Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0364
         (785 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3WI66 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_Q4D1F4 Cluster: Putative uncharacterized protein; n=2; ...    34   3.5  
UniRef50_Q9NKP1 Cluster: Protein kinase, putative; n=2; Leishman...    33   6.1  
UniRef50_Q4Z4M7 Cluster: Putative uncharacterized protein; n=2; ...    33   8.1  
UniRef50_Q4Y729 Cluster: Putative uncharacterized protein; n=2; ...    33   8.1  

>UniRef50_A3WI66 Cluster: Putative uncharacterized protein; n=1;
           Erythrobacter sp. NAP1|Rep: Putative uncharacterized
           protein - Erythrobacter sp. NAP1
          Length = 398

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +3

Query: 87  ERGSGGGVVAQEPTTQVPLTASNKHHRARDHVNFFFLFATHLASVFVTVLYTSLMRIFNN 266
           ERG GGG    + T  +PL    +  R  D++++F L   + A+   TV+  SL+ +   
Sbjct: 184 ERGQGGGGADDDDTVFMPLKTVQRRFRGSDNIDYFVL--KYNAAYSATVIQDSLIDLLRE 241

Query: 267 NNI 275
             +
Sbjct: 242 RRV 244


>UniRef50_Q4D1F4 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 1134

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 66  RRTLPTNERGSGGGVVAQEPTTQVPLTASNKHHRARDHV 182
           RR+LP +ERGS  G V   P+T + +  S+ HH   +++
Sbjct: 766 RRSLPCSERGSRSGSVLVRPSTHLLIGLSDGHHELFEYL 804


>UniRef50_Q9NKP1 Cluster: Protein kinase, putative; n=2;
            Leishmania|Rep: Protein kinase, putative - Leishmania
            major
          Length = 3112

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 15/26 (57%), Positives = 15/26 (57%)
 Frame = +3

Query: 48   ANLSCPRRTLPTNERGSGGGVVAQEP 125
            A LSCP   LP N  GSGGG V   P
Sbjct: 1694 ATLSCPNTQLPANGSGSGGGSVVLVP 1719


>UniRef50_Q4Z4M7 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 418

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +3

Query: 177 HVNFFFLFATHLASVFVTVLYTSLMRIFNN 266
           ++NFFFL A    ++F+++LY  L +I+ N
Sbjct: 380 YINFFFLVALFSINIFISLLYLILSKIYRN 409


>UniRef50_Q4Y729 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 466

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 174 DHVNFFFLFATHLASVFVTVLYTSLMRIFNN 266
           D++NF FL A    ++F+++LY  L +I+ N
Sbjct: 359 DYINFLFLVALFSINIFISLLYLILSKIYRN 389


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,197,754
Number of Sequences: 1657284
Number of extensions: 11391147
Number of successful extensions: 28896
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28885
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)