Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0347
         (445 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.6  
AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.      24   2.1  
AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.      24   2.1  
AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.      24   2.1  
AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.      24   2.1  
AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.      24   2.1  
AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.      24   2.1  
AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.      24   2.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +2

Query: 242  TKALGKHEMRKEMLNDKNRRIFKQ 313
            T+ +GK++M + ++ D+N ++ K+
Sbjct: 2033 TRKIGKNQMMESLIFDENEQVIKK 2056


>AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 110 GKERL--VKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKH 262
           G ERL  +  V+P  L    EDFA + +   Y  F   SEAE +   K LG +
Sbjct: 179 GLERLHQLTSVKPYQLLIEVEDFAGDYRYARYKEFEIGSEAEMYS-LKKLGAY 230


>AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 110 GKERL--VKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKH 262
           G ERL  +  V+P  L    EDFA + +   Y  F   SEAE +   K LG +
Sbjct: 179 GLERLHQLTSVKPYQLLIEVEDFAGDYRYARYKEFEIGSEAEMYS-LKKLGAY 230


>AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 110 GKERL--VKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKH 262
           G ERL  +  V+P  L    EDFA + +   Y  F   SEAE +   K LG +
Sbjct: 179 GLERLHQLTSVKPYQLLIEVEDFAGDYRYARYKEFEIGSEAEMYS-LKKLGAY 230


>AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 110 GKERL--VKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKH 262
           G ERL  +  V+P  L    EDFA + +   Y  F   SEAE +   K LG +
Sbjct: 179 GLERLHQLTSVKPYQLLIEVEDFAGDYRYARYKEFEIGSEAEMYS-LKKLGAY 230


>AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 110 GKERL--VKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKH 262
           G ERL  +  V+P  L    EDFA + +   Y  F   SEAE +   K LG +
Sbjct: 179 GLERLHQLTSVKPYQLLIEVEDFAGDYRYARYKEFEIGSEAEMYS-LKKLGAY 230


>AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 110 GKERL--VKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKH 262
           G ERL  +  V+P  L    EDFA + +   Y  F   SEAE +   K LG +
Sbjct: 179 GLERLHQLTSVKPYQLLIEVEDFAGDYRYARYKEFEIGSEAEMYS-LKKLGAY 230


>AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 110 GKERL--VKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKH 262
           G ERL  +  V+P  L    EDFA + +   Y  F   SEAE +   K LG +
Sbjct: 179 GLERLHQLTSVKPYQLLIEVEDFAGDYRYARYKEFEIGSEAEMYS-LKKLGAY 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,834
Number of Sequences: 2352
Number of extensions: 7316
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)