Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0339
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38526| Best HMM Match : Gaa1 (HMM E-Value=0.51) 71 8e-13
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 35 0.061
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 34 0.11
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 33 0.33
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 31 0.76
SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1) 31 0.76
SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078) 31 1.00
SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27) 31 1.3
SB_23744| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1) 30 2.3
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 29 3.0
SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 29 4.0
SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 4.0
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_33739| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 29 4.0
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 29 5.3
SB_35737| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_3982| Best HMM Match : DUF1311 (HMM E-Value=2.2) 29 5.3
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_30427| Best HMM Match : bZIP_2 (HMM E-Value=4.3) 29 5.3
SB_30423| Best HMM Match : Filament (HMM E-Value=3.3) 29 5.3
SB_49499| Best HMM Match : Ribosomal_S9 (HMM E-Value=1.2) 28 7.0
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 7.0
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_8451| Best HMM Match : GRP (HMM E-Value=9.6) 28 7.0
SB_3290| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_867| Best HMM Match : Leo1 (HMM E-Value=0) 28 7.0
SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06) 28 9.3
SB_35437| Best HMM Match : DUF1212 (HMM E-Value=1.5) 28 9.3
SB_14526| Best HMM Match : Drf_FH1 (HMM E-Value=0.16) 28 9.3
SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 28 9.3
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 28 9.3
SB_11170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089) 28 9.3
>SB_38526| Best HMM Match : Gaa1 (HMM E-Value=0.51)
Length = 189
Score = 71.3 bits (167), Expect = 8e-13
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Frame = +1
Query: 52 FHRLGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYMPSXXXXXXXXXXXXXX 231
F+ +G LE + RSLNNLLE FHQS+FFY+LP+ R+VSIG YMP
Sbjct: 61 FYNIGRVLEGICRSLNNLLERFHQSFFFYLLPSPGRYVSIGMYMPPFGCLLLGPLITAVL 120
Query: 232 XW-VGVQP--TQERSSQAEDPVDSEAKEPG-ERPPERLSESSNQRVH-NRKTIKEK 384
W +P TQ S +D + +E G E + + S Q H + +++K
Sbjct: 121 LWSAACEPNDTQAACSSIQDGTEKVTEECGAEDKAVKDVDGSKQSEHVDESVLRQK 176
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 35.1 bits (77), Expect = 0.061
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPG-ERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQ 420
V PT+E E+P +EP E E + +++ ++ + D ES + E
Sbjct: 821 VIPTEETEEYTEEPEVVPTEEPSDEEESEEAGREKEEEEEDQREGRDHNDDEESVVKEEP 880
Query: 421 DVKEVVQSSDERVANSQTQ 477
+ + + DE A S+T+
Sbjct: 881 ENSQEEEIDDEEAAESKTE 899
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSD--SESEIPGEQDVK 429
