Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0339
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006383-1|AAH06383.2| 561|Homo sapiens GPAA1 protein protein. 59 1e-08
BC004129-1|AAH04129.1| 621|Homo sapiens glycosylphosphatidylino... 59 1e-08
BC003171-1|AAH03171.1| 621|Homo sapiens glycosylphosphatidylino... 59 1e-08
AB006969-1|BAA24035.1| 621|Homo sapiens hGAA1 protein. 59 1e-08
AB002137-1|BAA82590.1| 621|Homo sapiens glycosylphosphatidylino... 59 1e-08
AB002135-1|BAA82588.1| 621|Homo sapiens glycosylphosphatidylino... 59 1e-08
BC025330-1|AAH25330.1| 1025|Homo sapiens C14orf43 protein protein. 37 0.089
BC015668-1|AAH15668.1| 1024|Homo sapiens C14orf43 protein protein. 37 0.089
BC009202-1|AAH09202.1| 1024|Homo sapiens C14orf43 protein protein. 37 0.089
BC006511-1|AAH06511.1| 1036|Homo sapiens C14orf43 protein protein. 37 0.089
AK127785-1|BAC87133.1| 1019|Homo sapiens protein ( Homo sapiens ... 37 0.089
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 36 0.12
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 36 0.12
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 36 0.12
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 36 0.21
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 33 0.83
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 33 0.83
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 33 1.1
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 33 1.1
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 33 1.1
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 33 1.1
AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens ... 33 1.4
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 32 1.9
U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein. 32 1.9
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 32 1.9
BC053889-1|AAH53889.1| 1553|Homo sapiens EP300 protein protein. 32 1.9
BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein. 32 1.9
AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p30... 32 1.9
AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p30... 32 1.9
AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p30... 32 1.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 1.9
AB016089-1|BAA83715.1| 253|Homo sapiens RNA binding protein pro... 32 1.9
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 32 1.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 1.9
Z47038-1|CAA87104.1| 286|Homo sapiens putative microtubule-asso... 32 2.5
U41371-1|AAA97461.1| 872|Homo sapiens spliceosome associated pr... 32 2.5
BX537771-1|CAD97834.1| 799|Homo sapiens hypothetical protein pr... 32 2.5
BC053577-1|AAH53577.1| 877|Homo sapiens SF3B2 protein protein. 32 2.5
BC024031-1|AAH24031.1| 344|Homo sapiens tripartite motif-contai... 32 2.5
BC013166-1|AAH13166.1| 344|Homo sapiens tripartite motif-contai... 32 2.5
BC007610-1|AAH07610.1| 636|Homo sapiens SF3B2 protein protein. 32 2.5
BC000401-1|AAH00401.2| 894|Homo sapiens SF3B2 protein protein. 32 2.5
AJ249128-1|CAB65108.1| 344|Homo sapiens DIPB protein protein. 32 2.5
U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated pr... 31 5.8
L42542-1|AAB00103.1| 655|Homo sapiens RLIP76 protein protein. 31 5.8
BC094702-1|AAH94702.1| 627|Homo sapiens MAP1A protein protein. 31 5.8
BC013126-1|AAH13126.1| 655|Homo sapiens ralA binding protein 1 ... 31 5.8
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 31 5.8
AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related p... 31 5.8
AF095910-1|AAF03480.1| 378|Homo sapiens microtubule-associated ... 31 5.8
AF084479-1|AAD08675.1| 1483|Homo sapiens Williams-Beuren syndrom... 31 5.8
AF072810-1|AAC97879.1| 1425|Homo sapiens transcription factor WS... 31 5.8
AB209924-1|BAD93161.1| 462|Homo sapiens ralA binding protein 1 ... 31 5.8
AB032253-1|BAA89210.1| 1527|Homo sapiens bromodomain adjacent to... 31 5.8
AK131277-1|BAD18454.1| 547|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK097681-1|BAC05141.1| 455|Homo sapiens protein ( Homo sapiens ... 30 7.7
AB089940-1|BAD02449.1| 998|Homo sapiens N-acetylgalactosaminylt... 30 7.7
>BC006383-1|AAH06383.2| 561|Homo sapiens GPAA1 protein protein.
