Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0348
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    27   0.21 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.0  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = +2

Query: 266 EYMKYIGFKSVDNEFTYP----KEXXXSKLRMAQVAIERKLHFCCGSVPIXPI 412
           EY +  GF  +D ++ YP    KE   + LR  + A + K H    +V   PI
Sbjct: 131 EYFEKYGFNGLDIDWEYPEAKDKENFITLLREIKEAFQPKGHLLTIAVSAIPI 183


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 203 YELRSIKKNVFKDLSKLDSFN 265
           Y+LR ++KN       +D+FN
Sbjct: 217 YDLRRVRKNYNSICELVDAFN 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,982
Number of Sequences: 336
Number of extensions: 3021
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)