BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0353 (749 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 30 0.027 D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 25 1.0 AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 25 1.0 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.3 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.3 DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 24 1.8 DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 4.0 DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 4.0 DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 23 4.0 AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 4.0 AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 4.0 DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.3 DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.3 DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.3 DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.3 DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.3 DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.3 DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 5.3 DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 5.3 DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 5.3 DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 5.3 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.3 AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.3 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 29.9 bits (64), Expect = 0.027 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +1 Query: 316 HSAGNQPTQHPPSVTCSRLGGSSTNLRWSGPP 411 H+A P Q P TC+ L + + W PP Sbjct: 1075 HTAEGVPEQPPHDTTCTTLTSQTIRISWMSPP 1106 >D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 24.6 bits (51), Expect = 1.0 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +3 Query: 27 TIPACLP-ITTDYFPDKRSLQNDYLVSDYNLLPDDVNADFAQNRAIYKDPLTTMEVFKEL 203 T+ LP + +Y+ D+ + + Y+ + P A + + +DP T + + Sbjct: 366 TMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKENYQTMSRDPARTPFQWDDS 425 Query: 204 VSQRLAQGFQLIVGVNEN 257 VS + + VNEN Sbjct: 426 VSAGFSSSSNTWLRVNEN 443 >AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 24.6 bits (51), Expect = 1.0 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +3 Query: 27 TIPACLP-ITTDYFPDKRSLQNDYLVSDYNLLPDDVNADFAQNRAIYKDPLTTMEVFKEL 203 T+ LP + +Y+ D+ + + Y+ + P A + + +DP T + + Sbjct: 366 TMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKENYQTMSRDPARTPFQWDDS 425 Query: 204 VSQRLAQGFQLIVGVNEN 257 VS + + VNEN Sbjct: 426 VSAGFSSSSNTWLRVNEN 443 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/27 (33%), Positives = 13/27 (48%) Frame = +1 Query: 334 PTQHPPSVTCSRLGGSSTNLRWSGPPS 414 P+ P V C+ L S + W PP+ Sbjct: 1111 PSIPPEDVRCAALTSQSLQVSWQPPPN 1137 Score = 21.4 bits (43), Expect = 9.3 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +3 Query: 240 VGVNENEVIESHCASTATPPPSKV 311 V V N+ + HC + P P+ V Sbjct: 719 VSVERNKHVALHCQAQGVPTPTIV 742 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/27 (33%), Positives = 13/27 (48%) Frame = +1 Query: 334 PTQHPPSVTCSRLGGSSTNLRWSGPPS 414 P+ P V C+ L S + W PP+ Sbjct: 1107 PSIPPEDVRCAALTSQSLQVSWQPPPN 1133 Score = 21.4 bits (43), Expect = 9.3 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +3 Query: 240 VGVNENEVIESHCASTATPPPSKV 311 V V N+ + HC + P P+ V Sbjct: 715 VSVERNKHVALHCQAQGVPTPTIV 738 >DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor protein. Length = 157 Score = 23.8 bits (49), Expect = 1.8 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = +3 Query: 243 GVNENEVIESHCASTATPPPSKVAPQCGKPANAAPTKRYLLSIGRIFHKLTLVGSTITVT 422 G+N+ + + HC+ P P ++ + + A P LLS G + + V +TI T Sbjct: 32 GMNQCQAVNGHCSHLCLPAP-RINSKSPLLSCACPDGLKLLSDGLMC--VEKVSTTIVPT 88 Query: 423 RYRPRHPY 446 P+ Sbjct: 89 TQEINKPF 96 >DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 