Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0348
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017220-1|AAH17220.1|  481|Homo sapiens NGLY1 protein protein.        37   0.067
BC007226-1|AAH07226.1|  654|Homo sapiens N-glycanase 1 protein.        37   0.067
BC000963-1|AAH00963.1|  633|Homo sapiens Similar to peptide N-gl...    37   0.067
AF250924-1|AAF74720.2|  654|Homo sapiens PNGase protein.               37   0.067

>BC017220-1|AAH17220.1|  481|Homo sapiens NGLY1 protein protein.
          Length = 481

 Score = 37.1 bits (82), Expect = 0.067
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 675 LLMELLDWFKHDFFKWVDXPDCDLC 749
           LL+ELL WFK +FF WV+   C  C
Sbjct: 152 LLLELLHWFKEEFFHWVNNVLCSKC 176


>BC007226-1|AAH07226.1|  654|Homo sapiens N-glycanase 1 protein.
          Length = 654

 Score = 37.1 bits (82), Expect = 0.067
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 675 LLMELLDWFKHDFFKWVDXPDCDLC 749
           LL+ELL WFK +FF WV+   C  C
Sbjct: 229 LLLELLHWFKEEFFHWVNNVLCSKC 253


>BC000963-1|AAH00963.1|  633|Homo sapiens Similar to peptide
           N-glycanase homolog (S.cerevisiae) protein.
          Length = 633

 Score = 37.1 bits (82), Expect = 0.067
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 675 LLMELLDWFKHDFFKWVDXPDCDLC 749
           LL+ELL WFK +FF WV+   C  C
Sbjct: 226 LLLELLHWFKEEFFHWVNNVLCSKC 250


>AF250924-1|AAF74720.2|  654|Homo sapiens PNGase protein.
          Length = 654

 Score = 37.1 bits (82), Expect = 0.067
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 675 LLMELLDWFKHDFFKWVDXPDCDLC 749
           LL+ELL WFK +FF WV+   C  C
Sbjct: 229 LLLELLHWFKEEFFHWVNNVLCSKC 253


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,417,146
Number of Sequences: 237096
Number of extensions: 1712930
Number of successful extensions: 2113
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)