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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0364
         (785 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1 f...    30   2.0  
At4g11000.1 68417.m01789 ankyrin repeat family protein contains ...    28   6.1  
At5g43880.1 68418.m05366 expressed protein                             28   8.1  

>At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1
           family protein similar to SP|Q9LD45 Bax inhibitor-1
           (BI-1) (AtBI-1) {Arabidopsis thaliana}; contains Pfam
           profile PF01027: Uncharacterized protein family UPF0005
          Length = 247

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 159 HHRARDHVNFFFLFATHLASVFVTVLYTSLMR 254
           HH   D+V   F F T  AS+FV +L  ++ R
Sbjct: 205 HHGDMDYVQHSFTFFTDFASLFVQILVLNMFR 236


>At4g11000.1 68417.m01789 ankyrin repeat family protein contains
           ankyrin repeats, Pfam:PF00023
          Length = 406

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 555 KWSLVFGTILMGKCERLLVYNSXFTSSYLYYNYIS 659
           KW L++G++       L  Y++ F SSY   +Y+S
Sbjct: 326 KWKLLYGSVAALSIAALASYSTIFPSSYDANSYLS 360


>At5g43880.1 68418.m05366 expressed protein
          Length = 836

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
 Frame = +1

Query: 25  YLGPFESKPTSPARGAP-----CRPTNEALAEAWS 114
           Y  PF S P S A G+P     CR   + L+E W+
Sbjct: 357 YDSPFSSSPFSRASGSPESSSVCREAKKRLSERWA 391


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,703,969
Number of Sequences: 28952
Number of extensions: 250844
Number of successful extensions: 531
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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