Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0347
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068492-1|AAH68492.1| 102|Homo sapiens mitochondrial ribosomal... 37 0.036
BC023616-1|AAH23616.1| 102|Homo sapiens mitochondrial ribosomal... 37 0.036
BC000002-1|AAH00002.1| 102|Homo sapiens MRP63 protein protein. 37 0.036
AL158032-5|CAM13061.1| 102|Homo sapiens mitochondrial ribosomal... 37 0.036
AB049957-1|BAB41010.1| 102|Homo sapiens mitochondrial ribosomal... 37 0.036
AL512622-7|CAI12189.2| 844|Homo sapiens chromosome 10 open read... 31 1.4
AL512622-2|CAO03384.1| 425|Homo sapiens chromosome 10 open read... 31 1.4
AL162274-2|CAH74003.2| 844|Homo sapiens chromosome 10 open read... 31 1.4
AK126964-1|BAC86766.1| 338|Homo sapiens protein ( Homo sapiens ... 31 1.4
BC128510-1|AAI28511.1| 1203|Homo sapiens KIAA0999 protein protein. 31 1.8
BC121188-1|AAI21189.1| 185|Homo sapiens KIAA0999 protein protein. 31 1.8
AB023216-1|BAA76843.2| 1371|Homo sapiens KIAA0999 protein protein. 31 1.8
BC021662-1|AAH21662.1| 500|Homo sapiens hypothetical protein FL... 29 9.6
AK025681-1|BAB15214.1| 463|Homo sapiens protein ( Homo sapiens ... 29 9.6
>BC068492-1|AAH68492.1| 102|Homo sapiens mitochondrial ribosomal
protein 63 protein.
Length = 102
Score = 36.7 bits (81), Expect = 0.036
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +2
Query: 68 LLRRNRMPNGNIFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTK 247
LL R R+P G + GK R + V + + + IE +N +L PY++ + GH
Sbjct: 6 LLWRGRIP-GRQWIGKHRRPRFVSLRAKQNMIRRLEIEAENHYWLSMPYMTREQERGHA- 63
Query: 248 ALGKHEMRKEMLNDKNRRIFKQDVTLYERLQHLRIGEKW 364
A+ + E E + F + ++L HL + +KW
Sbjct: 64 AVRRRE-AFEAIKAAATSKFPPHRFIADQLDHLNVTKKW 101
>BC023616-1|AAH23616.1| 102|Homo sapiens mitochondrial ribosomal
protein 63 protein.
Length = 102
Score = 36.7 bits (81), Expect = 0.036
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +2
Query: 68 LLRRNRMPNGNIFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTK 247
LL R R+P G + GK R + V + + + IE +N +L PY++ + GH
Sbjct: 6 LLWRGRIP-GRQWIGKHRRPRFVSLRAKQNMIRRLEIEAENHYWLSMPYMTREQERGHA- 63
Query: 248 ALGKHEMRKEMLNDKNRRIFKQDVTLYERLQHLRIGEKW 364
A+ + E E + F + ++L HL + +KW
Sbjct: 64 AVRRRE-AFEAIKAAATSKFPPHRFIADQLDHLNVTKKW 101
>BC000002-1|AAH00002.1| 102|Homo sapiens MRP63 protein protein.
Length = 102
Score = 36.7 bits (81), Expect = 0.036
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +2
Query: 68 LLRRNRMPNGNIFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTK 247
LL R R+P G + GK R + V + + + IE +N +L PY++ + GH
Sbjct: 6 LLWRGRIP-GRQWIGKHRRPRFVSLRAKQNMIRRLEIEAENHYWLSMPYMTREQERGHA- 63
Query: 248 ALGKHEMRKEMLNDKNRRIFKQDVTLYERLQHLRIGEKW 364
A+ + E E + F + ++L HL + +KW
Sbjct: 64 AVRRRE-AFEAIKAAATSKFPPHRFIADQLDHLNVTKKW 101
>AL158032-5|CAM13061.1| 102|Homo sapiens mitochondrial ribosomal
protein 63 protein.
Length = 102
Score = 36.7 bits (81), Expect = 0.036
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +2
Query: 68 LLRRNRMPNGNIFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTK 247
LL R R+P G + GK R + V + + + IE +N +L PY++ + GH
Sbjct: 6 LLWRGRIP-GRQWIGKHRRPRFVSLRAKQNMIRRLEIEAENHYWLSMPYMTREQERGHA- 63
Query: 248 ALGKHEMRKEMLNDKNRRIFKQDVTLYERLQHLRIGEKW 364
A+ + E E + F + ++L HL + +KW
Sbjct: 64 AVRRRE-AFEAIKAAATSKFPPHRFIADQLDHLNVTKKW 101
>AB049957-1|BAB41010.1| 102|Homo sapiens mitochondrial ribosomal
protein bMRP63 protein.
Length = 102
Score = 36.7 bits (81), Expect = 0.036
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +2
Query: 68 LLRRNRMPNGNIFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTK 247
LL R R+P G + GK R + V + + + IE +N +L PY++ + GH
Sbjct: 6 LLWRGRIP-GRQWIGKHRRPRFVSLRAKQNMIRRLEIEAENHYWLSMPYMTREQERGHA- 63
Query: 248 ALGKHEMRKEMLNDKNRRIFKQDVTLYERLQHLRIGEKW 364
A+ + E E + F + ++L HL + +KW
Sbjct: 64 AVRRRE-AFEAIKAAATSKFPPHRFIADQLDHLNVTKKW 101
>AL512622-7|CAI12189.2| 844|Homo sapiens chromosome 10 open reading
frame 39 protein.
