Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0375
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031049-1|AAH31049.1| 469|Homo sapiens programmed cell death 4... 59 2e-08
BC026104-1|AAH26104.1| 469|Homo sapiens programmed cell death 4... 59 2e-08
AL158163-5|CAH72815.1| 469|Homo sapiens programmed cell death 4... 59 2e-08
AL158163-4|CAH72814.1| 231|Homo sapiens programmed cell death 4... 59 2e-08
AL136368-4|CAI40095.1| 469|Homo sapiens programmed cell death 4... 59 2e-08
AL136368-3|CAI40094.1| 231|Homo sapiens programmed cell death 4... 59 2e-08
AK223623-1|BAD97343.1| 469|Homo sapiens programmed cell death 4... 59 2e-08
U83908-1|AAB42218.1| 458|Homo sapiens nuclear antigen H731 prot... 58 4e-08
U96628-1|AAB67706.1| 469|Homo sapiens nuclear antigen H731-like... 57 5e-08
BC015036-1|AAH15036.1| 201|Homo sapiens PDCD4 protein protein. 44 7e-04
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 34 0.54
AL953897-19|CAI15894.1| 953|Homo sapiens chloride channel 6 pro... 33 0.71
AL021155-10|CAI23405.1| 953|Homo sapiens chloride channel 6 pro... 33 0.71
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 32 2.2
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 31 2.9
AK123755-1|BAC85688.1| 258|Homo sapiens rCS1a) mRNA. protein. 30 6.6
AK128575-1|BAC87507.1| 308|Homo sapiens protein ( Homo sapiens ... 30 8.8
AK127495-1|BAC87006.1| 288|Homo sapiens protein ( Homo sapiens ... 30 8.8
AF171063-1|AAF14544.1| 824|Homo sapiens DEAD box RNA helicase G... 30 8.8
AF036943-1|AAF14051.1| 1192|Homo sapiens myelin transcription fa... 30 8.8
>BC031049-1|AAH31049.1| 469|Homo sapiens programmed cell death 4
(neoplastic transformation inhibitor) protein.
Length = 469
Score = 58.8 bits (136), Expect = 2e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 137 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 193
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM S L+SDL
Sbjct: 194 GEMKSGVPVLAVSLALEGKASHREMTSKLLSDL 226
>BC026104-1|AAH26104.1| 469|Homo sapiens programmed cell death 4
(neoplastic transformation inhibitor) protein.
Length = 469
Score = 58.8 bits (136), Expect = 2e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 137 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 193
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM S L+SDL
Sbjct: 194 GEMKSGVPVLAVSLALEGKASHREMTSKLLSDL 226
>AL158163-5|CAH72815.1| 469|Homo sapiens programmed cell death 4
(neoplastic transformation inhibitor) protein.
Length = 469
Score = 58.8 bits (136), Expect = 2e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 137 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 193
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM S L+SDL
Sbjct: 194 GEMKSGVPVLAVSLALEGKASHREMTSKLLSDL 226
>AL158163-4|CAH72814.1| 231|Homo sapiens programmed cell death 4
(neoplastic transformation inhibitor) protein.
Length = 231
Score = 58.8 bits (136), Expect = 2e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 123 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 179
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM S L+SDL
Sbjct: 180 GEMKSGVPVLAVSLALEGKASHREMTSKLLSDL 212
>AL136368-4|CAI40095.1| 469|Homo sapiens programmed cell death 4
(neoplastic transformation inhibitor) protein.
Length = 469
Score = 58.8 bits (136), Expect = 2e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 137 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 193
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM S L+SDL
Sbjct: 194 GEMKSGVPVLAVSLALEGKASHREMTSKLLSDL 226
>AL136368-3|CAI40094.1| 231|Homo sapiens programmed cell death 4
(neoplastic transformation inhibitor) protein.
Length = 231
Score = 58.8 bits (136), Expect = 2e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 123 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 179
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM S L+SDL
Sbjct: 180 GEMKSGVPVLAVSLALEGKASHREMTSKLLSDL 212
>AK223623-1|BAD97343.1| 469|Homo sapiens programmed cell death 4
isoform 1 variant protein.
Length = 469
Score = 58.8 bits (136), Expect = 2e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 137 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 193
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM S L+SDL
Sbjct: 194 GEMKSGVPVLAVSLALEGKASHREMTSKLLSDL 226
>U83908-1|AAB42218.1| 458|Homo sapiens nuclear antigen H731
protein.
Length = 458
Score = 57.6 bits (133), Expect = 4e-08
Identities = 33/93 (35%), Positives = 46/93 (49%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 126 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 182
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM + L+SDL
Sbjct: 183 GEMKSGVPVLAVSLALEGKASHREMTTKLLSDL 215
>U96628-1|AAB67706.1| 469|Homo sapiens nuclear antigen H731-like
protein protein.
Length = 469
Score = 57.2 bits (132), Expect = 5e-08
Identities = 33/93 (35%), Positives = 45/93 (48%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLDFVT 579
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 137 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNL 193
Query: 580 AARSHLVCETIGEIALDHKAMHCEMASVLISDL 678
V +AL+ KA H EM S +SDL
Sbjct: 194 GEMKSGVPVLAVSLALEGKASHREMTSKFLSDL 226
>BC015036-1|AAH15036.1| 201|Homo sapiens PDCD4 protein protein.
