.5
07_03_1315 - 25722757-25722876,25722972-25723328,25723924-257245... 29 4.5
07_03_1009 + 23274632-23274841,23274956-23275084,23275207-23275599 29 4.5
05_03_0202 - 9874205-9874762 29 4.5
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203... 28 6.0
05_03_0090 - 8330283-8330831 28 6.0
02_02_0183 + 7576901-7576908,7577666-7578176 28 6.0
12_01_0799 + 7329394-7330125 28 7.9
11_04_0458 - 17923596-17923805,17924034-17924950,17925044-17925236 28 7.9
11_04_0377 + 16977586-16977843 28 7.9
06_01_0732 + 5397217-5397327,5399010-5399831 28 7.9
03_05_1032 - 29861859-29862011,29862347-29862470,29862557-298627... 28 7.9
01_05_0619 - 23737178-23737378,23737460-23737516,23737597-237377... 28 7.9
>08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821
Length = 716
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/93 (33%), Positives = 43/93 (46%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D+NDPNYDS+ E + V ED + P+I EYF GD AA + +
Sbjct: 110 DRNDPNYDSD---EEPYELVEAPVSTPVEDYKKSVAPIIEEYFSTGDVKLAASDLKELGY 166
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
+ + +A+D EMASVL+S L
Sbjct: 167 DDFHRYFVKKLVSMAMDRHDKEKEMASVLLSSL 199
>04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348
Length = 662
Score = 37.1 bits (82), Expect = 0.013
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 385 EEY-VEDQND-PNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAE 558
E+Y +ED + P+ S + NG+ + V A +D R PVI EYF GD AA
Sbjct: 54 EQYNLEDVDSVPSKMSNKLVNGNNK-----VPATLDDYKRLLVPVIEEYFSTGDVELAAS 108
Query: 559 EFLDFVTAARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
E + + + +A+D EMAS+L+S L
Sbjct: 109 ELRSLGSDQFHSYFIKKLISMAMDRHDKEKEMASILLSAL 148
>03_02_0200 - 6360682-6362517,6362599-6362670
Length = 635
Score = 34.3 bits (75), Expect = 0.091
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 496 RKSEPVILEYFEHGDTNAAAEEFLDFVTAARSHLVCETIGEIALDHKAMHCEMASVLISD 675
RK+ ++ EYF D A A E + + + + +A+D EMA+VL+S
Sbjct: 44 RKATTILEEYFSTDDVAATANELRELRVPCYHYYFVKKLVSVAMDRHDREKEMAAVLLSS 103
Query: 676 L 678
L
Sbjct: 104 L 104
>09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254
Length = 425
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -2
Query: 433 PPPNRSSDRSGPPRTPRASQIRADPTRLCLPP-HLSSVTPCRGHCVVFGCSSSYDISGAA 257
PPP + PR P A+ + + PP +L+S T + + +SS + +
Sbjct: 253 PPPRNLVSTTPVPRNPIAANVASSSVAAASPPRNLASTTKVSQNSIAANLASSSVSATST 312
Query: 256 SQRSARPCC 230
+ R A P C
Sbjct: 313 ASRGAAPAC 321
>05_03_0657 +
16694833-16694963,16695567-16695684,16696280-16696376,
16700126-16700232,16700473-16700595,16700791-16700944,
16701237-16701297,16701417-16701781,16701875-16703483,
16703697-16703940
Length = 1002
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 97 VDRIASDSEN-VAMDEKPVVEQGAGDAATSNPERLRRKNKKYARSNSKDGPSAVTPLP 267
VD +D N ++ + P+V+ DA+TS+P + ++K+ N D ++ TPLP
Sbjct: 492 VDTADTDHHNELSQADHPMVDSDVADASTSSPSSIVSESKESTDKNDSD--TSKTPLP 547
>03_06_0326 +
33150599-33150907,33151013-33151104,33151961-33152057,
33152585-33152656,33152750-33152812,33152905-33153045,
33153603-33153698,33154120-33154404,33154692-33154851,
33154947-33155089,33155688-33155861,33156386-33156652,
33156737-33156856