+E+ E+PVDS+ EP E+ E + + +++ +E+E P EQD +
Sbjct: 241 KEKPEGQENPVDSQLSEPAEQAQESEKADDKKSTEPAEPVEQSQDSGVAEAESPAEQDSE 300
Query: 430 E 432
E
Sbjct: 301 E 301
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +1
Query: 325 ERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSDERVANSQTQL 480
+ L ++S RV + KTIK+K S++++ EQD+K ++ +D N + L
Sbjct: 2995 DELHKTSKDRVIDEKTIKDKESENKTLKEEEQDLKRRLRQADNVQLNLRKDL 3046
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 268 SQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
S +D D E E PP S ++ H+RK K SDS+SE
Sbjct: 10 SPKKDESDKEEASSDEEPPSPPRPSPHRHKHSRKHQHSKQSDSDSE 55
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +1
Query: 238 VGVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGE 417
VG T+ SS+ +P E+ P P + L +S ++ +K KEK DSE
Sbjct: 1495 VGEVSTERLSSKESEP---ESVPPESVPHKELGKSKVEKTPEKKKGKEKTEDSEEYYEDT 1551
Query: 418 QDVKEVVQSSDERVANS 468
+++ V +R+ +S
Sbjct: 1552 EEIVVVKIKRKKRIPSS 1568
>SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1)
Length = 782
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +1
Query: 238 VGVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGE 417
VG T+ SS+ +P E+ P P + L +S ++ +K KEK DSE
Sbjct: 26 VGEVSTERLSSKESEP---ESVPPESVPHKELGKSKVEKTPEKKKGKEKTEDSEEYYEDT 82
Query: 418 QDVKEVVQSSDERVANS 468
+++ V +R+ +S
Sbjct: 83 EEIVVVKIKRKKRIPSS 99
>SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078)
Length = 539
Score = 31.1 bits (67), Expect = 1.00
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 271 QAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSS 447
Q + P +S P PP+ E + +HN++ ++ +H S +E QDV++ VQ S
Sbjct: 307 QMKSPPES-LPSPPPLPPQDYEE---EPLHNKRKVRPRHERSATEPVCMQDVQQAVQRS 361
>SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27)
Length = 271
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/74 (20%), Positives = 36/74 (48%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDV 426
Q +E + E + EAK E E+ +++ + ++ K+K +++E E E++
Sbjct: 191 QTEKEAEREKEAETEKEAKTEKEAETEKEAQTEKEAETQKEAEKQKEAETEKEAETEKEA 250
Query: 427 KEVVQSSDERVANS 468
+ ++ E+ A +
Sbjct: 251 ETEKKAETEKEAET 264
>SB_23744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLS-----ESSNQRVHNRKTIKEK 384
GV T ++ + DS +E ER ERLS E N+ + NRK ++E+
Sbjct: 100 GVVTTDRKTIDDHNTSDSRRQEARERNEERLSEIDELERENRELENRKPLRER 152
>SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEP-GERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGE 417
G QP Q Q P + K+P G++P + + NQ + T D + P +
Sbjct: 93 GQQPNQPTGQQPNQPTGQQPKDPTGQQPNDPTGKQFNQPTGQQLT------DPTGQQPTD 146
Query: 418 QDVKEVVQSSDERVANSQTQ 477
++++ + ++ NS+ Q
Sbjct: 147 PTGEQIIDPTGQQPTNSKRQ 166
>SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1)
Length = 355
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
QE+ QA P + K +P E+ +++ R +RKT K D + + +
Sbjct: 279 QEKDKQAARPRQASRKTKTSKPQEKDNQAERPRQASRKTKTRKPRDQDKKAARPRQASRK 338
Query: 436 VQSSDERVANSQ 471
+ S + N Q
Sbjct: 339 TKISKPQDQNKQ 350
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEK--HSDSESEIPGEQ 420
QP +E+S Q E+PV+ E K+ E E E +R R+T +E+ + + E P E+