Length = 201
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 400 DQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLD 570
D DPNYD + + ++ V++ + + P+I EYFEHGDTN AE D
Sbjct: 137 DVKDPNYDDD---QENCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRD 190
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 33.9 bits (74), Expect = 0.54
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = -2
Query: 655 PFRSASPCDPTLSPQLSRTPDDSS-RRSQSLGTPRRPRSCLHAQNTLISQAPIYG*YPRA 479
P S + PT SP +RTP +S R+ +P R + T + +P PRA
Sbjct: 95 PTASPARTPPTESP--ARTPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRT-PPRA 151
Query: 478 PLRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLS 329
R P R PP S R+ P +PR + RA PTR PP S
Sbjct: 152 SPRRTPP--RASPTRTPPRASPKRTPPRASPRRTPPRASPTR--APPRAS 197
Score = 32.3 bits (70), Expect = 1.6
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 5/120 (4%)
Frame = -2
Query: 655 PFRSASPCDPTLSPQLS---RTPDDSS-RRSQSLGTPRRPRSCLHAQNTLISQAPIYG*Y 488
P R+ S PT +P + RTP +S R+ +P+R + T +P
Sbjct: 135 PRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASPKRTPPRASPRRTPPRASPTRAPP 194
Query: 487 PRAPLRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSV-TPCR 311
+P R P R PP S R+ P +P + RA PTR PP S TP R
Sbjct: 195 RASPKRTPPTASPTRT---PPRASPTRTPPTESPARTPPRASPTR--TPPTESPARTPSR 249
>AL953897-19|CAI15894.1| 953|Homo sapiens chloride channel 6 protein.
Length = 953
Score = 33.5 bits (73), Expect = 0.71
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = -2
Query: 475 LRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTP 317
L L PA + C R P P +D + P +SQ RA TRLCLPP + TP
Sbjct: 886 LALNPARLPCTRD-PFPCLPADGTSVPLAVLSSQSRAS-TRLCLPPEMLLFTP 936
>AL021155-10|CAI23405.1| 953|Homo sapiens chloride channel 6 protein.
Length = 953
Score = 33.5 bits (73), Expect = 0.71
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = -2
Query: 475 LRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTP 317
L L PA + C R P P +D + P +SQ RA TRLCLPP + TP
Sbjct: 886 LALNPARLPCTRD-PFPCLPADGTSVPLAVLSSQSRAS-TRLCLPPEMLLFTP 936
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
Length = 1569
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 664 GPRPFRSASPCDPTLSPQLSRTPDDSSRRSQSLGTPRRPRSCLHAQNT 521
GP P + +P PT +P L T SS+ + S G P RP + + Q T
Sbjct: 1236 GPSPSSNHTPASPTQTPLLPATL-TSSKPTASSGEPPRPTTAVTPQAT 1282
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 31.5 bits (68), Expect = 2.9
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = -2
Query: 655 PFRSASPCDPTLSPQLSRTPDDSSRRSQSLGTPRRPRSCLHAQNTLISQAPIYG*YPRAP 476
P R+ PT +P + +P + + GTP R +++P R P
Sbjct: 122 PMRTPPRASPTGTPSTA-SPTGTPSSASPTGTPPRASPTGTPPRAWATRSPSTASLTRTP 180
Query: 475 LRL*PA*IRCRRW*PPPNRSSDRSGPPR-TPRASQIRADPTRLCLPPHLS 329
R RW P R+S PPR +PR S RA PTR PP S
Sbjct: 181 SRA-----SLTRW---PPRASPTRTPPRESPRMSH-RASPTR--TPPRAS 219
>AK123755-1|BAC85688.1| 258|Homo sapiens rCS1a) mRNA. protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -2
Query: 433 PPPNRSSDRSGPPRTPRASQIRADP 359
PPP RS SGPPR PR S A P
Sbjct: 65 PPPVRSLS-SGPPRAPRLSPAGASP 88
>AK128575-1|BAC87507.1| 308|Homo sapiens protein ( Homo sapiens
cDNA FLJ46734 fis, clone TRACH3020563. ).
Length = 308
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 321 VTEERWGGRQRRVGSARI*DARGVRGGPERSELRFGGGHQRRHRIQAGHSRSG 479
V+ E W R R VG+ R+ + GP S+L G G R GH+R G
Sbjct: 48 VSAETW--RTRGVGAGRLVTGPALASGPPCSQLYNGQGSPRTISWGLGHTRVG 98
>AK127495-1|BAC87006.1| 288|Homo sapiens protein ( Homo sapiens
cDNA FLJ45588 fis, clone BRTHA3014507. ).
Length = 288
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 321 VTEERWGGRQRRVGSARI*DARGVRGGPERSELRFGGGHQRRHRIQAGHSRSG 479
V+ E W R R VG+ R+ + GP S+L G G R GH+R G
Sbjct: 48 VSAETW--RTRGVGAGRLVTGPALASGPPCSQLYNGQGSPRTISWGLGHTRVG 98
>AF171063-1|AAF14544.1| 824|Homo sapiens DEAD box RNA helicase
Gemin3 protein.
Length = 824
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 67 KINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSNPERLRRKNKKYARSNSKDGP 246
K N++ D DSE+ +D++ +EQ T NPE+ + ++ K+G
Sbjct: 668 KGNKSYLESSSDNQLKDSESTPVDDRISLEQPPNGTDTPNPEKYQESPGIQMKTRLKEGA 727
Query: 247 S 249
S
Sbjct: 728 S 728
>AF036943-1|AAF14051.1| 1192|Homo sapiens myelin transcription
factor 1-like protein.
Length = 1192
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 385 EEYVEDQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEE 561
EEY ED ++P + E GD E ++ I E E ED E V E E + EE
Sbjct: 108 EEYSEDNDEPGDEDEEDEEGDREEEEEI-EEEDEDDDEDGEDVEDEEEEEEEEEEEEEE 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.129 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,653,912
Number of Sequences: 237096
Number of extensions: 2001951
Number of successful extensions: 6393
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6341
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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