Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0345
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.1  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   3.3  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   5.8  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   5.8  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 567 ASKHTETSYEVVAHPHHEEHYASSGHGWG 653
           +S+H + +++   H HH +H    G G G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 300


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 567 ASKHTETSYEVVAHPHHEEHYASSGHGWG 653
           +S+H + +++   H HH +H    G G G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 300


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 567 ASKHTETSYEVVAHPHHEEHYASSGHGWG 653
           +S+H + +++   H HH +H    G G G
Sbjct: 224 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 252


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 693 GAVGHVLGVIDRPAPSRGRCLRSAPRG 613
           G +  + GV ++ AP R RC R   RG
Sbjct: 459 GCISKIRGV-EKAAPERQRCYRCLERG 484


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 687 VGHVLGVIDRPAPSRGRCLRSAPRGEDGRPLRNWSRCA 574
           +GH+       A  +  C+R    G   R  +N ++CA
Sbjct: 514 MGHIASNCRSTADRQNLCIRCGLTGHKARSCQNEAKCA 551


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 374 SPHALNSGRRELELYDVIFQEVCHTVYEPRLDLC 273
           SP    +G+   E+ D+I  +VC  + E  L  C
Sbjct: 325 SPFPPVAGKTSTEVLDIIHSDVCGPMEETTLGGC 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,498
Number of Sequences: 2352
Number of extensions: 13480
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)