Length = 672
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 613 QLSRTPDDSSRRSQSLGTPRRPRS 542
Q SR+P DS S S G+PRR RS
Sbjct: 19 QRSRSPSDSEEASDSSGSPRRSRS 42
>09_03_0012 - 11514244-11514797,11515045-11515205,11515943-11516004
Length = 258
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/66 (37%), Positives = 30/66 (45%)
Frame = +3
Query: 393 RGGPERSELRFGGGHQRRHRIQAGHSRSGARGYYP*IGACDIRVF*AWRHERGRRGVPRL 572
RGG GG Q R + G R+GA G + GA R RH R RRG RL
Sbjct: 98 RGGRWTVTPGVDGGAQERV-VGGGRRRAGAGGGWRHAGAGGRR-----RHRRARRGAVRL 151
Query: 573 CDRREE 590
RR++
Sbjct: 152 RRRRQQ 157
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 157 QGAGDAATSNPERLRRKNKKYARSNSKDGPSAVTPLPKYRSWKNSRRPRN 306
+G + + +P R R + + Y+RS S+ + +P R+ + SR PR+
Sbjct: 136 RGRSYSRSPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRD 185
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 339 GGRQRRVGSARI*DARGVRGGPERSELRFGGGHQRRHR 452
GG+ RR+G + +G+ G PE SE GG + + R
Sbjct: 118 GGQTRRMGKRKTIVQKGMLGKPEPSEKTRGGSQRAKKR 155
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 85 AAMEVDRIASDSENVAMDEKPVVEQGAGDAATSNPERLRRKNKKYARSNSKDGPSAVTP 261
A D +S E +DE VVE G D ++ + ++K +K R K P +P
Sbjct: 63 AGFAADAFSSGDE---IDEDAVVELGEADPSSRKRRKEKKKRRKEKRKQRKGAPPEGSP 118
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 658 RPFRSASPCDPTLSPQLSRTPDDSSRRSQSLGTPRRPRS 542
+P RS+ C P SP+++ +P SSR +P PRS
Sbjct: 307 QPSRSSPECSPIPSPRMT-SPGPSSRVHSGSVSPLHPRS 344
>03_06_0119 - 31799809-31800350,31800522-31801257,31801355-31801843
Length = 588
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 334 LSSVTPCRGHCVVFGCSSSYDISGAAS 254
+SS T GH + F SS+ D SGAA+
Sbjct: 93 MSSFTDLAGHGIAFAVSSTRDFSGAAA 119
>08_02_0731 -
20483518-20484154,20484182-20484375,20484541-20484640,
20485282-20485622
Length = 423
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -2
Query: 451 RCRRW*PPPNRSSDRSGPPRTPRASQIRADPT 356
R RW PP RSS PP +PR RA PT
Sbjct: 276 RLSRWLHPPRRSSS-PVPPPSPRRILRRARPT 306
>07_03_1315 -
25722757-25722876,25722972-25723328,25723924-25724500,
25724577-25725265,25725487-25725822,25726190-25726527,
25726619-25726746,25726906-25727030,25727547-25727589,
25727714-25727802,25728396-25728511,25729157-25729276,
25729752-25729794
Length = 1026
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 142 KPVVEQGAGDAATSNPERLRRKNKKYARSNSKDG--PSAVTPLPKYRSWKNSR 294
K VVE G D S+ L + K A+ DG +AV K+R WK +
Sbjct: 803 KKVVEYGDDDCGLSDERTLSLVSIKNAKPGQNDGSHSAAVRIQNKFRGWKGRK 855
>07_03_1009 + 23274632-23274841,23274956-23275084,23275207-23275599
Length = 243
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 109 ASDSENVAMDEKPVVEQGAGDAATSNPERLRR 204
A+D+E +PV +G+G AAT+ E+ RR
Sbjct: 175 AADAEVTNTPRRPVEARGSGSAATTRMEKSRR 206
>05_03_0202 - 9874205-9874762
Length = 185
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +3
Query: 327 EERWGGRQRRVGSARI*DARGVRGGPERSELRFGGGHQRRHRIQAGHSRSGAR 485
EER G RQ R R RGG + G G R ++A + G R
Sbjct: 108 EEREGRRQERASGGHRAKRRAGRGGGGGGDAGGGDGAAGRRTVEAAQAAGGGR 160
>07_01_0276 +
2028983-2029070,2030084-2030151,2030317-2031246,
2031334-2031415,2031544-2031609,2032606-2033304,
2033422-2035424,2035599-2036173,2037060-2037223,
