Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0375
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 30 1.3
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 29 3.1
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 29 3.1
U41542-14|ABO16444.1| 331|Caenorhabditis elegans Hsn abnormal m... 29 3.1
U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal m... 29 3.1
U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal m... 29 3.1
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 3.1
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 3.1
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.1
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 4.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 5.4
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z93397-8|CAB07716.2| 545|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 28 7.1
AL132904-27|CAC35854.1| 545|Caenorhabditis elegans Hypothetical... 28 7.1
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 7.1
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 27 9.4
U58751-3|AAN84880.1| 667|Caenorhabditis elegans Pctaire class c... 27 9.4
U58751-2|AAL00852.1| 700|Caenorhabditis elegans Pctaire class c... 27 9.4
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 27 9.4
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 27 9.4
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.3
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = -2
Query: 655 PFRSASPCD-PTLSPQLSRTPDDSSRRSQSLGTPRRPR-SCLHAQNTLISQAPIYG*YPR 482
P R P P+ SP R D +RS+S PRR R S + IS++P+ R
Sbjct: 77 PKRKREPIRAPSASPPRRRRDDSPRKRSRS--PPRRTRRSPSPPRRRRISRSPVRR--SR 132
Query: 481 APLRL*PA*IRCRRW*PPPNRSS-DRSGPPRTPRASQIRA 365
+P R + R R PPP R RS PP R Q R+
Sbjct: 133 SPPRRQVS--RSRS--PPPRRQQRSRSPPPAKRRRDQSRS 168
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 397 PRTPRASQIRADPTRLCLPPHLSSVTPCRGHCVVFGCSSSYD--ISGAASQRSARPCC*N 224
P TP P +CLP ++ + R CV G +YD I A +R + C
Sbjct: 311 PSTPACPAPGCQPGCICLPGYIRRDSSPRSACVPRGLCQAYDLTIRCADEKRQYQTCGSA 370
Query: 223 ERISCS 206
ISC+
Sbjct: 371 CPISCA 376
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 397 PRTPRASQIRADPTRLCLPPHLSSVTPCRGHCVVFGCSSSYD--ISGAASQRSARPCC*N 224
P TP P +CLP ++ + R CV G +YD I A +R + C
Sbjct: 102 PSTPACPAPGCQPGCICLPGYIRRDSSPRSACVPRGLCQAYDLTIRCADEKRQYQTCGSA 161
Query: 223 ERISCS 206
ISC+
Sbjct: 162 CPISCA 167
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 52 KSIFHKINRTVAAMEVDRIASDS---ENVAMDEKPVVEQGAGDAATSNPERLRRKNKKYA 222
K + K R +AA + +++ +D E + + VEQ GD ++S + ++K K
Sbjct: 496 KKLTKKEKRLMAAQKANQLETDDDVLEAAYRERQKHVEQAGGDYSSSGQKDQKKKRGK-- 553
Query: 223 RSNSKDGPSAVTP 261
R S PS ++P
Sbjct: 554 RPVSNPPPSLISP 566
>U41542-14|ABO16444.1| 331|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform c protein.
Length = 331
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 385 EEYVEDQNDPNYDSEAV--TNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEH 534
++ ++ N +YD V T DI+F+ + P +I K+EP EH
Sbjct: 141 KDSIQSSNISDYDDLEVQTTEEDIKFEVESSDVSPRSVIVKTEPTFKRELEH 192
>U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform a protein.
Length = 390
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 385 EEYVEDQNDPNYDSEAV--TNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEH 534
++ ++ N +YD V T DI+F+ + P +I K+EP EH
Sbjct: 200 KDSIQSSNISDYDDLEVQTTEEDIKFEVESSDVSPRSVIVKTEPTFKRELEH 251
>U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform b protein.
