Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0339
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0278 - 28111655-28112531,28113896-28114029,28114131-281149... 54 1e-07
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 37 0.020
06_03_1248 + 28685911-28687719 31 0.74
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 31 1.3
06_03_1373 + 29667871-29668782,29668872-29669851,29670156-296703... 30 1.7
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 30 1.7
01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718 30 1.7
01_05_0548 + 23149271-23149568,23149766-23149845,23150137-231502... 30 2.3
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 30 2.3
11_04_0177 - 14547782-14548142,14549740-14549837,14550020-14550106 29 3.0
02_01_0168 + 1162447-1162866,1162940-1163317,1163606-1163829,116... 29 3.0
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 5.2
02_01_0791 - 5930553-5930802,5931042-5932351 29 5.2
01_06_0641 - 30782235-30782423,30782498-30782605,30782848-307829... 29 5.2
01_05_0666 + 24132641-24132768,24134854-24134860,24135042-241352... 29 5.2
12_02_1147 - 26459481-26460124,26460241-26460382,26461658-264616... 28 6.9
04_03_0887 + 20557974-20558186,20558265-20558456,20558548-20558706 28 6.9
02_01_0766 + 5706714-5707013,5707100-5707217,5708329-5708753 28 6.9
01_01_0164 + 1403635-1403708,1403960-1403999,1404103-1404178,140... 28 6.9
11_04_0355 + 16705281-16706006 28 9.1
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 28 9.1
02_04_0191 - 20783143-20784365,20784453-20784597,20784977-207853... 28 9.1
02_02_0008 + 6061508-6061624,6062468-6062566,6062636-6063039,606... 28 9.1
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 28 9.1
>01_06_0278 -
28111655-28112531,28113896-28114029,28114131-28114992,
28115636-28115735,28115848-28115939,28116031-28116122
Length = 718
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +1
Query: 58 RLGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYM 183
R G E V+RS+NNLLE FHQS+F Y L A +F+S+G YM
Sbjct: 424 RGGRLTEGVVRSVNNLLEKFHQSFFLYFLTAPSKFISVGVYM 465
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 259 ERSSQAEDPVDSEAKEPGERPPER----LSESSNQRVHNRKTIKEKHSDSESEIPGEQDV 426
+ ++ED D ++E G+ PP++ + S + + T KE SD ES+ E D
Sbjct: 317 QSKDESEDSSDESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESD---EDDS 373
Query: 427 KEVVQSSDERVANSQTQ 477
+ +SSDE V QTQ
Sbjct: 374 SD--ESSDEDVKQKQTQ 388
>06_03_1248 + 28685911-28687719
Length = 602
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAK---EPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGE 417
+P+ ++ E+ V S A+ E ++PPE +E S V ++ +++E E +
Sbjct: 233 EPSPAAAAVQEEAVTSRAQLTEEHHQQPPEAPAEPSPAAVAVQEEAAAAETEAEQEKQPD 292
Query: 418 QDVKEVVQSSDERVANSQ 471
+ +EVV + +E+V + Q
Sbjct: 293 ETPQEVVAAVEEKVQDEQ 310
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/79 (18%), Positives = 27/79 (34%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQ 420
G P R+ E+ + P P + + V +R + E+H E P E
Sbjct: 208 GASPGPTRAQPTEEHHQQPTEAPPAEPSPAAAAVQEEAVTSRAQLTEEHHQQPPEAPAEP 267
Query: 421 DVKEVVQSSDERVANSQTQ 477
V + A ++ +
Sbjct: 268 SPAAVAVQEEAAAAETEAE 286
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHS-DSESEIPGEQ 420
VQ ER + ++ + +K+P + +S+ + + K K+K + D + + G+Q
Sbjct: 503 VQRRMERQRREDELKNRSSKKPQDADQPMGKRASSPQTGSEKDTKDKSAKDKDKDKSGQQ 562
Query: 421 DVKEVVQSSDERVANSQTQL 480
D K+ + S +VA S ++
Sbjct: 563 D-KDAKEGSSVQVAGSSGEI 581
>06_03_1373 +
29667871-29668782,29668872-29669851,29670156-29670350,
29670460-29670676
Length = 767
