Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0362
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.28 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 75  LFFIF*HEYFKCCISLINVHLIYCVFIF 158
           LFF+    YF C   +  VHL++ + I+
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCIY 167



 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +3

Query: 72  ILFFIF*HEYFKCCISLINVHLIY--CVFIF 158
           I +F + H  F C   +  +HL++  C++ F
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 75  LFFIF*HEYFKCCISLINVHLIY-CVFIF 158
           L F+    +F C   +  +HL++ C FIF
Sbjct: 160 LLFLLCIYHFFCAFIIFTMHLLFCCAFIF 188



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +3

Query: 93  HEYFKCCISLINVHLIYCVFIF 158
           H  F C   +  VH + C + F
Sbjct: 82  HLLFYCPFIIFTVHFLLCTYYF 103


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 635 NAYILCLIHY 606
           N YILC +HY
Sbjct: 229 NLYILCRLHY 238


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 635 NAYILCLIHY 606
           N YILC +HY
Sbjct: 229 NLYILCRLHY 238


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -1

Query: 582 IMQYYIILTLYVILVYNNCLLGRNMWIK 499
           + ++ I+L + V L++N C    + W++
Sbjct: 53  VQKHLILLMVLVNLIFNTCGEVFSAWVR 80


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 67  SCVSLRTVLERRCAVGWGGR 8
           +CV  +   +  C VGW G+
Sbjct: 113 TCVQNKNQYQCLCGVGWTGK 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,701
Number of Sequences: 336
Number of extensions: 3536
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)