Length = 392
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 385 EEYVEDQNDPNYDSEAV--TNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEH 534
++ ++ N +YD V T DI+F+ + P +I K+EP EH
Sbjct: 202 KDSIQSSNISDYDDLEVQTTEEDIKFEVESSDVSPRSVIVKTEPTFKRELEH 253
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 433 PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTPCRG 308
PP ++ PP+ R Q R+ P +PP + S P G
Sbjct: 529 PPVHQQPPPQQPPQQQRQKQQRSQPAPARVPPQVPSQVPVTG 570
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 433 PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTPCRG 308
PP ++ PP+ R Q R+ P +PP + S P G
Sbjct: 529 PPVHQQPPPQQPPQQQRQKQQRSQPAPARVPPQVPSQVPVTG 570
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1
Query: 37 CLTVLKSIFHKINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSNPERLRRKNKK 216
C +++ HK+N T+A + V + +EN +E G +S+ +R N
Sbjct: 26 CADLIEKELHKLNATIARVPVGEFVAYAENAVKNETDSEAVG-----SSSVKRENSANDS 80
Query: 217 YARSNSKDGPSAVTPLPKYRSWKN 288
A +N D S+ + R KN
Sbjct: 81 PANTNDVDIVSSPVKRGRGRKAKN 104
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1
Query: 37 CLTVLKSIFHKINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSNPERLRRKNKK 216
C +++ HK+N T+A + V + +EN +E G +S+ +R N
Sbjct: 26 CADLIEKELHKLNATIARVPVGEFVAYAENAVKNETDSEAVG-----SSSVKRENSANDS 80
Query: 217 YARSNSKDGPSAVTPLPKYRSWKN 288
A +N D S+ + R KN
Sbjct: 81 PANTNDVDIVSSPVKRGRGRKAKN 104
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 655 PFRSASPCDPTLSPQLSRTPDDSSRRSQSLGTPRRPRSCLHAQNTLISQAP 503
P R SP SP+ R+P SSR PRRPR Q + ++P
Sbjct: 488 PRRRQSP-QRRRSPRRRRSPSSSSRSRSPPPPPRRPRQDSEQQAPVAVKSP 537
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 427 PNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTPC 314
P +++ R P +T R PT+ LP +L S T C
Sbjct: 123 PEQATPRQSPTKTTRPVFTTKTPTKTSLPYNLESGTSC 160
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +1
Query: 373 SEML--EEYVEDQNDPNYDSEAVTNGDIEFKQV 465
+EML E+ V ++++ +YD E NG+I FK V
Sbjct: 354 AEMLIKEDNVIEKDETDYDVEVEVNGNISFKNV 386
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +1
Query: 391 YVEDQNDPNYD-SEAVTNGDIEFKQVIVEAE--PEDIIR---KSEPVILEYFEHGDTNAA 552
Y++D DP S + + +I F V+++ + P+D +++ +LE E+ DT+
Sbjct: 743 YIKDARDPILIMSFKIWDTEIYFPNVVIDMQCIPQDFATLDIETQEYLLELIENQDTSTL 802
Query: 553 AEEFLDFVTAARSHL 597
+ D + R HL
Sbjct: 803 ETDDQDLIWQKRLHL 817
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +1
Query: 391 YVEDQNDPNYD-SEAVTNGDIEFKQVIVEAE--PEDIIR---KSEPVILEYFEHGDTNAA 552
Y++D DP S + + +I F V+++ + P+D +++ +LE E+ DT+
Sbjct: 743 YIKDARDPILIMSFKIWDTEIYFPNVVIDMQCIPQDFATLDIETQEYLLELIENQDTSTL 802
Query: 553 AEEFLDFVTAARSHL 597
+ D + R HL
Sbjct: 803 ETDDQDLIWQKRLHL 817
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 376 EMLEEYVEDQNDPNYDSEAVTNGDIEFKQVIVEAEPED 489
E+LEEY D+ + + D ++V + D+E + V+ EP +
Sbjct: 858 EVLEEY-GDEEEEDIDMKSVESSDVEEESVMEVLEPSE 894
>Z93397-8|CAB07716.2| 545|Caenorhabditis elegans Hypothetical
protein ZC482.2 protein.
Length = 545
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 40 LTVLKSIFHKINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSN-PERLRRKNKK 216
+ LK F+ N ++ ++ V +D E + V A +T ERL++KN
Sbjct: 88 MRTLKGGFNIENTSLTSLSV--FTADKEKGNFNVVGVGNSAAAMTSTKLLAERLKQKNGV 145
Query: 217 YARSNSK-DGPSAVTPLPKYR 276
Y R+NS+ + PS + L YR
Sbjct: 146 YIRNNSQLNDPSVLYDLYLYR 166
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 330 ERWGGRQRRVGSARI*DARGVRGGPERSELRFGGGHQRR-HRIQAGHSRSGARG 488
+R+GG +R G D G GG R+GGG RR + G RSG G
Sbjct: 197 DRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYGGGGGRRGSPDRRGGFRSGGGG 250
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +1
Query: 100 DRIASDSENVAMDEKPVVE-QGAGDAATS----NPERLRRKNKKYARSNSKDGPSAVTPL 264
DR +E+V PV + +G G + T NP + R + RS S++ P
Sbjct: 241 DRRDIKNEDVKTRGSPVKKTRGTGRSRTPEAILNPRKQRTPVNHHKRSKSQETKLVAMPS 300
Query: 265 PKYRSWKNSRRPRN 306
P ++ N+ R RN
Sbjct: 301 PNSMAYYNTSRARN 314
>Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical
protein F37H8.1 protein.