Length = 844
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 119 RLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKHEM--RKEMLNDK 292
R V + K L++I+E A ++ M+ L SE E F K E+ RK+ L+
Sbjct: 681 RTVLTLAEKWLQQIEETEAALQRKMVDLE----SEKELFSKQKGYLDEELDYRKQALDQA 736
Query: 293 NRRIFKQDVTLYERLQ 340
N+ I + + LY+ LQ
Sbjct: 737 NKHILELEAMLYDALQ 752
>AL512622-2|CAO03384.1| 425|Homo sapiens chromosome 10 open reading
frame 39 protein.
Length = 425
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 119 RLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKHEM--RKEMLNDK 292
R V + K L++I+E A ++ M+ L SE E F K E+ RK+ L+
Sbjct: 118 RTVLTLAEKWLQQIEETEAALQRKMVDLE----SEKELFSKQKGYLDEELDYRKQALDQA 173
Query: 293 NRRIFKQDVTLYERLQ 340
N+ I + + LY+ LQ
Sbjct: 174 NKHILELEAMLYDALQ 189
>AL162274-2|CAH74003.2| 844|Homo sapiens chromosome 10 open reading
frame 39 protein.
Length = 844
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 119 RLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKHEM--RKEMLNDK 292
R V + K L++I+E A ++ M+ L SE E F K E+ RK+ L+
Sbjct: 681 RTVLTLAEKWLQQIEETEAALQRKMVDLE----SEKELFSKQKGYLDEELDYRKQALDQA 736
Query: 293 NRRIFKQDVTLYERLQ 340
N+ I + + LY+ LQ
Sbjct: 737 NKHILELEAMLYDALQ 752
>AK126964-1|BAC86766.1| 338|Homo sapiens protein ( Homo sapiens
cDNA FLJ45017 fis, clone BRAWH3015175. ).
Length = 338
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 119 RLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGKHEM--RKEMLNDK 292
R V + K L++I+E A ++ M+ L SE E F K E+ RK+ L+
Sbjct: 175 RTVLTLAEKWLQQIEETEAALQRKMVDLE----SEKELFSKQKGYLDEELDYRKQALDQA 230
Query: 293 NRRIFKQDVTLYERLQ 340
N+ I + + LY+ LQ
Sbjct: 231 NKHILELEAMLYDALQ 246
>BC128510-1|AAI28511.1| 1203|Homo sapiens KIAA0999 protein protein.
Length = 1203
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +2
Query: 53 KLTLVLLRRNRMPNGN---IFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSE 223
K+ + ++ + ++ N IFR + +++K + H+ R+ + +E + M+YL Y S
Sbjct: 33 KVAIKIIDKTQLDEENLKKIFR-EVQIMKMLCHPHIIRLYQ--VMETERMIYLVTEYASG 89
Query: 224 AESFGHTKALGKHEMRKEMLNDKNRRIFKQDVT 322
E F H A G+ M + RR FKQ VT
Sbjct: 90 GEIFDHLVAHGR------MAEKEARRKFKQIVT 116
>BC121188-1|AAI21189.1| 185|Homo sapiens KIAA0999 protein protein.
Length = 185
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +2
Query: 53 KLTLVLLRRNRMPNGN---IFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSE 223
K+ + ++ + ++ N IFR + +++K + H+ R+ + +E + M+YL Y S
Sbjct: 55 KVAIKIIDKTQLDEENLKKIFR-EVQIMKMLCHPHIIRLYQ--VMETERMIYLVTEYASG 111
Query: 224 AESFGHTKALGKHEMRKEMLNDKNRRIFKQDVT 322
E F H A G+ M + RR FKQ VT
Sbjct: 112 GEIFDHLVAHGR------MAEKEARRKFKQIVT 138
>AB023216-1|BAA76843.2| 1371|Homo sapiens KIAA0999 protein protein.
Length = 1371
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +2
Query: 53 KLTLVLLRRNRMPNGN---IFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSE 223
K+ + ++ + ++ N IFR + +++K + H+ R+ + +E + M+YL Y S
Sbjct: 141 KVAIKIIDKTQLDEENLKKIFR-EVQIMKMLCHPHIIRLYQ--VMETERMIYLVTEYASG 197
Query: 224 AESFGHTKALGKHEMRKEMLNDKNRRIFKQDVT 322
E F H A G+ M + RR FKQ VT
Sbjct: 198 GEIFDHLVAHGR------MAEKEARRKFKQIVT 224
>BC021662-1|AAH21662.1| 500|Homo sapiens hypothetical protein
FLJ22028 protein.
Length = 500
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 143 KHLRRIKEDFAIEEQN--MLYLRFPYLSEAESFGHTKALGKHEMRKEMLNDKNRRIFKQ 313
K + +I E+F +EEQ+ ML RFP + ES K L K E + D N+ ++K+
Sbjct: 54 KQISKILEEFDVEEQSSTMLGKRFPNIKVIES--GVKQL-KSEEHCIVTEDGNQHVYKK 109
>AK025681-1|BAB15214.1| 463|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22028 fis, clone HEP08589. ).
Length = 463
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 143 KHLRRIKEDFAIEEQN--MLYLRFPYLSEAESFGHTKALGKHEMRKEMLNDKNRRIFKQ 313
K + +I E+F +EEQ+ ML RFP + ES K L K E + D N+ ++K+
Sbjct: 54 KQISKILEEFDVEEQSSTMLGKRFPNIKVIES--GVKQL-KSEEHCIVTEDGNQHVYKK 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,865,039
Number of Sequences: 237096
Number of extensions: 817814
Number of successful extensions: 1312
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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