Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0353
(749 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 30 0.027
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 25 1.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 25 1.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.3
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 24 1.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 4.0
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 4.0
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 23 4.0
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 4.0
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 4.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 5.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 5.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 5.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 5.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.3
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 29.9 bits (64), Expect = 0.027
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 316 HSAGNQPTQHPPSVTCSRLGGSSTNLRWSGPP 411
H+A P Q P TC+ L + + W PP
Sbjct: 1075 HTAEGVPEQPPHDTTCTTLTSQTIRISWMSPP 1106
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 24.6 bits (51), Expect = 1.0
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 27 TIPACLP-ITTDYFPDKRSLQNDYLVSDYNLLPDDVNADFAQNRAIYKDPLTTMEVFKEL 203
T+ LP + +Y+ D+ + + Y+ + P A + + +DP T + +
Sbjct: 366 TMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKENYQTMSRDPARTPFQWDDS 425
Query: 204 VSQRLAQGFQLIVGVNEN 257
VS + + VNEN
Sbjct: 426 VSAGFSSSSNTWLRVNEN 443
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 24.6 bits (51), Expect = 1.0
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 27 TIPACLP-ITTDYFPDKRSLQNDYLVSDYNLLPDDVNADFAQNRAIYKDPLTTMEVFKEL 203
T+ LP + +Y+ D+ + + Y+ + P A + + +DP T + +
Sbjct: 366 TMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKENYQTMSRDPARTPFQWDDS 425
Query: 204 VSQRLAQGFQLIVGVNEN 257
VS + + VNEN
Sbjct: 426 VSAGFSSSSNTWLRVNEN 443
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 334 PTQHPPSVTCSRLGGSSTNLRWSGPPS 414
P+ P V C+ L S + W PP+
Sbjct: 1111 PSIPPEDVRCAALTSQSLQVSWQPPPN 1137
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 240 VGVNENEVIESHCASTATPPPSKV 311
V V N+ + HC + P P+ V
Sbjct: 719 VSVERNKHVALHCQAQGVPTPTIV 742
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 334 PTQHPPSVTCSRLGGSSTNLRWSGPPS 414
P+ P V C+ L S + W PP+
Sbjct: 1107 PSIPPEDVRCAALTSQSLQVSWQPPPN 1133
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 240 VGVNENEVIESHCASTATPPPSKV 311
V V N+ + HC + P P+ V
Sbjct: 715 VSVERNKHVALHCQAQGVPTPTIV 738
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 23.8 bits (49), Expect = 1.8
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +3
Query: 243 GVNENEVIESHCASTATPPPSKVAPQCGKPANAAPTKRYLLSIGRIFHKLTLVGSTITVT 422
G+N+ + + HC+ P P ++ + + A P LLS G + + V +TI T
Sbjct: 32 GMNQCQAVNGHCSHLCLPAP-RINSKSPLLSCACPDGLKLLSDGLMC--VEKVSTTIVPT 88
Query: 423 RYRPRHPY 446
P+
Sbjct: 89 TQEINKPF 96
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 24 LTIPACLPITTDYFPDKRSL 83
LTI A P+ YFP R L
Sbjct: 132 LTITASCPMNLQYFPMDRQL 151
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 24 LTIPACLPITTDYFPDKRSL 83
LTI A P+ YFP R L
Sbjct: 132 LTITASCPMNLQYFPMDRQL 151
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 243 GVNENEVIESHCASTATPPPSKVAPQCGKPANAAPTKRYLLSIG 374
G+N+ + + HC+ P P ++ + + A P LLS G
Sbjct: 32 GMNQCQAVNGHCSHLCLPAP-RINSKSPLLSCACPDGLKLLSDG 74
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 531 EKLETYYWNYMDHYICTRG 587
EKL T YW ++ +C G
Sbjct: 372 EKLSTIYWFTVEFGLCKEG 390
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 24 LTIPACLPITTDYFPDKRSL 83
LTI A P+ YFP R L
Sbjct: 71 LTITASCPMNLQYFPMDRQL 90
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.3
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 78 SLQNDYLVSDYNLLPDDVNADFAQN-----RAIYKDPLTTME 188
SL N+Y S+YN ++ N ++ N + +YK+ + +E
Sbjct: 84 SLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIE 125
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.3
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 78 SLQNDYLVSDYNLLPDDVNADFAQN-----RAIYKDPLTTME 188
SL N+Y S+YN ++ N ++ N + +YK+ + +E
Sbjct: 84 SLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIE 125
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 432 PRHPYPPFNIHYRYRFHAP 488
P P+P F YRFH P
Sbjct: 147 PPTPFPRFIPPNAYRFHPP 165
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 432 PRHPYPPFNIHYRYRFHAP 488
P P+P F YRFH P
Sbjct: 147 PPTPFPRFIPPNAYRFHPP 165
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 432 PRHPYPPFNIHYRYRFHAP 488
P P+P F YRFH P
Sbjct: 147 PPTPFPRFIPPNAYRFHPP 165
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 432 PRHPYPPFNIHYRYRFHAP 488
P P+P F YRFH P
Sbjct: 147 PPTPFPRFIPPNAYRFHPP 165
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 432 PRHPYPPFNIHYRYRFHAP 488
P P+P F YRFH P
Sbjct: 151 PPTPFPRFIPPNAYRFHPP 169
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 432 PRHPYPPFNIHYRYRFHAP 488
P P+P F YRFH P
Sbjct: 156 PPTPFPRFIPPNAYRFHPP 174
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 432 PRHPYPPFNIHYRYRFHAP 488
P P+P F YRFH P
Sbjct: 156 PPTPFPRFIPPNAYRFHPP 174
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 432 PRHPYPPFNIHYRYRFHAP 488
P P+P F YRFH P
Sbjct: 156 PPTPFPRFIPPNAYRFHPP 174
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 279 ASTATPPPSKVAPQCGKPA 335
+ST++ PP+K A G+P+
Sbjct: 523 SSTSSSPPAKGAAAAGQPS 541
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 2 HRGRLEVTDHTCLPSDHYGLLSRQEITSK 88
++ R E T +PSDHY + + EI K
Sbjct: 250 NKQRFEYFTRT-IPSDHYQVKAMVEIVMK 277
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,001
Number of Sequences: 438
Number of extensions: 5325
Number of successful extensions: 42
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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