Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0363
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24) 38 0.007
SB_53596| Best HMM Match : F5_F8_type_C (HMM E-Value=1.3e-21) 33 0.25
SB_45915| Best HMM Match : CRAM_rpt (HMM E-Value=9.1e-20) 33 0.33
SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086) 32 0.43
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 32 0.57
SB_10801| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 31 0.76
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 30 1.7
SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19) 30 1.7
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_56512| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.3
SB_980| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 29 5.3
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 5.3
SB_42487| Best HMM Match : Extensin_2 (HMM E-Value=0.084) 28 7.0
SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 28 7.0
SB_4139| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_54691| Best HMM Match : SWIRM (HMM E-Value=0.0033) 28 9.3
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)
Length = 429
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +3
Query: 216 EACRYVRGAWSECDSK--TNIRSRKLTLKKGD-PANCEVVKTIQKKCK-RTC-RYEKSSW 380
E R+ GAWSEC S + +R+R ++ K D N E K+C C + W
Sbjct: 53 ECPRWTAGAWSECSSTCGSGVRTRFVSCKPRDGTCNSEDKPDAYKECDVMECPTWSVGQW 112
Query: 381 SECSIN-GEMSRTDKLKSNSDSTCDQSRRKTRK--CN 482
S CS+ G R + + CD+ R+ + CN
Sbjct: 113 SSCSVTCGVGRRLRSVVCSIHGKCDKQRQPSSSTLCN 149
>SB_53596| Best HMM Match : F5_F8_type_C (HMM E-Value=1.3e-21)
Length = 472
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 330 TIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKLAK 509
TI + RT + + E + +G SR ++ S TC+ +R TR CN+ AK
Sbjct: 189 TITRHTDRTHEHTDGT-HEHATHGRNSRRRNTRTRSTRTCNTLKRNTRTCNRRNTTHKAK 247
Query: 510 DK 515
++
Sbjct: 248 NQ 249
>SB_45915| Best HMM Match : CRAM_rpt (HMM E-Value=9.1e-20)
Length = 359
Score = 32.7 bits (71), Expect = 0.33
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Frame = +3
Query: 249 ECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKS----SWSECSINGEMSRT 416
EC+S S T + G CE K ++C+ T E + S SEC E T
Sbjct: 59 ECESTRECES---TRECGSTTKCESTK---EECESTSECESTRECESTSECESTTECEST 112
Query: 417 DKLKSNSDSTCDQSRRKTRKCNKNKQ 494
+ +S S+ TR+C K+
Sbjct: 113 SECESTSECASTTECESTRECESTKE 138
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = +3
Query: 192 SARGAKNREACRYVRGAWS--ECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRY 365
S R ++ C R S EC S T S K + + CE + + +
Sbjct: 50 STRECESTRECESTRECESTRECGSTTKCESTKEECES--TSECESTRECESTSECESTT 107
Query: 366 EKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTR 473
E S SEC E + T + +S + C+ ++ R
Sbjct: 108 ECESTSECESTSECASTTECESTRE--CESTKESVR 141
>SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086)
Length = 627
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 306 PANCEVVKTIQKKC-KRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRR----KT 470
P+ +V K + +KC K TCR+ K +WS+ + S +K K D R K
Sbjct: 471 PSGNKVFKCLNQKCGKETCRHCKENWSD-HFGLKCSEIEK-KGEKDLRISYEERMTMAKI 528
Query: 471 RKCNK 485
RKC+K
Sbjct: 529 RKCHK 533
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 31.9 bits (69), Expect = 0.57
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 318 EVVK--TIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKT-RKCNKN 488