Length = 561
Score = 59.3 bits (137), Expect = 1e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 61 LGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYMPS 189
+G ALE + R LN+LLE HQS+F Y+LP RFVSIG YMP+
Sbjct: 275 VGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPA 317
>BC004129-1|AAH04129.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment protein 1
homolog (yeast) protein.
Length = 621
Score = 59.3 bits (137), Expect = 1e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 61 LGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYMPS 189
+G ALE + R LN+LLE HQS+F Y+LP RFVSIG YMP+
Sbjct: 335 VGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPA 377
>BC003171-1|AAH03171.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment protein 1
homolog (yeast) protein.
Length = 621
Score = 59.3 bits (137), Expect = 1e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 61 LGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYMPS 189
+G ALE + R LN+LLE HQS+F Y+LP RFVSIG YMP+
Sbjct: 335 VGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPA 377
>AB006969-1|BAA24035.1| 621|Homo sapiens hGAA1 protein.
Length = 621
Score = 59.3 bits (137), Expect = 1e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 61 LGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYMPS 189
+G ALE + R LN+LLE HQS+F Y+LP RFVSIG YMP+
Sbjct: 335 VGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPA 377
>AB002137-1|BAA82590.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
protein.
Length = 621
Score = 59.3 bits (137), Expect = 1e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 61 LGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYMPS 189
+G ALE + R LN+LLE HQS+F Y+LP RFVSIG YMP+
Sbjct: 335 VGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPA 377
>AB002135-1|BAA82588.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
protein.
Length = 621
Score = 59.3 bits (137), Expect = 1e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 61 LGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYMPS 189
+G ALE + R LN+LLE HQS+F Y+LP RFVSIG YMP+
Sbjct: 335 VGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPA 377
>BC025330-1|AAH25330.1| 1025|Homo sapiens C14orf43 protein protein.
Length = 1025
Score = 36.7 bits (81), Expect = 0.089
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSES-SNQRVHNRKTIKEKHSDSESEIPGEQ 420
V + E+S+Q E VD + + R P ES S +R+ ++ +KE + E E+P Q
Sbjct: 891 VDTSDEKSAQEEVEVDIKTSQKFPRVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQ 950
Query: 421 DVKEVVQSSDER 456
+ KE + ER
Sbjct: 951 E-KEEQEEGRER 961
>BC015668-1|AAH15668.1| 1024|Homo sapiens C14orf43 protein protein.
Length = 1024
Score = 36.7 bits (81), Expect = 0.089
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSES-SNQRVHNRKTIKEKHSDSESEIPGEQ 420
V + E+S+Q E VD + + R P ES S +R+ ++ +KE + E E+P Q
Sbjct: 891 VDTSDEKSAQEEVEVDIKTSQKFPRVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQ 950
Query: 421 DVKEVVQSSDER 456
+ KE + ER
Sbjct: 951 E-KEEQEEGRER 961
>BC009202-1|AAH09202.1| 1024|Homo sapiens C14orf43 protein protein.
Length = 1024
Score = 36.7 bits (81), Expect = 0.089
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSES-SNQRVHNRKTIKEKHSDSESEIPGEQ 420
V + E+S+Q E VD + + R P ES S +R+ ++ +KE + E E+P Q
Sbjct: 891 VDTSDEKSAQEEVEVDIKTSQKFPRVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQ 950
Query: 421 DVKEVVQSSDER 456
+ KE + ER
Sbjct: 951 E-KEEQEEGRER 961
>BC006511-1|AAH06511.1| 1036|Homo sapiens C14orf43 protein protein.