Sbjct: 183 QPVEEKSKQ-EEPVEEEPKQK-ELVGE---EPKTRRTSRRRTKQEEIVEEEPKQEGPVEE 237
Query: 421 DVKEVVQSSDER 456
+ ++ ER
Sbjct: 238 ETRQEEPDEKER 249
>SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEP-GERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGE 417
G QP Q Q DP + +P G++P + + NQ + T +D + P
Sbjct: 66 GQQPNQPTGQQPTDPTGQQPNDPTGQQPTDPTGQQPNQPTGQQPT---DTTDQQPNQPTG 122
Query: 418 QDVKEVVQSSDERVANSQ 471
Q + D + Q
Sbjct: 123 QQPTDTTDQQDNEPESQQ 140
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +1
Query: 238 VGVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGE 417
V +QP E + AE + E E P +R+S ++ + R +E+ SDSE E G
Sbjct: 345 VQMQPIPEDAFPAESDNEDE-----EDPNQRISIRASDK---RIACEEEFSDSEDEGEGR 396
Query: 418 QDVKE 432
+DV+E
Sbjct: 397 RDVRE 401
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 TQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
+ R S+ E + K P R ER + R R +EK + E + + D +E
Sbjct: 252 SSSRESKRERRSEEREKRPRSRERERSRDRERSRDRERDRTREKSPEREKDRDRDLDEEE 311
Query: 433 VVQS-SDERVANSQTQLNFSMVNV 501
+ + ER + Q + + V
Sbjct: 312 LAEKRRQERKLRERDQAYYERLKV 335
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 316 RPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSDERVANSQTQLNFSMV 495
R RL+ + N+K KEK E+ +PG+ K+ V+S+ N T+L
Sbjct: 152 RASARLASKQENILTNKKLAKEKIERKENTLPGD---KKAVKSN-----NGSTKLANKQE 203
Query: 496 NVGAN 510
N+G N
Sbjct: 204 NIGPN 208
>SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDV 426
Q + S+ + P + K+ + P+R S SS+ RKT K++H +S Q
Sbjct: 58 QSSSSSSTTSSSP-ERNIKKKSSKAPKRQSSSSSSSSPKRKTKKKQHR-LKSGNTRSQTS 115
Query: 427 KEVVQSSDERVANSQT 474
SS ER + ++T
Sbjct: 116 SSSAASSPERKSGNKT 131
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +1
Query: 241 GVQPTQERS-SQAEDPVDSEAKEPGERPPERLSESSN----QRVHNRKTIKEKHSDSESE 405
G +P +E++ SQA VD E K G + + SSN + + T KE SDS +
Sbjct: 753 GGEPKKEKNVSQAASNVDKEQKSSGSTSDSKNTNSSNGNKEKLLSQISTPKETLSDSTDK 812
Query: 406 IPGEQDVKEVVQSSDERVANSQTQLNFSMVNVGANYL 516
P V E+ + D R ++TQ N + N + L
Sbjct: 813 RP----VLELPRPVDNR-KPAETQDNSEVPNKSVSRL 844
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 289 DSEAKEPGERPPERLSESSNQRVHN-RKTIKEKHSDSESEIPGEQDVKEVVQSSDERV 459
+ + KE E E +E+ N+ +T KEK + E+E E++ +V + ++ER+
Sbjct: 62 EKKKKEEEEEEEEEETEAVNEEEEKIEETEKEKDEEEENEEEEEEEEDKVEERNEERL 119
>SB_33739| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 247
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLS-----ESSNQRVHNRKTIKEK 384
GV T + + +S +E ER ERLS ES N+ + NRK ++E+
Sbjct: 155 GVVTTDRETIDDSNTSESGRQEARERNKERLSEIDELESENRELENRKPLRER 207
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD 423
Q Q++ QAE P + K P ++ +++ R +RKT K S+ + +QD
Sbjct: 9 QDKQDQVKQAERPRQASHKTKTSNPQDQDKQAARPRQASRKTKTSKTKTSKPQDQDKQD 67
>SB_35737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLS-----ESSNQRVHNRKTIKEKHSDSESE 405
GV T + + +S +E ER ERLS E N+ + N+K ++E+ +
Sbjct: 120 GVVATDRETIDDPNTSESSRQEARERNEERLSEIDELERENRELENQKPLRERIKAIFKK 179
Query: 406 IPGEQDVKEVVQSSDER 456
+ + + V +S DER
Sbjct: 180 VRLYRHRRRVGRSDDER 196
>SB_3982| Best HMM Match : DUF1311 (HMM E-Value=2.2)
Length = 803
