Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0354
(520 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43330.1 68415.m05388 sugar transporter family protein simila... 31 0.47
At5g45060.1 68418.m05525 disease resistance protein (TIR-NBS-LRR... 30 1.1
At4g28200.1 68417.m04042 expressed protein 30 1.1
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 30 1.1
At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-contain... 29 1.4
At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mu... 29 1.4
At2g47310.1 68415.m05906 flowering time control protein-related ... 29 1.4
At4g33530.1 68417.m04765 potassium transporter family protein si... 29 1.9
At5g15110.1 68418.m01770 pectate lyase family protein similar to... 28 4.3
At4g29800.1 68417.m04243 patatin-related low similarity to patat... 28 4.3
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 28 4.3
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 27 5.7
At4g33030.1 68417.m04699 UDP-sulfoquinovose synthase / sulfite:U... 27 7.6
At1g76190.1 68414.m08848 auxin-responsive family protein similar... 27 7.6
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 31.1 bits (67), Expect = 0.47
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 91 TMLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEP 270
T + F + A AVLAV V G T SE+ + W + N S + + SD N++E
Sbjct: 442 TGMTFLILAGIAVLAVIFVIVFVPETQGLTFSEVEQIWKERAYGNISGWGSSSDSNNME- 500
Query: 271 YPLALSEEGNQ 303
L E+G+Q
Sbjct: 501 ---GLLEQGSQ 508
>At5g45060.1 68418.m05525 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1165
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 169 DGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSE 291
DG++IS+LP+N K R + LN D LE P +SE
Sbjct: 734 DGTSISQLPDNVGNLK---RLVLLNMKDCKVLETIPTCVSE 771
>At4g28200.1 68417.m04042 expressed protein
Length = 648
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/81 (25%), Positives = 41/81 (50%)
Frame = +1
Query: 205 DQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTVDQRFDSPQSNGELDNLIMRP 384
+Q KD+N+ LF++ +K E EE ++D + V+ + E + +++
Sbjct: 220 EQWKDENKELFMSLDEKEGNE------KEENDEDSIVEDVEDVTEKVDFLKEKGSNVLQT 273
Query: 385 ELYGEPPAMEGLASAFDLQRR 447
G A+E + S+FDL++R
Sbjct: 274 IYSG---AVEAIPSSFDLRKR 291
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 136 VSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGY- 312
+S PSN+ + SE E + S + D ++ +PYP L+ + D Y
Sbjct: 364 MSRTEVPSNDPSNQSSSETKEKESLEVSSSSSSDMISFDLSNGDPYPPHLAVALDDDQYV 423
Query: 313 DQTVDQRFDSPQSNGELDNLIM 378
+ VD+ D P + E + ++M
Sbjct: 424 EFHVDELADFPSNAEEEERMLM 445
>At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF01852: START domain, PF00169:
PH domain
Length = 718
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 127 VLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQD 306
V+ A + S K G ++ + + DQT NR+ L D +D + + +A SE+ +
Sbjct: 404 VMVNMASSSLSLTKSGKSLHKSAFSLDQTNSVNRNSLLMDEDSDDDDEFQIAESEQEPET 463
Query: 307 GYDQT-VDQRFDSPQSNGEL 363
+T V + + P N +L
Sbjct: 464 SKPETDVKRPEEEPAHNIDL 483
>At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate
mutase family protein similar to X4 protein GI:21386798,
Y4 protein GI:21386800 from [Silene dioica]; contains
Pfam profiles PF00300: phosphoglycerate mutase family,
PF01535: PPR repeat
Length = 1053
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 289 EEGNQDGYDQTVDQRFDSPQSNG-ELDNLIMRPELYGEPPAMEGLASAFDLQRRKRGSGT 465
EE ++ D ++ D+ +SN +LDNL+++ L EP + ASA L + GT
Sbjct: 12 EEEEEEETDNEEEEEEDNGRSNTRQLDNLLVKKVLEQEPEMLPCHASASPLSPQLSSLGT 71
Query: 466 KVXG 477
G
Sbjct: 72 PRLG 75
>At2g47310.1 68415.m05906 flowering time control protein-related /
FCA gamma-related
Length = 512
