Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0339
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             30   0.027
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   7.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   7.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   7.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   7.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 29.9 bits (64), Expect = 0.027
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 238 VGVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKT 372
           VGVQP Q+ ++ A+ P+D  AK P       +S    Q++  R T
Sbjct: 497 VGVQPHQDSATPADQPLDLSAK-PKNSQDNNISLLEQQKIPLRMT 540


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 406 IPGEQDVKEVVQSSDERVANSQTQLNFSMVNVGANY 513
           +PG  D   +V    E  A   T ++  +  V  NY
Sbjct: 343 VPGNHDQLRLVSRFGEEKARMITTMSLLLPGVAVNY 378


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 132 EVALVEGLQQVVEGA 88
           ++ LVEGL++  EGA
Sbjct: 236 QIKLVEGLEEEAEGA 250


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 406 IPGEQDVKEVVQSSDERVANSQTQLNFSMVNVGANY 513
           +PG  D   +V    E  A   T ++  +  V  NY
Sbjct: 343 VPGNHDQLRLVSRFGEEKARMITTMSLLLPGVAVNY 378


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 132 EVALVEGLQQVVEGA 88
           ++ LVEGL++  EGA
Sbjct: 326 QIKLVEGLEEEAEGA 340


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.129    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,658
Number of Sequences: 438
Number of extensions: 2922
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)