Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0343
(580 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 3.8
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 22 5.0
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 5.0
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 6.7
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 8.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 8.8
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 117 RRSSWLLPPLLCRSCPIRCR 58
RRS + PP +CP+ C+
Sbjct: 333 RRSEPVEPPRRKNNCPLHCK 352
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 341 GFTCICLCTIRSAKWKARLHVHSCRC 418
GF C+C+ + + K RLH C
Sbjct: 9 GF-CVCVGALTIEELKTRLHTEQSVC 33
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 159 NYAMDVYELNRRVNSSE 209
NY DVY+ N V+S E
Sbjct: 7 NYYGDVYQWNHTVSSGE 23
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 195 VNSSESIVGWWATGNEVTNHSSVIHEYYSR 284
V SSE + W A E+ S ++ Y R
Sbjct: 430 VKSSELSISWDAPITEIGGDSDLVERYEVR 459
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 8.8
Identities = 13/72 (18%), Positives = 29/72 (40%)
Frame = +3
Query: 27 ERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSS 206
E +N R + G ++ V + + + E +L+Y M+ ELN
Sbjct: 178 EAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYMREYNDPEYKLDYFMEDVELNAYYYYM 237
Query: 207 ESIVGWWATGNE 242
++ +W + ++
Sbjct: 238 REMLPYWMSSSQ 249
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWV 345
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWV 345
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWV 345
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWV 345
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWV 345
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWV 345
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWV 345
+ +L T WL++EWV
Sbjct: 98 NQILTTNAWLKLEWV 112
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWV 345
+ +L T WL++EWV
Sbjct: 98 NQILTTNAWLKLEWV 112
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 8.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 301 SMLLWTLHWLEVEWVYVHM 357
+ LL T WL++EW V+M
Sbjct: 67 NQLLITNLWLKLEWNDVNM 85
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,701
Number of Sequences: 438
Number of extensions: 3441
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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