E+VK + K+ K E++ SE ++NG S ++LKS+ +T DQS + +K K
Sbjct: 535 EMVKQSAVVKETKPNNVIEETVESETTVNGLESDPERLKSSQGTTVDQSVKDVPKKKKKG 594
Query: 489 KQ 494
KQ
Sbjct: 595 KQ 596
>SB_10801| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 910
Score = 31.9 bits (69), Expect = 0.57
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = +3
Query: 159 WE-ENDHEVLIRSARGAKNREACRYVRGAWSECDS---KTNIRSRKLTLKKG--DPANCE 320
W+ E+D EVL+R G+ N C VRG EC + + + L +G + C
Sbjct: 619 WKLEDDKEVLVR---GSMNECQCVLVRGLMHECQCVLVRGTMNECQCVLVRGTMNECQCV 675
Query: 321 VVKTIQKKCKRTCRYEKSSWSEC 389
+V+ + +C+ C + S +EC
Sbjct: 676 LVRGLMHECQ--CVLVRGSMNEC 696
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +3
Query: 327 KTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKLA 506
KT +KK K+ + + + E S N E +K + S + ++S+ K + +KNK+ K A
Sbjct: 431 KTDKKKSKKKSKDKSKNKGEKSKNKEEESKNK-EEKSKNKEEESKNKEEE-SKNKEEKRA 488
Query: 507 KDKGR 521
K KG+
Sbjct: 489 KKKGK 493
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 339 KKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKLAKDKG 518
+K K+T +++ + S+ + +TDK KS S D+S+ K K ++ K++
Sbjct: 407 RKRKKTHKHKHAKKSKTEEQTDDGKTDKKKSKKKSK-DKSKNKGEKSKNKEEESKNKEEK 465
Query: 519 RRNRQ 533
+N++
Sbjct: 466 SKNKE 470
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Frame = +3
Query: 150 GEVWEENDHEVLIRSARGAKNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEV-- 323
GE+ + RS K R ++S S+ R++K L K N ++
Sbjct: 675 GEMSSRQSSQSRGRSTEKNKKRRYSESSSDSFSSSSSEDRRRTKKKKLSKHRKNNKDLEL 734
Query: 324 --VKTIQKK--CKRTCRYEKSSWSECSIN-GEMSRTDKLKSNSDSTCDQSRRKTRKCNKN 488
+K ++K+ K++ +Y + S+CS + GE S + + +S + R+K K N+
Sbjct: 735 QPIKKVKKRKETKKSRKYSTTD-SDCSSDDGENSDSSRERSIKKHKKKKKRKKKIKKNRK 793
Query: 489 KQVKLAKDKGRRNRQ 533
K ++ + K +N++
Sbjct: 794 KTME-NESKNEKNKR 807
>SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19)
Length = 3083
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 393 INGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNK 491
+ G+ D++KS C+Q RR R C K K
Sbjct: 2130 VTGDKGVNDEVKSREKRDCEQGRRSKRSCIKYK 2162
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/105 (28%), Positives = 48/105 (45%)
Frame = +3
Query: 198 RGAKNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSS 377
R K R+ R + D+ +++ ++K K+ + C+ + EK
Sbjct: 114 RKDKTRKKKRKHDSSEDSDDNSSDVSAKKKQCKEERKRKRHKLSCESSSCEESSDSEKRL 173
Query: 378 WSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKLAKD 512
E N E R D +S+SDS D+ RRK +K K+K+ K AKD
Sbjct: 174 KKEK--NKEKQR-DSSESSSDSEDDRKRRK-KKVKKDKKQK-AKD 213
>SB_56512| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1219
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/96 (26%), Positives = 41/96 (42%)
Frame = +3
Query: 159 WEENDHEVLIRSARGAKNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQ 338
W+E+ H + R + AK + + ++EC S N + K D NC T
Sbjct: 100 WKESIHSLACRCSAAAKKKGYSFFAIQFYAECWSGPN-TADFAKHGKADDKNCFSELTTD 158
Query: 339 KKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDST 446
K + C +K S EC + + K+K +S S+
Sbjct: 159 VKNRPPC--DKKSEDECVGIDDTNYVYKVKEDSASS 192
>SB_980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 348 KRTCRYEKSSWSECSINGEMSRTDKLKSNSD 440
K C YE S + +I GEM+ D+ K N D
Sbjct: 729 KHVCAYEISGMTRGTIGGEMTVNDEYKYNDD 759
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +3
Query: 330 TIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQV 497
