Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0365
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical pr...    31   0.60 
Z81052-4|CAB02870.1|  328|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z77654-4|CAB01131.2|  151|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U80031-5|AAB37615.1|  547|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl...    29   3.2  
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ...    29   3.2  
Z83216-11|CAB05679.2|  404|Caenorhabditis elegans Hypothetical p...    29   4.2  
AF036706-16|AAM97947.1|  139|Caenorhabditis elegans Hypothetical...    29   4.2  
AF036706-15|AAK39285.1|  145|Caenorhabditis elegans Hypothetical...    29   4.2  
Z46676-2|CAA86662.1|  507|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z81117-8|CAB03316.2|  334|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical
           protein R11G10.2 protein.
          Length = 576

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +3

Query: 294 NAGQITKCRTIGILQSLNGRYYLTELDKPNLIPEFRIQVSMVYLKEPVHSTLIPYPVQVF 473
           + GQ+ +   +     LN ++ L ++ KP+LI  +RI    V L  P+   L+ Y    F
Sbjct: 492 DGGQMIRVDIVDDEMQLNEKF-LIDMKKPSLIQNYRIFKKSVCLMPPIQKYLLDYNTTYF 550

Query: 474 GT 479
            T
Sbjct: 551 YT 552


>Z81052-4|CAB02870.1|  328|Caenorhabditis elegans Hypothetical
           protein D2023.5 protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -1

Query: 175 QNYRRYVFKMHVTIIGIFNKWHFYF---AIYCKILWSSKYSKIINNVGY 38
           Q YR  +F+ +  ++G+ NK HF F     +  +L++SK + I  + G+
Sbjct: 92  QQYRADLFEEYAQMVGLNNKEHFIFYGKGAFGGMLFASKVAWIFKSYGH 140


>Z77654-4|CAB01131.2|  151|Caenorhabditis elegans Hypothetical
           protein C50B8.4 protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 401 NSSVYGLPQRTCTFNPNTISSTSFWYTAVEKSTCYFRQNTAD 526
           N++ Y +   T TFNPN  +S  F  T V++ +       AD
Sbjct: 16  NNNYYNIIAETTTFNPNPNASIDFVVTQVDRLSNQINSLVAD 57


>U80031-5|AAB37615.1|  547|Caenorhabditis elegans Hypothetical
           protein B0554.2 protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 372 PVRLNNSARLSSVVFQWFYISLFVQHSIHKLFS 274
           P  +  +A  SSV  QW+Y+++F   +I +L +
Sbjct: 31  PASVTVNAECSSVDMQWYYVTVFQGQTIRRLMT 63


>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
           protein 23 protein.
          Length = 1043

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 246 FYTYYNLDNLRKVCELNAGQITKC 317
           FY   N D +RKVCEL    +T C
Sbjct: 358 FYVPPNSDTVRKVCELEPVMLTNC 381


>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1073

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 246 FYTYYNLDNLRKVCELNAGQITKC 317
           FY   N D +RKVCEL    +T C
Sbjct: 388 FYVPPNSDTVRKVCELEPVMLTNC 411


>Z83216-11|CAB05679.2|  404|Caenorhabditis elegans Hypothetical
           protein C08F11.13 protein.
          Length = 404

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -1

Query: 118 KWHFYFAIYCKILWSSKYSKIINNVGYVML---TVFWIL 11
           KW+ +F +   ++WSS    +I  VG V+    ++FW L
Sbjct: 333 KWYLWFLLINCVIWSSIPLYVIGKVGNVVFSPNSLFWAL 371


>AF036706-16|AAM97947.1|  139|Caenorhabditis elegans Hypothetical
           protein T07A9.12b protein.
          Length = 139

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/58 (29%), Positives = 31/58 (53%)
 Frame = -2

Query: 333 VFQWFYISLFVQHSIHKLFSGCLNCSMYKNQSKTYCIFLKLFELI*TWLHVPCRITED 160
           +F+   I+LF+   + K+ SG L  S   N++    +FL ++ L+ +W    CR T +
Sbjct: 83  IFRLTCITLFIYFIVEKI-SGELEKSEVANRNTYGMVFLPMWLLLASWGFQMCRATNN 139


>AF036706-15|AAK39285.1|  145|Caenorhabditis elegans Hypothetical
           protein T07A9.12a protein.
          Length = 145

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/58 (29%), Positives = 31/58 (53%)
 Frame = -2

Query: 333 VFQWFYISLFVQHSIHKLFSGCLNCSMYKNQSKTYCIFLKLFELI*TWLHVPCRITED 160
           +F+   I+LF+   + K+ SG L  S   N++    +FL ++ L+ +W    CR T +
Sbjct: 89  IFRLTCITLFIYFIVEKI-SGELEKSEVANRNTYGMVFLPMWLLLASWGFQMCRATNN 145


>Z46676-2|CAA86662.1|  507|Caenorhabditis elegans Hypothetical
           protein C08B11.2 protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = +3

Query: 258 YNLDNLRKVCELNAGQITKCRTIGILQ--SLNGRYYLTELDKPNLIPEFRIQVSMVYLKE 431
           Y L N+ +   L  G I   R    +   SL   Y+   L +PNL+P+     S  YL  
Sbjct: 324 YTLRNVARCWALETGVILGLRMDDEIPGTSLYSHYFTPRLLRPNLVPKMNDANSAAYLAS 383

Query: 432 PVHSTL 449
               TL
Sbjct: 384 IEKETL 389


>Z81117-8|CAB03316.2|  334|Caenorhabditis elegans Hypothetical
           protein T06E6.7 protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = -1

Query: 226 YIFEII*TYLNLASRSMQNYRRYVFKMHVTIIGIFNKWHFYFAIYCKILWSSKYSKIINN 47
           Y++ +I  YLN  ++S  NY    F  H     +   W +           + Y+K++N 
Sbjct: 250 YLYIVISCYLNYHNQSANNYTIVSFSFHGITSSMILLWTY-----------NPYTKVVNA 298

Query: 46  VGYVMLTV 23
           + Y +LT+
Sbjct: 299 IFYRILTL 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,727,111
Number of Sequences: 27780
Number of extensions: 361424
Number of successful extensions: 907
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)