Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0339
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19130.2 68418.m02277 GPI transamidase component family prote... 54 8e-08
At5g19130.1 68418.m02276 GPI transamidase component family prote... 54 8e-08
At1g16630.1 68414.m01992 expressed protein 33 0.20
At5g53800.1 68418.m06685 expressed protein 33 0.27
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 31 0.62
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 31 0.82
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 31 0.82
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 31 1.1
At5g45820.1 68418.m05635 CBL-interacting protein kinase 20 (CIPK... 30 1.4
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.4
At4g13040.1 68417.m02035 AP2 domain-containing transcription fac... 30 1.9
At1g50620.1 68414.m05688 PHD finger family protein contains Pfam... 30 1.9
At5g64910.1 68418.m08165 expressed protein ; expression support... 29 2.5
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 29 2.5
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 29 2.5
At5g58000.1 68418.m07256 phosphatase-related weak similarity to ... 29 3.3
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 4.4
At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD, chlor... 29 4.4
At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1... 28 5.8
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 28 5.8
At1g03780.2 68414.m00358 targeting protein-related similar to mi... 28 5.8
At1g03780.1 68414.m00359 targeting protein-related similar to mi... 28 5.8
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 28 7.6
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 28 7.6
>At5g19130.2 68418.m02277 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 696
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +1
Query: 52 FHRLGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYM 183
F R LE +RS+NNLLE FHQS+F YML + +F+S+G YM
Sbjct: 411 FLRGARLLEGTIRSVNNLLEKFHQSFFLYMLTSPSKFISVGVYM 454
>At5g19130.1 68418.m02276 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 699
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +1
Query: 52 FHRLGLALETVLRSLNNLLEAFHQSYFFYMLPATDRFVSIGQYM 183
F R LE +RS+NNLLE FHQS+F YML + +F+S+G YM
Sbjct: 414 FLRGARLLEGTIRSVNNLLEKFHQSFFLYMLTSPSKFISVGVYM 457
>At1g16630.1 68414.m01992 expressed protein
Length = 845
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -1
Query: 147 GQHVEEVALVEGLQQVVEGAEDGLER-EA--EAVEVSGGERVHA 25
GQ EEVA EG+ V E +DG ER EA E ++V G ER+ A
Sbjct: 276 GQQEEEVASQEGVVAVEEQEDDGEERLEAAEEILDVDGEERLEA 319
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 301 KEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSDER 456
K+ G+R +R S S +R R+ SDSESE E E +S DER
Sbjct: 82 KDRGKRKSDRKSSRSRRR---RRDYSSSSSDSESESESEYSDSEESESEDER 130
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 234 QRQRAEQHGRAHQAQAGHVLADGHKPIG-GGQHVEEVALVEGLQQVVEGAEDGLEREAEA 58
++QRA+Q R + Q L G G G+H+ V ++ GL++VVEG L + ++
Sbjct: 216 EKQRAQQLSRIFEEQDN--LNQGENEDGEDGEHLSGVKVLHGLEKVVEGGAVILTLKDQS 273
Query: 57 VEVSG 43
V G
Sbjct: 274 VLTDG 278
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 31.1 bits (67), Expect = 0.82
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +1
Query: 289 DSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSDERVANS 468
DSE G + E E + + RK + + D + E E++VKEV SDE
Sbjct: 96 DSENSAEGNQVNESSGEKT-EAGEERKESDDNNGDGDGE--KEKNVKEVGSESDETTQKE 152
Query: 469 QTQLNFS 489
+TQL S
Sbjct: 153 KTQLEES 159
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 31.1 bits (67), Expect = 0.82
Identities = 25/99 (25%), Positives = 42/99 (42%)
Frame = +1