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDV 426
QP +ER AE SE+ GE PE ++ T+ E+ + +PGE+D
Sbjct: 136 QPEEERGGDAEAARTSESDAGGEVDPE-----------DKPTVSERTEEMVDTLPGEEDR 184
Query: 427 KEV 435
EV
Sbjct: 185 AEV 187
>03_06_0670 +
35434203-35434355,35436601-35436729,35436978-35438409,
35438524-35439014
Length = 734
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 235 WVGVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
++ V E+ + + D + KE E ++ E S + ++K KEKH D + +
Sbjct: 87 YISVTAASEKHKEKKHKKDKKDKERKEGKDKKDKERSKDKHRDKKDRKEKHKDKKKD 143
>01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718
Length = 336
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 262 RSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPG 414
+S + +P E K+ ++PP +ES +Q N+ K SD +E PG
Sbjct: 69 KSGKQAEPWPEEPKQ--QQPPPPPAESQSQETKNQSDESSKPSDQPAEKPG 117
>01_05_0548 +
23149271-23149568,23149766-23149845,23150137-23150223,
23150421-23150729,23150774-23150899,23151977-23152360,
23152603-23152608
Length = 429
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 253 TQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
T R++ E DS+ K + E S+ +R K KHS++ESEI G + +
Sbjct: 348 TDGRANGEESAGDSDRKGDAS-----IKEESDATASDRDARKRKHSETESEIDGRANARA 402
Query: 433 VVQSSDER 456
+S R
Sbjct: 403 PRTASASR 410
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +1
Query: 253 TQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
++ RSS + D DS+ + G R + S++R H R + SDS++ D +
Sbjct: 1169 SKRRSSDSSDDTDSDEYDSGSEEENRRKKRSHRRKHRRHS---SRSDSDASDYSSDDEER 1225
Query: 433 VVQSSDERVANS 468
D + S
Sbjct: 1226 RSSKKDHSSSRS 1237
>11_04_0177 - 14547782-14548142,14549740-14549837,14550020-14550106
Length = 181
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -1
Query: 234 QRQRAEQHGRAHQAQA---GHVLADGHKPIGGGQHVEEVALVEGLQQVVEGAEDGLEREA 64
+R+ A GR + A G + H GGG+ VEEVA+ G ++ E + G EA
Sbjct: 101 EREAAAARGREKREVADGGGEGGEEAHGGGGGGRRVEEVAVDAG-EEAEERTKAGEGEEA 159
Query: 63 EAVEVSGGERVHA 25
E+ G R A
Sbjct: 160 ESWRRDGSGRRRA 172
>02_01_0168 +
1162447-1162866,1162940-1163317,1163606-1163829,
1163929-1163992,1164521-1164717,1164849-1165062
Length = 498
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 274 AEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSDE 453
+E P++ P + PP QRV R+ E+ D ++ PG + E + S+E
Sbjct: 135 SEKPMEQLGSPPDQPPPP----PPRQRVGTRRWRVERRHDIDAFTPGLLSLYESLNPSEE 190
Query: 454 RVANSQTQLNFSMVN 498
A Q QL S+ N
Sbjct: 191 HKA-KQRQLIESLTN 204
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
+E EDP + + ER E LSES +T SD +E+P E E
Sbjct: 952 RESDVVTEDPAEPQIDAAAERSAEVLSESQT----GVETPVLHQSDRTNEVPSEPQTDEA 1007
Query: 436 VQSSDER 456
S E+
Sbjct: 1008 SDKSTEQ 1014
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 289 DSEAKEPGERPPERLSESSNQRVHNRKTIKEK----HSDSESEIPGEQDVKEVVQSSDER 456
D+ AKE E + S+ ++ +T EK SD +E P E + + S E
Sbjct: 917 DATAKESSEPERDTASDQLAEQPSESRTAGEKATLRESDVVTEDPAEPQIDAAAERSAEV 976
Query: 457 VANSQT 474
++ SQT
Sbjct: 977 LSESQT 982
>02_01_0791 - 5930553-5930802,5931042-5932351
Length = 519
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 615 VHRHLGGQTKVFGAELREEDGRVHGGV 535
V H GG K FG +EEDG + GV
Sbjct: 315 VRTHKGGDDKCFGCVTQEEDGEGNVGV 341
>01_06_0641 -
30782235-30782423,30782498-30782605,30782848-30782959,
30783429-30783526,30784249-30784336,30784780-30784875,
30785101-30785171,30786003-30786075,30787023-30787324,
30787418-30787503,30788024-30788084,30789386-30789688
Length = 528
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 293 RRPKNQESDRLNDYQKAQTSECTTGRRSKK 382
+RPKN D Y K T + T GR +K+