2037306-2037365,2037475-2037839
Length = 1699
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 585 EESSGVRDNWGDSVGSQGDALR 650
+ES RD WGDS G GDA R
Sbjct: 176 KESENWRDRWGDS-GKDGDAAR 196
>05_03_0090 - 8330283-8330831
Length = 182
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 427 PNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSV 323
P SS RSGPP PR ++IR P + P + V
Sbjct: 2 PRLSSSRSGPPH-PRWAKIRQGPATSSVTPTKTKV 35
>02_02_0183 + 7576901-7576908,7577666-7578176
Length = 172
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 348 QRRVGSARI*DARGVRGGPERSELRF-GGGHQRRHRIQAGHSRSGARGYYP*IGACDIR 521
+RR G R RG GG R R GGG +RR R G AR + CD R
Sbjct: 27 RRRYGGGRWEYGRGGGGGWIRRPARQRGGGGRRRRRRCGGGGGGAARWIRQPLARCDRR 85
>12_01_0799 + 7329394-7330125
Length = 243
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 191 SGLDVAASPAPCSTTGFSSIA-TFSESEAMRSTSIAATVRFIL*NMDFNT 45
SG +VAA+P+P + G IA T E + R + +R + + NT
Sbjct: 16 SGSNVAATPSPSAVVGNGDIASTAQEMQRARYFTFVMLIRMVQEKIPHNT 65
>11_04_0458 - 17923596-17923805,17924034-17924950,17925044-17925236
Length = 439
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +1
Query: 133 MDEKPVVEQGAGDAATSNPERLRRKNKKYARSNSKDGPSAVTPLPKYRS 279
+D++ VVE G+G ++P R+ + + + D S P+ Y++
Sbjct: 28 LDKEKVVEGGSGSGTRTSPRFTRQSSNRPVQIRDGDSGSRENPVRLYKT 76
>11_04_0377 + 16977586-16977843
Length = 85
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 136 DEKPVVEQGAGDAATSNPERLRRKNKK 216
DEK ++EQ AAT+ E LRRKN++
Sbjct: 4 DEKTILEQQIA-AATARLEELRRKNRE 29
>06_01_0732 + 5397217-5397327,5399010-5399831
Length = 310
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 303 QWPRQGVTEERWGGRQRRVGSARI*DARGVRGGPERSELRFGGGHQRRHRIQAGHSR 473
Q P++ EE GG G R + R S+ GGHQ H+ + H+R
Sbjct: 89 QLPKEEAEEEAGGGAAAAAGETRRFECHYCRRNFPTSQAL--GGHQNAHKRERQHAR 143
>03_05_1032 -
29861859-29862011,29862347-29862470,29862557-29862759,
29863081-29863199,29863489-29863623,29863695-29863950,
29864749-29864880,29865001-29865222
Length = 447
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = +2
Query: 269 NIVAGRTAEDHAMATAGGYRRKVGREAKACGV 364
N A A A A AGG RRK GR A A GV
Sbjct: 11 NGAAPAPAPAAAAAAAGGKRRKRGRWAAAAGV 42
>01_05_0619 -
23737178-23737378,23737460-23737516,23737597-23737755,
23739477-23739621,23739725-23740136,23740693-23740855
Length = 378
Score = 27.9 bits (59), Expect = 7.9
Identities = 39/143 (27%), Positives = 50/143 (34%)
Frame = +3
Query: 240 RAERCDAAPEIS*LEEQPKTTQWPRQGVTEERWGGRQRRVGSARI*DARGVRGGPERSEL 419
+A A+P+ + + P P Q V E R G R G+ R GP R
Sbjct: 28 KAAAAAASPKPAAQAKLPTKPPPPAQAVKESRNYGAPAREGAGR--------NGPGRGSG 79
Query: 420 RFGGGHQRRHRIQAGHSRSGARGYYP*IGACDIRVF*AWRHERGRRGVPRLCDRREESSG 599
FGGG + R +G G Y GA R E R R R+ G
Sbjct: 80 GFGGGRIGQRRDFGEGDTNGVEGGY---GASGFGDGIVRREEGEHRPSERGHGPRQPYRG 136
Query: 600 VRDNWGDSVGSQGDALRNGLGPH 668
G + G GD +G PH
Sbjct: 137 GGRRGGYTGGEAGD--ESGRAPH 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.129 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,287,998
Number of Sequences: 37544
Number of extensions: 413970
Number of successful extensions: 1543
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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