22.6 bits (46), Expect = 4.0 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 Query: 24 LTIPACLPITTDYFPDKRSL 83 LTI A P+ YFP R L Sbjct: 132 LTITASCPMNLQYFPMDRQL 151 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 22.6 bits (46), Expect = 4.0 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 Query: 24 LTIPACLPITTDYFPDKRSL 83 LTI A P+ YFP R L Sbjct: 132 LTITASCPMNLQYFPMDRQL 151 >DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor protein. Length = 128 Score = 22.6 bits (46), Expect = 4.0 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = +3 Query: 243 GVNENEVIESHCASTATPPPSKVAPQCGKPANAAPTKRYLLSIG 374 G+N+ + + HC+ P P ++ + + A P LLS G Sbjct: 32 GMNQCQAVNGHCSHLCLPAP-RINSKSPLLSCACPDGLKLLSDG 74 >AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase protein. Length = 510 Score = 22.6 bits (46), Expect = 4.0 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = +3 Query: 531 EKLETYYWNYMDHYICTRG 587 EKL T YW ++ +C G Sbjct: 372 EKLSTIYWFTVEFGLCKEG 390 >AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl subunit protein. Length = 365 Score = 22.6 bits (46), Expect = 4.0 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 Query: 24 LTIPACLPITTDYFPDKRSL 83 LTI A P+ YFP R L Sbjct: 71 LTITASCPMNLQYFPMDRQL 90 >DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 22.2 bits (45), Expect = 5.3 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 5/42 (11%) Frame = +3 Query: 78 SLQNDYLVSDYNLLPDDVNADFAQN-----RAIYKDPLTTME 188 SL N+Y S+YN ++ N ++ N + +YK+ + +E Sbjct: 84 SLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIE 125 >DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 22.2 bits (45), Expect = 5.3 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 5/42 (11%) Frame = +3 Query: 78 SLQNDYLVSDYNLLPDDVNADFAQN-----RAIYKDPLTTME 188 SL N+Y S+YN ++ N ++ N + +YK+ + +E Sbjct: 84 SLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIE 125 >DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 432 PRHPYPPFNIHYRYRFHAP 488 P P+P F YRFH P Sbjct: 147 PPTPFPRFIPPNAYRFHPP 165 >DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 432 PRHPYPPFNIHYRYRFHAP 488 P P+P F YRFH P Sbjct: 147 PPTPFPRFIPPNAYRFHPP 165 >DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 432 PRHPYPPFNIHYRYRFHAP 488 P P+P F YRFH P Sbjct: 147 PPTPFPRFIPPNAYRFHPP 165 >DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 432 PRHPYPPFNIHYRYRFHAP 488 P P+P F YRFH P Sbjct: 147 PPTPFPRFIPPNAYRFHPP 165 >DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 432 PRHPYPPFNIHYRYRFHAP 488 P P+P F YRFH P Sbjct: 151 PPTPFPRFIPPNAYRFHPP 169 >DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 432 PRHPYPPFNIHYRYRFHAP 488 P P+P F YRFH P Sbjct: 156 PPTPFPRFIPPNAYRFHPP 174 >DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 432 PRHPYPPFNIHYRYRFHAP 488 P P+P F YRFH P Sbjct: 156 PPTPFPRFIPPNAYRFHPP 174 >DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 432 PRHPYPPFNIHYRYRFHAP 488 P P+P F YRFH P Sbjct: 156 PPTPFPRFIPPNAYRFHPP 174 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 22.2 bits (45), Expect = 5.3 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = +3 Query: 279 ASTATPPPSKVAPQCGKPA 335 +ST++ PP+K A G+P+ Sbjct: 523 SSTSSSPPAKGAAAAGQPS 541 >AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate receptor protein. Length = 1040 Score = 21.4 bits (43), Expect = 9.3 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +2 Query: 2 HRGRLEVTDHTCLPSDHYGLLSRQEITSK 88 ++ R E T +PSDHY + + EI K Sbjct: 250 NKQRFEYFTRT-IPSDHYQVKAMVEIVMK 277 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 228,001 Number of Sequences: 438 Number of extensions: 5325 Number of successful extensions: 42 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 42 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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