Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0352
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058453-1|AAL13682.1|  941|Drosophila melanogaster GH24474p pro...    98   8e-21
AE014134-3121|AAF53820.2|  941|Drosophila melanogaster CG10137-P...    98   8e-21

>AY058453-1|AAL13682.1|  941|Drosophila melanogaster GH24474p
           protein.
          Length = 941

 Score = 98.3 bits (234), Expect = 8e-21
 Identities = 45/95 (47%), Positives = 61/95 (64%)
 Frame = +2

Query: 5   SNGSSKTSPNKTXXXXXXXXXXXXXDKVFSVYSQANEVVRVLFKDFVPDRVCSAEVGRCL 184
           S+     SPNK              D V+SV+SQA E VR+LF ++VP RV   EV RC+
Sbjct: 505 SSNEHAASPNKVARSAALLLHRAVRDAVYSVFSQATETVRMLFLEYVPGRVSPNEVARCV 564

Query: 185 EKLLPELLRACGDPAPRVHSTAQHTVLTVADCPQV 289
           ++LLPELL   GDP+ R+H+ AQHT+L++A CP+V
Sbjct: 565 DRLLPELLAKSGDPSARLHTLAQHTILSIAACPEV 599


>AE014134-3121|AAF53820.2|  941|Drosophila melanogaster CG10137-PA
           protein.
          Length = 941

 Score = 98.3 bits (234), Expect = 8e-21
 Identities = 45/95 (47%), Positives = 61/95 (64%)
 Frame = +2

Query: 5   SNGSSKTSPNKTXXXXXXXXXXXXXDKVFSVYSQANEVVRVLFKDFVPDRVCSAEVGRCL 184
           S+     SPNK              D V+SV+SQA E VR+LF ++VP RV   EV RC+
Sbjct: 505 SSNEHAASPNKVARSAALLLHRAVRDAVYSVFSQATETVRMLFLEYVPGRVSPNEVARCV 564

Query: 185 EKLLPELLRACGDPAPRVHSTAQHTVLTVADCPQV 289
           ++LLPELL   GDP+ R+H+ AQHT+L++A CP+V
Sbjct: 565 DRLLPELLAKSGDPSARLHTLAQHTILSIAACPEV 599


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,680,828
Number of Sequences: 53049
Number of extensions: 521288
Number of successful extensions: 1672
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)