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 286 VDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHS-DSESEIPGEQDVKEVVQSSDE 453
VD K E+ P SE+ N + R+T KHS DSE E GE+ KE+ S++E
Sbjct: 32 VDDWDKTHAEKSPNA-SETGNTEI--RETNSRKHSADSEDE-NGERCKKELTCSTEE 84
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 295 EAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDV-KEVVQSSDERVANSQ 471
+A E ++ E L + Q K + EK+ D +E + DV K ++ + + N+Q
Sbjct: 237 DAPEKNQKQVEELEKKIQQLEEKEKQLMEKNKDV-NETKSKMDVAKSELEIYNSQHKNAQ 295
Query: 472 TQLNFSMVNV 501
TQL + N+
Sbjct: 296 TQLREAHANL 305
>SB_30427| Best HMM Match : bZIP_2 (HMM E-Value=4.3)
Length = 169
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLS-----ESSNQRVHNRKTIKEKHSDSESE 405
GV T + + +S +E ER ERLS E N+ + N+K ++E+ +
Sbjct: 23 GVVATDRETIDDPNTSESSRQEARERNEERLSEIDELERENRELENQKPLRERIKAIFKK 82
Query: 406 IPGEQDVKEVVQSSDER 456
+ + + V +S DER
Sbjct: 83 VRLYRHRRRVGRSDDER 99
>SB_30423| Best HMM Match : Filament (HMM E-Value=3.3)
Length = 355
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLS-----ESSNQRVHNRKTIKEKHSDSESE 405
GV T + + +S +E ER ERLS E N+ + N+K ++E+ +
Sbjct: 261 GVVATDRETIDDPNTSESSRQEARERNEERLSEIDELERENRELENQKPLRERIKAIFKK 320
Query: 406 IPGEQDVKEVVQSSDER 456
+ + + V +S DER
Sbjct: 321 VRLYRHRRRVGRSDDER 337
>SB_49499| Best HMM Match : Ribosomal_S9 (HMM E-Value=1.2)
Length = 286
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLS-----ESSNQRVHNRKTIKEK 384
GV T +S + +S +E ER ERLS E N+ + N+K ++E+
Sbjct: 166 GVVATDRETSDDPNTSESRRQEARERNEERLSEIDELERENRELENQKPLRER 218
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +1
Query: 277 EDPVDSEAKEP--GERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD---VKEVVQ 441
+DP EA E + LSE NQ NR + + + S +++PG + +KE+
Sbjct: 1320 QDPFSPEALRDIKDENSTQALSEDPNQYSINRLSERVQASMPNTQVPGTFEKFPLKELSS 1379
Query: 442 SSDERVAN 465
S + VAN
Sbjct: 1380 GSQDIVAN 1387
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 278 KTP*TRRPKNQESDRLNDYQKAQTSECTTGRRSKKNI---VILNLR 406
KTP T++P+ S R + K T R+SKK++ +I NL+
Sbjct: 1551 KTPATKKPEVPFSQRATETTKKNEPHLETERKSKKDLTEPIIANLK 1596
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 277 EDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSD 393
++P+DS PG R P + ESS R ++ ++ +D
Sbjct: 919 QEPIDSTLNLPGYRKPVKRVESSEDRPDTPQSTNQRPND 957
>SB_8451| Best HMM Match : GRP (HMM E-Value=9.6)
Length = 158
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 213 HGRAHQAQAGHVLADGHKPIGGGQHVEEVAL 121
H HQ + H GH +GGG H E + +
Sbjct: 117 HHHHHQHRGCHKAVAGHVRLGGGHHTETLRI 147
>SB_3290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLS-----ESSNQRVHNRKTIKEK 384
GV T ++ + +S +E ER ERLS E N+ + NRK ++E+
Sbjct: 170 GVVATDRKTIDDPNTSESRRQEARERNEERLSEFDELERKNRELENRKPLRER 222
>SB_867| Best HMM Match : Leo1 (HMM E-Value=0)
Length = 591
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIK-EKHSDSESE 405
+ER A++ DSE + E +RL N R +KT K + SD+ES+
Sbjct: 541 EERLMNAKEGKDSEEESIEEPSRKRLLSEGNTRKEKKKTKKIIESSDNESD 591
>SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD 423
Q+R QA P + K +P ++ +++ R +RKT K D+ QD
Sbjct: 102 QDRDKQAARPRQASRKTETSKPQDQDKQAARPRQASRKTETSKPQDTRQASRKTQD 157
>SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06)
Length = 222
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD 423
VQ + +R S +D + + + +R +E + K +EK + E E+ E++
Sbjct: 128 VQGSNKRPSSGDDTDGATPVKVSKMDLQREAEKRRKNNEASKRTREKRRNKEQELLKEKE 187
Query: 424 VKE 432
+KE
Sbjct: 188 IKE 190
>SB_35437| Best HMM Match : DUF1212 (HMM E-Value=1.5)
Length = 184
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +1
Query: 241 GVQPTQERSSQAEDPVDSEAKEPGERPPERLSE-----SSNQRVHNRKTIKEK 384
GV T + + +S +E ER ERLSE S N+ + N+K ++E+
Sbjct: 39 GVVATDRETIDDPNTSESRRQEARERNEERLSEIDELKSENRELENQKPLRER 91
>SB_14526| Best HMM Match : Drf_FH1 (HMM E-Value=0.16)
Length = 517
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 250 PTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKT--IKEKHSDSESEIPGEQD 423
P+ E + + P +EP + PP + S + N +K K+ DS + PG +
Sbjct: 320 PSLETPTSEDTPAAEYVEEPNQSPPTLTNTSPKDKSTNTPIDGVKTKNIDS-IQNPGTAN 378
Query: 424 VKEVVQS 444
KEV ++
Sbjct: 379 NKEVPEN 385
>SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 647
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 289 DSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPG-EQDVKEVVQSSDERVAN 465
D+E ER R E+ NQ+ IK ++ + ESEI ++ + V+ ++++
Sbjct: 246 DAEVVRDYERRLLRCKEALNQKNSECARIKRENVELESEIEQLKESHQAAVEVYNKQIDE 305
Query: 466 SQTQLN 483
S+T LN
Sbjct: 306 SKTSLN 311
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
Q+R Q E D E ++ G+ + S+S N++ K S+ P E+D +
Sbjct: 1059 QDRREQREREEDREPRD-GKGRQRQPSDSRKPNAWNKENRGSKEDISKKLTPREKDSESK 1117
Query: 436 VQSSDER 456
+S D+R
Sbjct: 1118 ERSCDQR 1124
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 259 ERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD 423
+ S E DSE K+ +R +R + RK +KE S+SE E E D
Sbjct: 656 DESESEESSDDSEVKKRPKRNAKRNQKKGKMAKGKRKRVKEM-SESEDENEEEPD 709
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPG-ERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
+E+ + D E KE E+ ER+ + + RK KE+ + E E++ +E
Sbjct: 119 EEKDIPRDKKSDKELKEEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKKEEKESRE 178
Query: 433 VVQSSDE 453
++ E
Sbjct: 179 KEKTKKE 185
>SB_11170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/73 (19%), Positives = 35/73 (47%)
Frame = +1
Query: 421 DVKEVVQSSDERVANSQTQLNFSMVNVGANYLLVHVLGYAAMNSPVLFTQLGAKYFSLPS 600
D+ +++ ++ + +L + +G Y+ H +G + + + +K+F+LPS
Sbjct: 7 DISALLEGKEDEIPMLVDELGKACEQLGLFYITGHTIGDELIEK---LSDVQSKFFALPS 63
Query: 601 EVSVYYGLCVTSA 639
+V G+ + A
Sbjct: 64 DVKESLGIMKSKA 76
>SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089)
Length = 374
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 298 AKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
AKE ER P R ++ +R+ N+ +KEK + E
Sbjct: 11 AKEANERAPTRTMKALVERLRNQLALKEKQQKLKVE 46
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.129 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,438,037
Number of Sequences: 59808
Number of extensions: 335932
Number of successful extensions: 1248
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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