T ++ RTC C+ + +M+RT + + TC + R C ++Q+
Sbjct: 1340 TTHEQMNRTCTTHAKMNRTCTTHEQMNRTYTTHAQMNRTCTTHAQMNRTCTTHEQM 1395
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = +3
Query: 330 TIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKLA 506
T + RTC C+ + +M+RT + TC + R C ++Q+ A
Sbjct: 1400 TTHAQMSRTCTTHAQMNRTCTTHAQMNRTYTTHVQMNRTCTTHEQMNRTCTTHEQMNRA 1458
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +3
Query: 330 TIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQV 497
T ++ RTC C+ + +M+RT + + + TC + R C + Q+
Sbjct: 1490 TTHEQMNRTCTTHAKMNRTCTTHAQMNRTYTIHAQMNRTCTTHAQMNRTCITHAQM 1545
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 270 IRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTC 449
I+S+K T+KK + N + +++K+CK R + +I E++ +
Sbjct: 603 IKSQKETMKKLETENSGLAASLEKECKEVERLKGVDEEIVNIKIELNDVQIKLRETSMEL 662
Query: 450 DQSRRKTRKCNKNKQVKLAK 509
+++ K R K++Q K
Sbjct: 663 GKTQAKNRSLIKHEQALQGK 682
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/81 (20%), Positives = 32/81 (39%)
Frame = +3
Query: 264 TNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDS 443
T S +TL + P + + + +C + C +G ++ +
Sbjct: 1214 TRNTSHGVTLTRNTPRDVTLTCYTSRDVTLSCNTSRGVILTCYTSGGVTLSCNTSHGVTL 1273
Query: 444 TCDQSRRKTRKCNKNKQVKLA 506
TC+ SR T CN ++ V L+
Sbjct: 1274 TCNTSRDVTLSCNTSRDVTLS 1294
>SB_42487| Best HMM Match : Extensin_2 (HMM E-Value=0.084)
Length = 635
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 517 VAEIASKDMGCFENFTIIINEQCLFVDSHLYLSLVPSSYIAKY 645
V +A KD+G + + L D+H LSL+PS K+
Sbjct: 15 VTRVARKDIGLLWPVLGVSRARLLITDTHKVLSLLPSCSFRKF 57
>SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1328
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 273 RSRKLTLKKGDP--ANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKS-NSDS 443
R R L K P AN T Q +T E++S SE + + D ++ +D
Sbjct: 573 RRRYLDAIKEKPVSANSTQTDTAQDGTTKT-EIEETSNSEPTEKSHTDKDDDRQNVETDK 631
Query: 444 TCDQSRRKTRKCNKNKQVKLAKDKGRRNR 530
TC +T KC + ++ K +G +N+
Sbjct: 632 TCSIQNLETNKCRCGETLETDKREGGQNK 660
>SB_4139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 150 GEVWEENDHEVLIRSARGAKNR 215
G WEEND E LI A+GA+NR
Sbjct: 93 GRRWEENDKEGLI--AQGARNR 112
>SB_54691| Best HMM Match : SWIRM (HMM E-Value=0.0033)
Length = 809
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/80 (22%), Positives = 36/80 (45%)
Frame = +3
Query: 270 IRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTC 449
I+S+K T+KK + N + + +K+CK R + +I E++ +
Sbjct: 676 IKSQKETMKKLETENSGLAASFEKECKEVERLKGVDEEIVNIKIELNDVQIKLRETSMEL 735
Query: 450 DQSRRKTRKCNKNKQVKLAK 509
+++ K R K++Q K
Sbjct: 736 GKTQAKNRSLIKHEQALQGK 755
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 27.9 bits (59), Expect = 9.3
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Frame = +3
Query: 225 RYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQ-----KKCKRT-CRYEK----- 371
++ R WS C SKT ++ + A+ TI KKC T CR
Sbjct: 36 KFNRSKWSTC-SKTCGSGKQSRFEPVSGADLCTKGTIAAERKTKKCNLTPCRVNGGWSAY 94
Query: 372 SSWSECSIN---GEMSRT----DKLKSNSDSTCDQSRRKTRKC 479
SSWS C+ + G +RT + SN C +KTRKC
Sbjct: 95 SSWSSCTKSCGGGTQTRTRTCTNPKPSNGGRDCWGDSKKTRKC 137
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,754,832
Number of Sequences: 59808
Number of extensions: 416479
Number of successful extensions: 1269
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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