Length = 284
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 421 DSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLD 570
++ +V G IE ++ E E EDI S+P + ++H +A +E+ D
Sbjct: 103 EASSVGVGPIEDDDIVEEEEEEDIRLTSKPCVKRRYDH---HAEEQEYRD 149
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +1
Query: 100 DRIASDSENVAMDEKPVVE-QGAGDAATS----NPERLRRKNKKYARSNSKDGPSAVTPL 264
DR +E+V PV + +G G + T NP + R + RS S++ P
Sbjct: 241 DRRDIKNEDVKTRGSPVKKTRGTGRSRTPEAILNPRKQRTPVNHHKRSKSQETKLVAMPS 300
Query: 265 PKYRSWKNSRRPRN 306
P ++ N+ R RN
Sbjct: 301 PNSMAYYNTSRARN 314
>AL132904-27|CAC35854.1| 545|Caenorhabditis elegans Hypothetical
protein ZC482.2 protein.
Length = 545
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 40 LTVLKSIFHKINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSN-PERLRRKNKK 216
+ LK F+ N ++ ++ V +D E + V A +T ERL++KN
Sbjct: 88 MRTLKGGFNIENTSLTSLSV--FTADKEKGNFNVVGVGNSAAAMTSTKLLAERLKQKNGV 145
Query: 217 YARSNSK-DGPSAVTPLPKYR 276
Y R+NS+ + PS + L YR
Sbjct: 146 YIRNNSQLNDPSVLYDLYLYR 166
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -2
Query: 433 PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTPCRG 308
PPP +S+ + GPP A + T P ++ P G
Sbjct: 29 PPPPKSASKMGPPPPAPAPPTAPEATPAAPAPDAAAAAPAEG 70
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.5 bits (58), Expect = 9.4
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = -2
Query: 658 RPFRSASPCDPTLSPQLSRTPDDSSRRSQSLGTPRRPRSCLHAQNTLISQ-APIYG*YPR 482
RP R A P SR P SR + + PR+ + ++ T++++ AP R
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313
Query: 481 APLRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADP 359
AP+ PA R P P R G P P A+ +A+P
Sbjct: 314 APV---PA-----RSAPAPPR-----GAPAKPAANTAKAEP 341
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.5 bits (58), Expect = 9.4
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = -2
Query: 658 RPFRSASPCDPTLSPQLSRTPDDSSRRSQSLGTPRRPRSCLHAQNTLISQ-APIYG*YPR 482
RP R A P SR P SR + + PR+ + ++ T++++ AP R
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313
Query: 481 APLRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADP 359
AP+ PA R P P R G P P A+ +A+P
Sbjct: 314 APV---PA-----RSAPAPPR-----GAPAKPAANTAKAEP 341
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.5 bits (58), Expect = 9.4
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = -2
Query: 658 RPFRSASPCDPTLSPQLSRTPDDSSRRSQSLGTPRRPRSCLHAQNTLISQ-APIYG*YPR 482
RP R A P SR P SR + + PR+ + ++ T++++ AP R
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313
Query: 481 APLRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADP 359
AP+ PA R P P R G P P A+ +A+P
Sbjct: 314 APV---PA-----RSAPAPPR-----GAPAKPAANTAKAEP 341
>U58751-3|AAN84880.1| 667|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform c protein.
Length = 667
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 376 EMLEEYVEDQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAA 555
E +E ED+ + D + D+E++ E + +DI+ + E + E EH T
Sbjct: 99 EDFDEEEEDEFEDASDRRNLDEDDVEYED---EDDEDDIVVEEEEITPEDIEHSPTGVTT 155
Query: 556 E 558
+
Sbjct: 156 Q 156
>U58751-2|AAL00852.1| 700|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform b protein.
Length = 700
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 376 EMLEEYVEDQNDPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAA 555
E +E ED+ + D + D+E++ E + +DI+ + E + E EH T
Sbjct: 132 EDFDEEEEDEFEDASDRRNLDEDDVEYED---EDDEDDIVVEEEEITPEDIEHSPTGVTT 188
Query: 556 E 558
+
Sbjct: 189 Q 189
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/63 (22%), Positives = 23/63 (36%)
Frame = +1
Query: 79 TVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSNPERLRRKNKKYARSNSKDGPSAVT 258
T + E +SE KP + T+ E +K+ K + +K+ T
Sbjct: 202 TTTSSETSETTEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTT 261
Query: 259 PLP 267
P P
Sbjct: 262 PEP 264
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 299 GLRLFFQLRYFGSGVTALGPSLLLERAYFLFLRRNRSGLDVAASPAPCSTT--GFSSIAT 126
GL+ FF FG G + SLL+ER + ++++ + +P C+ ++SI T
Sbjct: 129 GLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILT 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.129 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,492,261
Number of Sequences: 27780
Number of extensions: 303533
Number of successful extensions: 956
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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