Length = 1036
Score = 36.7 bits (81), Expect = 0.089
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSES-SNQRVHNRKTIKEKHSDSESEIPGEQ 420
V + E+S+Q E VD + + R P ES S +R+ ++ +KE + E E+P Q
Sbjct: 902 VDTSDEKSAQEEVEVDIKTSQKFPRVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQ 961
Query: 421 DVKEVVQSSDER 456
+ KE + ER
Sbjct: 962 E-KEEQEEGRER 972
>AK127785-1|BAC87133.1| 1019|Homo sapiens protein ( Homo sapiens cDNA
FLJ45886 fis, clone OCBBF3021361, moderately similar to
Rapa-1. ).
Length = 1019
Score = 36.7 bits (81), Expect = 0.089
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSES-SNQRVHNRKTIKEKHSDSESEIPGEQ 420
V + E+S+Q E VD + + R P ES S +R+ ++ +KE + E E+P Q
Sbjct: 891 VDTSDEKSAQEEVEVDIKTSQKFPRVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQ 950
Query: 421 DVKEVVQSSDER 456
+ KE + ER
Sbjct: 951 E-KEEQEEGRER 961
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 262 RSSQAEDPVDSEAKEPGERPPERLSESSNQRVHN----RKTIKEKHSDSESEIPGEQDVK 429
+S +A+ P EA+ P ++ PE+ + V + + +KE E EIP +++VK
Sbjct: 768 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVK 827
Query: 430 EVVQSSDE 453
V+ ++
Sbjct: 828 SPVKEEEK 835
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 262 RSSQAEDPVDSEAKEPGERPPERLSESSNQRVHN----RKTIKEKHSDSESEIPGEQDVK 429
+S +A+ P EA+ P ++ PE+ + V + + +KE E EIP +++VK
Sbjct: 768 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVK 827
Query: 430 EVVQSSDE 453
V+ ++
Sbjct: 828 SPVKEEEK 835
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 262 RSSQAEDPVDSEAKEPGERPPERLSESSNQRVHN----RKTIKEKHSDSESEIPGEQDVK 429
+S +A+ P EA+ P ++ PE+ + V + + +KE E EIP +++VK
Sbjct: 776 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVK 835
Query: 430 EVVQSSDE 453
V+ ++
Sbjct: 836 SPVKEEEK 843
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 35.5 bits (78), Expect = 0.21
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD 423
V+ + +A+ PV EAK P E+ + E + + +KE+ E EIP +++
Sbjct: 99 VKEEAKSPEKAKSPVKEEAKSP-EKAKSPVKEEAKTPEKAKSPVKEEAKAPEKEIPKKEE 157
Query: 424 VKEVVQSSDE 453
VK V+ ++
Sbjct: 158 VKSPVKEEEK 167
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 33.5 bits (73), Expect = 0.83
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 253 TQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEI--PGEQDV 426
T +R+S+A+ DSE E E + S+SSN +I++ SDSESE E +
Sbjct: 739 TAKRNSKAKGKSDSEDGEK-ENEKSKTSDSSNDE---SSSIEDSSSDSESESEPESESES 794
Query: 427 KEVVQSSDERVANSQTQL 480
+ V + +++ +T L
Sbjct: 795 RRVTKEKEKKTKQDRTPL 812
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 33.5 bits (73), Expect = 0.83
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 253 TQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEI--PGEQDV 426
T +R+S+A+ DSE E E + S+SSN +I++ SDSESE E +
Sbjct: 739 TAKRNSKAKGKSDSEDGEK-ENEKSKTSDSSNDE---SSSIEDSSSDSESESEPESESES 794
Query: 427 KEVVQSSDERVANSQTQL 480
+ V + +++ +T L
Sbjct: 795 RRVTKEKEKKTKQDRTPL 812
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
+ + S++ P + ++ ++ ER + + +K K+K D E + ++DVK+V
Sbjct: 362 KRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQV 421
Query: 436 VQSSDE 453
+ DE
Sbjct: 422 TRDYDE 427
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
+ + S++ P + ++ ++ ER + + +K K+K D E + ++DVK+V
Sbjct: 210 KRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQV 269
Query: 436 VQSSDE 453
+ DE
Sbjct: 270 TRDYDE 275
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
+ + S++ P + ++ ++ ER + + +K K+K D E + ++DVK+V
Sbjct: 302 KRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQV 361
Query: 436 VQSSDE 453
+ DE
Sbjct: 362 TRDYDE 367
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
+ + S++ P + ++ ++ ER + + +K K+K D E + ++DVK+V
Sbjct: 362 KRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQV 421
Query: 436 VQSSDE 453
+ DE
Sbjct: 422 TRDYDE 427
>AK000868-1|BAA91402.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ10006 fis, clone HEMBA1000168, weakly similar to
CYLICIN I. ).
