Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0365
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   3.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.0  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   9.2  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 478 HCSGKIDLLFSPKYCRC*PYQWLLKLET 561
           H    I+L FSP  CR  P +W ++ +T
Sbjct: 70  HLERTIELTFSPADCRL-PPRWTIRNDT 96


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 145 HVTIIGIFNKWH 110
           HV I G FN WH
Sbjct: 117 HVVIAGDFNAWH 128


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 432 PVHSTLIPYPVQVFGTLQWKNRPV 503
           P+   LI   ++  G+L WKN+PV
Sbjct: 71  PLLRPLINIFLKTDGSLLWKNKPV 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,237
Number of Sequences: 2352
Number of extensions: 15479
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)