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 325 DQRFDSPQSNGELDNLIMRPELYGEPPAMEGLASAFDLQRRKRGSGT 465
DQRF+ P +G+ N+I+ PP L++R+ S T
Sbjct: 56 DQRFNQPHYSGQQQNMIVDQSNNAPPPFPPSPCGGSSLRKRRSQSAT 102
>At4g33530.1 68417.m04765 potassium transporter family protein
similar to K+ transporter HAK5 [Arabidopsis thaliana]
GI:7108597; KUP/HAK/KT Transporter family member,
PMID:11500563; contains Pfam profile PF02705: K+
potassium transporter
Length = 855
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +1
Query: 145 VPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTV 324
V S+ DGS I E D T +R +F +K+D E ++E+ + DGYD+
Sbjct: 4 VEEESSGGDGSEIDEEFGGDDSTTSLSRWVF---DEKDDYE-----VNEDYDDDGYDEHN 55
Query: 325 DQRFDSPQSNGELDNLIMR 381
DS + + ++ ++R
Sbjct: 56 HPEMDSDEEDDNVEQRLIR 74
>At5g15110.1 68418.m01770 pectate lyase family protein similar to
pectate lyase P59 SP:P15722 from [Lycopersicon
esculentum]
Length = 472
Score = 27.9 bits (59), Expect = 4.3
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +1
Query: 94 MLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPY 273
M+ S T +AV +PT N ISEL E W Q D+ R L +PY
Sbjct: 3 MVRLSKLMFTFCIAV-LIPTIRGN-----ISELDEYWSQRADEAREFTLQAYHS---DPY 53
Query: 274 PLALSEEGNQDGYDQTVDQRFDSPQSNGELDNLIMRPELYGEPPAMEGLASAFDLQRRK- 450
+ + ++ YD + D +P+ +G+ +PE E +E L S+ + RR
Sbjct: 54 EIV--DHFHERHYDNSTD--VTTPEEDGD-----AKPE-EEEKEFIEMLGSSTNSTRRSL 103
Query: 451 RGSG 462
RG G
Sbjct: 104 RGKG 107
>At4g29800.1 68417.m04243 patatin-related low similarity to patatin
precursor [Solanum brevidens][GI:563125]; contains
Patatin domain PF01743
Length = 525
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 448 KRGSGTKVXGAGAATKXXTKSGSG 519
+ GSG+ GAGAA K +SGSG
Sbjct: 207 RSGSGSGGGGAGAAIKRVIRSGSG 230
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 235 FLNKSDKNDLEPYPLALSEEGNQDGYDQTVDQ-RFDSPQSNGELDNLI 375
+LN S N P P+ LS GN D D + ++ P S G+L++L+
Sbjct: 407 YLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKINGIIPSSLGDLEHLL 454
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles: PF00533
BRCA1 C Terminus (BRCT) domain, PF00004 ATPase family
associated with various cellular activities (AAA)
Length = 956
Score = 27.5 bits (58), Expect = 5.7
Identities = 24/87 (27%), Positives = 38/87 (43%)
Frame = +1
Query: 259 DLEPYPLALSEEGNQDGYDQTVDQRFDSPQSNGELDNLIMRPELYGEPPAMEGLASAFDL 438
D + PLA +EEGN ++ ++ D + L NL R + E ++G S+
Sbjct: 867 DEDGEPLADNEEGNGSDAEEDSEEATDGEKLESNLKNLNAR-GIQVELD-LKGAGSSGSR 924
Query: 439 QRRKRGSGTKVXGAGAATKXXTKSGSG 519
+ +G G +A K T GSG
Sbjct: 925 KAAGKGRGRGKAADTSAEKKATGRGSG 951
>At4g33030.1 68417.m04699 UDP-sulfoquinovose synthase /
sulfite:UDP-glucose sulfotransferase / sulfolipid
biosynthesis protein (SQD1) identical to gi:2736155
Length = 477
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 164 TKMAVPSVNCQKIGIKQKMIT 226
TK +PSV+ +KIG+K K +T
Sbjct: 456 TKQIMPSVSWKKIGVKTKSMT 476
>At1g76190.1 68414.m08848 auxin-responsive family protein similar to
indole-3-acetic acid induced protein ARG7 (SP:P32295)
[Vigna radiata]
Length = 123
Score = 27.1 bits (57), Expect = 7.6
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 163 NKDGSTISELPENWDQTKDDNRSLFLNKSDK----NDLEPYP-LALSEEGNQDGYDQTVD 327
N G +SEL E W + K + +++ N+ + D +P L + + +D + T+D
Sbjct: 5 NSKGIRLSELMEKWRRRKKGHFAVYTNEGKRFVLPLDYLNHPMLQVLLQMAEDEFGTTID 64
Query: 328 QRFDSPQSNGELDNLIM 378
P +D++IM
Sbjct: 65 GPLKVPCDGSLMDHIIM 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.131 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,767,580
Number of Sequences: 28952
Number of extensions: 214332
Number of successful extensions: 508
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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