Length = 489
Score = 32.7 bits (71), Expect = 1.4
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIP--GE 417
VQ ++ S ED V+ + ER SE+ N + K + SDSESE P +
Sbjct: 19 VQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDSENEELPKPRISDSESEDPPRNQ 78
Query: 418 QDVKEVVQSSDERVANSQTQ 477
E + RV++S+++
Sbjct: 79 ASDSENEELPKPRVSDSESE 98
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 32.3 bits (70), Expect = 1.9
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 253 TQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEI-PGEQDVK 429
T +R+S+A+ DSE E E + S+SSN +I++ SDSESE P +
Sbjct: 739 TAKRNSKAKGKSDSEDGEK-ENEKSKTSDSSNDE---SSSIEDSSSDSESESEPESESES 794
Query: 430 EVVQSSDERVANSQTQL 480
V E+ +T L
Sbjct: 795 RRVTKEKEKTKQDRTPL 811
>U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein.
Length = 2414
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKT-IKEKHSDSESEIPGEQD 423
QP+QE +A+ VD EP + PE +SES + T +E+ ++ ++EI E+D
Sbjct: 971 QPSQEVKMEAKMEVDQP--EPADTQPEDISESKVEDCKMESTETEERSTELKTEIKEEED 1028
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 265 SSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
SS + P + K+ ++ R SESS+ R +K+ K+K SESE
Sbjct: 177 SSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESE 223
>BC053889-1|AAH53889.1| 1553|Homo sapiens EP300 protein protein.
Length = 1553
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKT-IKEKHSDSESEIPGEQD 423
QP+QE +A+ VD EP + PE +SES + T +E+ ++ ++EI E+D
Sbjct: 971 QPSQEVKMEAKMEVDQP--EPADTQPEDISESKVEDCKMESTETEERSTELKTEIKEEED 1028
>BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein.
Length = 311
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 265 SSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
SS + P + K+ ++ R SESS+ R +K+ K+K SESE
Sbjct: 81 SSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESE 127
>AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKT-IKEKHSDSESEIPGEQD 423
QP+QE +A+ VD EP + PE +SES + T +E+ ++ ++EI E+D
Sbjct: 971 QPSQEVKMEAKMEVDQP--EPADTQPEDISESKVEDCKMESTETEERSTELKTEIKEEED 1028
>AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKT-IKEKHSDSESEIPGEQD 423
QP+QE +A+ VD EP + PE +SES + T +E+ ++ ++EI E+D
Sbjct: 971 QPSQEVKMEAKMEVDQP--EPADTQPEDISESKVEDCKMESTETEERSTELKTEIKEEED 1028
>AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKT-IKEKHSDSESEIPGEQD 423
QP+QE +A+ VD EP + PE +SES + T +E+ ++ ++EI E+D
Sbjct: 971 QPSQEVKMEAKMEVDQP--EPADTQPEDISESKVEDCKMESTETEERSTELKTEIKEEED 1028
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 265 SSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
SS + P + K+ ++ R SESS+ R +K+ K+K SESE
Sbjct: 177 SSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESE 223
>AB016089-1|BAA83715.1| 253|Homo sapiens RNA binding protein
protein.