Query: 301 KEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQSSDERVANSQTQL 480
KE E+P +S ++ + +KT K S S+ E D+ E+ SS+ R +
Sbjct: 512 KELAEKPEPPMSNANTENQSKKKTRKRSRSSSQK----EPDMVEIKDSSNVRKLKEEFLR 567
Query: 481 NFSMVNVGANYLLVHVLGYAAMNSPVLFTQLGAKYFSLP 597
+F + ++ H YAA SP + K+ P
Sbjct: 568 DFKRFDTVEDFSDHH---YAAEGSPAKLSLWHLKFKGRP 603
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 250 PTQERSSQAEDPVDSEAKEPG--ERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD 423
PT+E + ++ + +EP E+ PE + E ++ K +EK + E E E++
Sbjct: 53 PTKETAPATKETAPTRTEEPSLTEQDPENVEEEESEE--EEKEEEEKEEEEEEEGEEEEE 110
Query: 424 VKEVVQSSDE 453
+E + +E
Sbjct: 111 EEEEEEEKEE 120
>At5g45820.1 68418.m05635 CBL-interacting protein kinase 20 (CIPK20)
identical to CBL-interacting protein kinase 20
[Arabidopsis thaliana] gi|14486384|gb|AAK61493
Length = 439
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 379 EKHSDSESEIPGEQDVKEVVQSSDERVANSQTQLNFSMVNVG 504
EK SES+ ++D KE+V S E +A S + N + +VG
Sbjct: 322 EKEERSESKFTTKKDAKEIV-SKFEEIATSSERFNLTKSDVG 362
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDV 426
QP S + +D V E K E+ + E+S RV + KT+ E S E
Sbjct: 358 QPNFNESVKKDDEVKYELKSDSEKVGDE--EASRDRVESSKTVTETRLVSGVEATSYVQS 415
Query: 427 KEVVQSSDERVANSQTQ 477
+ V+ + + +QT+
Sbjct: 416 RSVIDPNVSSASQNQTE 432
>At4g13040.1 68417.m02035 AP2 domain-containing transcription factor
family protein contains Pfam profile PF00847: AP2 domain
Length = 226
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 283 PVDSEAKEPGERPPERLSESSNQRVHNRK 369
PV+S++ P +PP+R + +RVHN++
Sbjct: 85 PVNSDSISPKYQPPKRRKQHRRKRVHNQE 113
>At1g50620.1 68414.m05688 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 629
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +1
Query: 250 PTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVK 429
PT ++++DP + + PPE + ++ +++ D S+I E ++
Sbjct: 509 PTGNDDAESDDPSEPVSHSETLNPPELEKKEVMRKDATERSVSADCQDKNSKIIAESSLQ 568
Query: 430 EVVQSSDERVANSQTQ 477
E + +S + NS TQ
Sbjct: 569 EEISAS--QTENSPTQ 582
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 247 QPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVH--NRKTIKEKHSDSESEIPGEQ 420
QPTQE + ED V+S A E + E +E+ + K +E ++ E++ E+
Sbjct: 44 QPTQET-EETEDKVESPAPEEEGKNEEEANENQEEEAAKVESKAAEEGGNEEEAKEDKEE 102
Query: 421 DVKEVVQSSDE 453
+ +E + E
Sbjct: 103 EKEEAAREDKE 113
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEV 435
Q++ + + D E +E E+ + + S + RK K+KH D + + G++ K +
Sbjct: 12 QDKYKEKKHKKDKEKREGKEK---KSKDRSKDKQKERKEKKDKHKDQKDKEKGKEKGKPL 68
Query: 436 VQSSDERVANS 468
+ E + N+
Sbjct: 69 EEKKAELLTNA 79
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/63 (20%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 256 QERSSQAEDPVDSEAKEPGERPPERLS-----ESSNQRVHNRKTIKEKHSDSESEIPGEQ 420
+++ +A+D +++ +EP ++ + E++ + K K KH + E+E+P ++
Sbjct: 460 KKKKKKADDEEEAKTEEPSKKKSNKKKTEAEPETAEEPAKKEKKKKRKHEEEETEMPAKK 519
Query: 421 DVK 429
K
Sbjct: 520 KEK 522
>At5g58000.1 68418.m07256 phosphatase-related weak similarity to CTD
phosphatase-like 3 [Arabidopsis thaliana] GI:22212705;
contains Pfam profiles PF02453: Reticulon, PF00533:
BRCA1 C Terminus (BRCT) domain, PF03031: NLI interacting
factor
Length = 1011
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +1
Query: 265 SSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVVQS 444
+ QA+D D +E E E++S +S+ VH+ + + + ++E+ D
Sbjct: 550 TDQADDDEDDNEEEEAEEEKEQMSVASDSPVHSSSSSDDLAAFLDAELDSASDASSGPSE 609
Query: 445 SDE 453
+E
Sbjct: 610 EEE 612
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/79 (24%), Positives = 28/79 (35%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQD 423
V P SS+ E P E P +PP+ S + + + K+K S E
Sbjct: 412 VMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKESPKPQPSKPEDS 471
Query: 424 VKEVVQSSDERVANSQTQL 480
K +E Q Q+
Sbjct: 472 PKPEQPKPEESPKPEQPQI 490
>At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD,
chloroplast, putative / Mg-protoporphyrin IX chelatase,
putative (CHLD) similar to Mg-chelatase SP|O24133 from
Nicotiana tabacum, GB:AF014399 GI:2318116 from [Pisum
sativum]
Length = 760
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 262 RSSQAEDPVDSEAKEPGERPPERLSES-SNQRVHNRKTIKEKHSDSESEIPGEQD 423
RSS E P + + + P PP + SES + ++ +E S+ E+E +QD
Sbjct: 397 RSSLDETPPEQQNQPPPPPPPPQNSESGEEENEEEQEEEEEDESNEENENEQQQD 451
>At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1
family protein similar to 13S condensin XCAP-D2 subunit
[Xenopus laevis] GI:3764087; contains Pfam profile
PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1
Length = 1439
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 238 VGVQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESE 405
+ + +E+S E+P DSE E P ++N R N+KT + +SES+
Sbjct: 1371 IETESEEEQSDSEEEPSDSE-----EEPDSAQCGTTNPRSLNQKTSGGEEGESESK 1421
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 292 SEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEI 408
S+ KE ER + L E +V + ++ +HSD ESE+
Sbjct: 184 SQEKELTERHAKWLDEELTAKVDSYAELRRRHSDLESEM 222
>At1g03780.2 68414.m00358 targeting protein-related similar to
microtubule-associated protein / targeting protein for
Xklp2 ((TPX2) GI:8926138) {Homo sapiens}; similar to
Restricted expression proliferation associated protein
100 (p100) (Differentially expressed in lung cells 2)
(DIL-2) (Targeting protein for Xklp2) (C20orf1 protein)
(C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo
sapiens}
Length = 725
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +2
Query: 257 RNAAVKLKTP*TRRPKNQESDRLNDYQKAQTSECTTGRRSKKNIVILNLRYQENRMLKK 433
R A LK P T RPKNQ S +QK+ G + NI QEN+ +K+
Sbjct: 180 RKIASLLKNPSTLRPKNQ-SQAKGSHQKS-----VKGETNLNNIASTTNLIQENQAIKR 232
>At1g03780.1 68414.m00359 targeting protein-related similar to
microtubule-associated protein / targeting protein for
Xklp2 ((TPX2) GI:8926138) {Homo sapiens}; similar to
Restricted expression proliferation associated protein
100 (p100) (Differentially expressed in lung cells 2)
(DIL-2) (Targeting protein for Xklp2) (C20orf1 protein)
(C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo
sapiens}
Length = 687
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +2
Query: 257 RNAAVKLKTP*TRRPKNQESDRLNDYQKAQTSECTTGRRSKKNIVILNLRYQENRMLKK 433
R A LK P T RPKNQ S +QK+ G + NI QEN+ +K+
Sbjct: 180 RKIASLLKNPSTLRPKNQ-SQAKGSHQKS-----VKGETNLNNIASTTNLIQENQAIKR 232
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Frame = +1
Query: 244 VQPTQERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSES------- 402
V+ ++ + + +D+ A+E + +R+ + SN+ +KTI+E S+SE
Sbjct: 406 VKSADQQVADMKQSLDN-AEEEKKMLSQRILDISNEIQEAQKTIQEHMSESEQLKESHGV 464
Query: 403 ---EIPGEQDVKEVVQ-SSDERVANSQTQL 480
E+ G +D+ E Q S R++ +TQL
Sbjct: 465 KERELTGLRDIHETHQRESSTRLSELETQL 494
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/75 (24%), Positives = 30/75 (40%)
Frame = +1
Query: 259 ERSSQAEDPVDSEAKEPGERPPERLSESSNQRVHNRKTIKEKHSDSESEIPGEQDVKEVV 438
ER + E E KE E P +R E S+ + +++ E S E ++KE
Sbjct: 335 ERKKKEESSSQGEGKE--EEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKETE 392
Query: 439 QSSDERVANSQTQLN 483
E ++ + N
Sbjct: 393 IKEKEESSSQEGNEN 407
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.129 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,483,910
Number of Sequences: 28952
Number of extensions: 223575
Number of successful extensions: 702
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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