Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0347
         (445 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021106-7|CAA15941.1|  106|Drosophila melanogaster EG:63B12.11 ...    82   4e-16
AE014298-276|AAF45680.1|  106|Drosophila melanogaster CG14817-PA...    82   4e-16
BT023509-1|AAY84909.1|  702|Drosophila melanogaster LD07105p pro...    29   2.2  
AE013599-2747|AAF57652.1|  702|Drosophila melanogaster CG15072-P...    29   2.2  

>AL021106-7|CAA15941.1|  106|Drosophila melanogaster EG:63B12.11
           protein.
          Length = 106

 Score = 81.8 bits (193), Expect = 4e-16
 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
 Frame = +2

Query: 50  MKLTLVLLRRNRMPNGNIFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAE 229
           M LTL+ L +  +P G+IFRGK RLVK V  + +  +  ++  +EQ ML LR PYL+  +
Sbjct: 1   MHLTLINLFKKTVP-GHIFRGKRRLVKPVSQRAMDTLTREYERQEQVMLLLRHPYLTMEQ 59

Query: 230 SFGHTKALGKHE-MRKEMLNDKNRRIFKQDVTLYERLQHLRIGEKWE 367
           SFGH K L K E +     +++  R  K  VT+ ERL  L+I E W+
Sbjct: 60  SFGHAKELQKREKLVARWTDEQTLRKMKPHVTIEERLNQLKIKEAWD 106


>AE014298-276|AAF45680.1|  106|Drosophila melanogaster CG14817-PA
           protein.
          Length = 106

 Score = 81.8 bits (193), Expect = 4e-16
 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
 Frame = +2

Query: 50  MKLTLVLLRRNRMPNGNIFRGKERLVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAE 229
           M LTL+ L +  +P G+IFRGK RLVK V  + +  +  ++  +EQ ML LR PYL+  +
Sbjct: 1   MHLTLINLFKKTVP-GHIFRGKRRLVKPVSQRAMDTLTHEYERQEQVMLLLRHPYLTMEQ 59

Query: 230 SFGHTKALGKHE-MRKEMLNDKNRRIFKQDVTLYERLQHLRIGEKWE 367
           SFGH K L K E +     +++  R  K  VT+ ERL  L+I E W+
Sbjct: 60  SFGHAKELQKREKLVARWTDEQTLRKMKPHVTIEERLNQLKIKEAWD 106


>BT023509-1|AAY84909.1|  702|Drosophila melanogaster LD07105p
           protein.
          Length = 702

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 122 LVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGK 259
           ++K +   H+ R+ E   +E Q+M+YL   Y    E F H  A G+
Sbjct: 91  ILKSLRHPHITRLYE--VMESQSMIYLVTEYAPNGEIFDHLVANGR 134


>AE013599-2747|AAF57652.1|  702|Drosophila melanogaster CG15072-PA
           protein.
          Length = 702

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 122 LVKQVEPKHLRRIKEDFAIEEQNMLYLRFPYLSEAESFGHTKALGK 259
           ++K +   H+ R+ E   +E Q+M+YL   Y    E F H  A G+
Sbjct: 91  ILKSLRHPHITRLYE--VMESQSMIYLVTEYAPNGEIFDHLVANGR 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,561,199
Number of Sequences: 53049
Number of extensions: 270867
Number of successful extensions: 633
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)