Length = 253
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 265 SSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
SS + P + K+ ++ R SESS+ R +K+ K+K SESE
Sbjct: 177 SSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESE 223
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 265 SSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
SS + P + K+ ++ R SESS+ R +K+ K+K SESE
Sbjct: 142 SSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESE 188
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 265 SSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
SS + P + K+ ++ R SESS+ R +K+ K+K SESE
Sbjct: 225 SSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESE 271
>Z47038-1|CAA87104.1| 286|Homo sapiens putative
microtubule-associated protein 1A protein.
Length = 286
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 256 QERSSQAEDPVDSE--AKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK 429
+ RS A++ +E AKE E+PPE+ ++ + + + +K + + G++ +K
Sbjct: 214 EARSELAKELAKTEKKAKESSEKPPEKPAKPERVKTESSEALKAEKRKLIKDKVGKKHLK 273
Query: 430 EVVQSSDERVANS 468
E + +++ NS
Sbjct: 274 EKISKLEKKKRNS 286
>U41371-1|AAA97461.1| 872|Homo sapiens spliceosome associated
protein protein.
Length = 872
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 295 EAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
+ K+ E+ PE+L + N +K +E+H DS+ + ++ K+
Sbjct: 375 DVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSDDDSSDDEQEKK 420
>BX537771-1|CAD97834.1| 799|Homo sapiens hypothetical protein
protein.
Length = 799
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 295 EAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
+ K+ E+ PE+L + N +K +E+H DS+ + ++ K+
Sbjct: 302 DVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSDDDSSDDEQEKK 347
>BC053577-1|AAH53577.1| 877|Homo sapiens SF3B2 protein protein.
Length = 877
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 295 EAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
+ K+ E+ PE+L + N +K +E+H DS+ + ++ K+
Sbjct: 398 DVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSDDDSSDDEQEKK 443
>BC024031-1|AAH24031.1| 344|Homo sapiens tripartite
motif-containing 44 protein.
Length = 344
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQ- 420
V+ QER ++E +SE++E E E +E ++ ++ +E DSE E+ EQ
Sbjct: 83 VKVEQEREIESEAGEESESEEESESEEESETEEESED----ESDEESEEDSEEEMEDEQE 138
Query: 421 -DVKEVVQSSDERVANSQTQ 477
+ +E Q E A +T+
Sbjct: 139 SEAEEDNQEEGESEAEGETE 158
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 271 QAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSD 450
+AE V+ E + E E SE ++ +T E+ S+ ES+ E+D +E ++
Sbjct: 80 EAEVKVEQEREIESEAGEESESEEESESEEESET--EEESEDESDEESEEDSEEEMEDEQ 137
Query: 451 ERVANSQTQ 477
E A Q
Sbjct: 138 ESEAEEDNQ 146
>BC013166-1|AAH13166.1| 344|Homo sapiens tripartite
motif-containing 44 protein.
Length = 344
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQ- 420
V+ QER ++E +SE++E E E +E ++ ++ +E DSE E+ EQ
Sbjct: 83 VKVEQEREIESEAGEESESEEESESEEESETEEESED----ESDEESEEDSEEEMEDEQE 138
Query: 421 -DVKEVVQSSDERVANSQTQ 477
+ +E Q E A +T+
Sbjct: 139 SEAEEDNQEEGESEAEGETE 158
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 271 QAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSD 450
+AE V+ E + E E SE ++ +T E+ S+ ES+ E+D +E ++
Sbjct: 80 EAEVKVEQEREIESEAGEESESEEESESEEESET--EEESEDESDEESEEDSEEEMEDEQ 137
Query: 451 ERVANSQTQ 477
E A Q
Sbjct: 138 ESEAEEDNQ 146
>BC007610-1|AAH07610.1| 636|Homo sapiens SF3B2 protein protein.