Sbjct: 222 KRPKNNSFDSNGMYDKLHTKDVTLGRSTKR 251
>01_05_0666 +
24132641-24132768,24134854-24134860,24135042-24135230,
24136017-24136185,24136299-24136744,24137540-24137563,
24137736-24137828,24138806-24138884,24138979-24139063,
24139479-24139788,24140471-24140614
Length = 557
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKE--PGERPPERLSESSNQRVHN 363
+E S++ + + A++ PGERPP+R+ S N V N
Sbjct: 254 EESVSKSTENITKPAQKVLPGERPPKRVKFSENVTVQN 291
>12_02_1147 -
26459481-26460124,26460241-26460382,26461658-26461699,
26463377-26463502
Length = 317
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRK---TIKEKHSDSES--E 405
G T RS++ + V + GE+ P+R SS ++ K T E+ D+E+ E
Sbjct: 102 GTGDTPRRSARISEKVKAFDSPEGEKIPKRSRNSSGRKGKQEKKEATENEEAKDAEADKE 161
Query: 406 IPGEQDVKE 432
P E KE
Sbjct: 162 APSEDAPKE 170
>04_03_0887 + 20557974-20558186,20558265-20558456,20558548-20558706
Length = 187
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 95 RERRTVSSARPRRWKLAAESECTRG 21
R+ R ++S+RP RW+L+A E G
Sbjct: 27 RQPRLLASSRPPRWRLSAVQETKEG 51
>02_01_0766 + 5706714-5707013,5707100-5707217,5708329-5708753
Length = 280
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 244 VQPTQERSSQAED-PVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQ 420
+ PT E S +ED DSE +E G +P S + + E+ +D +S +
Sbjct: 189 LMPTNEHSVASEDGKDDSEGEEKGSKPSSSSSANGGAVPGEAEAEDERSTDMKSTVTAAL 248
Query: 421 DVKEVVQSSDERVA 462
++S V+
Sbjct: 249 RALREIRSGSSTVS 262
>01_01_0164 +
1403635-1403708,1403960-1403999,1404103-1404178,
1404680-1405827
Length = 445
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 234 QRQRAEQHGRAHQAQAGHVLADGHK 160
Q+Q +QHG+ HQ Q + DG+K
Sbjct: 124 QQQGQQQHGQQHQKQGANPSKDGNK 148
>11_04_0355 + 16705281-16706006
Length = 241
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 117 EGLQQVVEGAEDGLEREAEAVEVSGGERVHARRR 16
+ + + +E ED L R+ E V GG+ +RRR
Sbjct: 112 DAIHRAIEAFEDHLSRKEEEEVVGGGKGASSRRR 145
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/72 (20%), Positives = 26/72 (36%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
+E + + +S ++ GER R E + R S SESE E +
Sbjct: 58 EEEEEEGDAGSESSGEDSGERRKRRRKEKERRHRRRRSRSASSGSSSESESESESSYSDC 117
Query: 436 VQSSDERVANSQ 471
S+ + +
Sbjct: 118 SAGSESETDSEE 129
>02_04_0191 -
20783143-20784365,20784453-20784597,20784977-20785345,
20786164-20786250,20786405-20786603,20786733-20786818
Length = 702
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +1
Query: 250 PTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK 429
P Q Q P +A PP ++S +SN+ +N K K + G ++
Sbjct: 333 PVQPVQVQLPPPQLHQAPAQSAPPPPKVSNASNKSRNNSK----KQVAQSIPVNGPLSIQ 388
Query: 430 EVVQSSDERVANSQTQLNF 486
E ++ R+A NF
Sbjct: 389 EAALAAGGRIAEPSVATNF 407
>02_02_0008 +
6061508-6061624,6062468-6062566,6062636-6063039,
6064218-6064278,6064413-6064466,6064786-6064854,
6064993-6065058,6065162-6065230,6065448-6065537
Length = 342
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 325 ERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSDERVANSQTQLN 483
+R E+S R+ KE+ S P + D +++ SSD+ ++++ QLN
Sbjct: 181 DREKENSKDYDSEREKEKEQRSRKRFSRPKDHDSRDLSVSSDDLHSDAKRQLN 233
>02_01_0297 +
1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 645 QHGGGHAQAVVHRHLGGQTKVFGAELREEDGRVHGGVPQH 526
QH GGH+ + +H ++ + +G DG V+GG+ H
Sbjct: 267 QHIGGHSNSGMHSNMLENSSAYGL----SDGHVNGGMGVH 302
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,019,284
Number of Sequences: 37544
Number of extensions: 333437
Number of successful extensions: 1044
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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