Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0357
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = -1

Query: 132 ELNKNTNFVFPLMCPVGQIPFVCFKFILY 46
           E    T F++  + PV  + F C   +++
Sbjct: 47  EFKTRTYFIYAFVAPVKCLAFFCTALVIF 75


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = -1

Query: 132 ELNKNTNFVFPLMCPVGQIPFVCFKFILY 46
           E    T F++  + PV  + F C   +++
Sbjct: 280 EFKTRTYFIYAFVAPVKCLAFFCTALVIF 308


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = -1

Query: 132 ELNKNTNFVFPLMCPVGQIPFVCFKFILY 46
           E    T F++  + PV  + F C   +++
Sbjct: 280 EFKTRTYFIYAFVAPVKCLAFFCTALVIF 308


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 574 YSYLIRSEYVYVIYTNKM 521
           YSY     Y+Y  Y+ K+
Sbjct: 85  YSYFFYLSYIYTTYSRKL 102


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 574 YSYLIRSEYVYVIYTNKM 521
           YSY     Y+Y  Y+ K+
Sbjct: 41  YSYFFYLSYIYTTYSRKL 58


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 553 EYVYVIYTNKM*NNYQTLHHY 491
           +Y  V+   +  NNYQ+L HY
Sbjct: 506 DYCTVLRVQRF-NNYQSLAHY 525


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,644
Number of Sequences: 336
Number of extensions: 3449
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)