Length = 636
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 295 EAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
+ K+ E+ PE+L + N +K +E+H DS+ + ++ K+
Sbjct: 139 DVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSDDDSSDDEQEKK 184
>BC000401-1|AAH00401.2| 894|Homo sapiens SF3B2 protein protein.
Length = 894
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 295 EAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKE 432
+ K+ E+ PE+L + N +K +E+H DS+ + ++ K+
Sbjct: 397 DVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSDDDSSDDEQEKK 442
>AJ249128-1|CAB65108.1| 344|Homo sapiens DIPB protein protein.
Length = 344
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQ- 420
V+ QER ++E +SE++E E E +E ++ ++ +E DSE E+ EQ
Sbjct: 83 VKVEQEREIESEAGEESESEEESESEEESETEEESED----ESDEESEEDSEEEMEDEQE 138
Query: 421 -DVKEVVQSSDERVANSQTQ 477
+ +E Q E A +T+
Sbjct: 139 SEAEEDNQEEGESEAEGETE 158
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 271 QAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSD 450
+AE V+ E + E E SE ++ +T E+ S+ ES+ E+D +E ++
Sbjct: 80 EAEVKVEQEREIESEAGEESESEEESESEEESET--EEESEDESDEESEEDSEEEMEDEQ 137
Query: 451 ERVANSQTQ 477
E A Q
Sbjct: 138 ESEAEEDNQ 146
>U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated
protein 1A protein.
Length = 1604
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 QERSSQAEDPVDSE--AKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK 429
+ RS A++ +E AKE E+PPE+ ++ + + + +K + + G++ +K
Sbjct: 270 EARSELAKELAKTEKKAKESSEKPPEKPAKPERVKTESSEALKAEKRKLIKDKVGKKHLK 329
Query: 430 EVVQSSDER 456
E + +E+
Sbjct: 330 EKISKLEEK 338
>L42542-1|AAB00103.1| 655|Homo sapiens RLIP76 protein protein.
Length = 655
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 301 KEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK---EVVQSSDERVANSQ 471
KE ER ++E +++ H R +E S+SESE E++++ E +Q +E +
Sbjct: 511 KEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKN 570
Query: 472 TQLN 483
LN
Sbjct: 571 NHLN 574
>BC094702-1|AAH94702.1| 627|Homo sapiens MAP1A protein protein.
Length = 627
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 QERSSQAEDPVDSE--AKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK 429
+ RS A++ +E AKE E+PPE+ ++ + + + +K + + G++ +K
Sbjct: 347 EARSELAKELAKTEKKAKESSEKPPEKPAKPERVKTESSEALKAEKRKLIKDKVGKKHLK 406
Query: 430 EVVQSSDER 456
E + +E+
Sbjct: 407 EKISKLEEK 415
>BC013126-1|AAH13126.1| 655|Homo sapiens ralA binding protein 1
protein.
Length = 655
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 301 KEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK---EVVQSSDERVANSQ 471
KE ER ++E +++ H R +E S+SESE E++++ E +Q +E +
Sbjct: 511 KEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKN 570
Query: 472 TQLN 483
LN
Sbjct: 571 NHLN 574
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 253 TQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD 423
T +R+S+A+ DSE E E + S+SSN +I++ SDSESE E +
Sbjct: 739 TAKRNSKAKGKSDSEDGEK-ENEKSKTSDSSNDE---SSSIEDSSSDSESESEPESE 791
>AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related
protein P80 protein.
Length = 1825
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 QERSSQAEDPVDSE--AKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK 429
+ RS A++ +E AKE E+PPE+ ++ + + + +K + + G++ +K
Sbjct: 347 EARSELAKELAKTEKKAKESSEKPPEKPAKPERVKTESSEALKAEKRKLIKDKVGKKHLK 406
Query: 430 EVVQSSDER 456
E + +E+
Sbjct: 407 EKISKLEEK 415
>AF095910-1|AAF03480.1| 378|Homo sapiens microtubule-associated
protein 1A like protein protein.
Length = 378
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 QERSSQAEDPVDSE--AKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK 429
+ RS A++ +E AKE E+PPE+ ++ + + + +K + + G++ +K
Sbjct: 56 EARSELAKELAKTEKKAKESSEKPPEKPAKPERVKTESSEALKAEKRKLIKDKVGKKHLK 115
Query: 430 EVVQSSDER 456
E + +E+
Sbjct: 116 EKISKLEEK 124
>AF084479-1|AAD08675.1| 1483|Homo sapiens Williams-Beuren syndrome
deletion transcript 9 protein.
Length = 1483
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 253 TQERSSQ--AEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHS 390
T+E +S+ +D D E +E E E E + R+ RKTI+ KHS
Sbjct: 1246 TEESASEDSEDDESDEEEEEEEEEEEEEDYEVAGLRLRPRKTIRGKHS 1293
>AF072810-1|AAC97879.1| 1425|Homo sapiens transcription factor WSTF
protein.
Length = 1425
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 253 TQERSSQ--AEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHS 390
T+E +S+ +D D E +E E E E + R+ RKTI+ KHS
Sbjct: 1246 TEESASEDSEDDESDEEEEEEEEEEEEEDYEVAGLRLRPRKTIRGKHS 1293
>AB209924-1|BAD93161.1| 462|Homo sapiens ralA binding protein 1
variant protein.
Length = 462
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 301 KEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK---EVVQSSDERVANSQ 471
KE ER ++E +++ H R +E S+SESE E++++ E +Q +E +
Sbjct: 318 KEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKN 377
Query: 472 TQLN 483
LN
Sbjct: 378 NHLN 381
>AB032253-1|BAA89210.1| 1527|Homo sapiens bromodomain adjacent to zinc
finger domain 1B protein.
Length = 1527
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 253 TQERSSQ--AEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHS 390
T+E +S+ +D D E +E E E E + R+ RKTI+ KHS
Sbjct: 1246 TEESASEDSEDDESDEEEEEEEEEEEEEDYEVAGLRLRPRKTIRGKHS 1293
>AK131277-1|BAD18454.1| 547|Homo sapiens protein ( Homo sapiens
cDNA FLJ16224 fis, clone CTONG3009287. ).
Length = 547
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1
Query: 150 GGQHVEEVALVEGLQQVVEGAEDGLEREAEAVEVSGGERVHAR 22
GG+++ E+ L+E Q+VV +E R + ++ +GGE V AR
Sbjct: 255 GGRYLLELELLEQGQRVVRLSEYVSARGWQGIDPAGGEEVEAR 297
>AK097681-1|BAC05141.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ40362 fis, clone TESTI2034506. ).
Length = 455
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1
Query: 150 GGQHVEEVALVEGLQQVVEGAEDGLEREAEAVEVSGGERVHAR 22
GG+++ E+ L+E Q+VV +E R + ++ +GGE V AR
Sbjct: 163 GGRYLLELELLEQGQRVVRLSEYVSARGWQGIDPAGGEEVEAR 205
>AB089940-1|BAD02449.1| 998|Homo sapiens
N-acetylgalactosaminyltransferase protein.
Length = 998
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1
Query: 150 GGQHVEEVALVEGLQQVVEGAEDGLEREAEAVEVSGGERVHAR 22
GG+++ E+ L+E Q+VV +E R + ++ +GGE V AR
Sbjct: 706 GGRYLLELELLEQGQRVVRLSEYVSARGWQGIDPAGGEEVEAR 748
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.129 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,560,110
Number of Sequences: 237096
Number of extensions: 1682197
Number of successful extensions: 5022
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 4590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5009
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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