Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0337
(632 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 275 5e-73
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 227 1e-58
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 202 4e-51
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 188 1e-46
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 175 7e-43
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 173 3e-42
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 163 4e-39
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 160 3e-38
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 157 2e-37
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 145 7e-34
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 141 1e-32
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 138 1e-31
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 124 2e-27
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 123 4e-27
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 121 2e-26
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 116 5e-25
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 115 8e-25
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 104 2e-21
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 103 5e-21
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 103 5e-21
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 102 6e-21
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 100 3e-20
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 100 6e-20
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 96 5e-19
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 95 2e-18
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 94 2e-18
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 94 3e-18
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 93 5e-18
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 91 3e-17
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 88 1e-16
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 84 2e-15
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 81 2e-14
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 72 1e-11
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 63 5e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 8e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 45 0.001
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 40 0.066
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 39 0.087
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 39 0.11
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 36 0.61
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 36 0.81
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 35 1.4
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 35 1.9
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 33 4.3
UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 33 4.3
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 7.5
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 33 7.5
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 33 7.5
UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia bellii|... 32 10.0
UniRef50_A7SQJ3 Cluster: Predicted protein; n=1; Nematostella ve... 32 10.0
UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 32 10.0
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 32 10.0
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 275 bits (675), Expect = 5e-73
Identities = 131/160 (81%), Positives = 144/160 (90%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 276
+ G LKR+FKHLA+D+ M + R LKVEKWFG+KKELAAVRTVCSH+ENMIKGVT GF
Sbjct: 27 ITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGF 86
Query: 277 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 456
QYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDELI+EG
Sbjct: 87 QYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEG 146
Query: 457 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 576
N +E VS SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV
Sbjct: 147 NDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
Score = 37.1 bits (82), Expect = 0.35
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKELQTL 140
M+ I +NQ VKIP + VK+R+VT+ G RG+ ++ + L
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHL 41
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 227 bits (556), Expect = 1e-58
Identities = 107/161 (66%), Positives = 133/161 (82%), Gaps = 2/161 (1%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 270
+KGP L+R+F H+ V++ ++ + L+V+KW+G++KELA VRT+CSHV+NMIKGVT
Sbjct: 27 VKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTL 86
Query: 271 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 450
GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S QKDELI+
Sbjct: 87 GFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELIL 146
Query: 451 EGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 573
EGN +E VS+SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 147 EGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKE 128
MK I++NQ V IP+ + + +K R V VKGPRG+ +++
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRD 37
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 202 bits (494), Expect = 4e-51
Identities = 95/163 (58%), Positives = 124/163 (76%), Gaps = 1/163 (0%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
++GP L RNFKHL +D +++ R L+V+ WFG+++ +AA+RT SHV+N+I GVTKG
Sbjct: 27 VEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKG 86
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 453
++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K KDEL+++
Sbjct: 87 YRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLD 146
Query: 454 GNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 582
GN +E VS SAALI Q VKNKDIRKFLDG+YVS+K T+ D
Sbjct: 147 GNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKELQTL 140
MK I+A++ ++IP+G+TV V +++VTV+GPRG + + L
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHL 41
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 188 bits (458), Expect = 1e-46
Identities = 80/160 (50%), Positives = 117/160 (73%)
Frame = +1
Query: 94 QLKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
++ GP L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +ENMI GVTKG
Sbjct: 44 KVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKG 103
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 453
++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K KDE+++
Sbjct: 104 YEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLT 163
Query: 454 GNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 573
GNSLE +S S A IQ + +K KD+RKFLDG+YVSE+ +
Sbjct: 164 GNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 175 bits (426), Expect = 7e-43
Identities = 85/157 (54%), Positives = 112/157 (71%)
Frame = +1
Query: 103 GPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 282
GP LK+N +H+ ++++ +K W GS+K A +R+V S + NMI GVT+GF+Y
Sbjct: 30 GPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGSRKHNACIRSVYSIINNMIIGVTQGFRY 88
Query: 283 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 462
KMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KDE+I+EGNS
Sbjct: 89 KMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNS 148
Query: 463 LEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 573
LE+VS SAA I+Q V+NKDIRKFLDG+YVSE+ +
Sbjct: 149 LENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
Score = 37.9 bits (84), Expect = 0.20
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 21 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKELQ 134
+ I ++ + IP G+TV +K+R VTV GPRG+ ++ L+
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLR 40
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 173 bits (421), Expect = 3e-42
Identities = 88/162 (54%), Positives = 112/162 (69%), Gaps = 2/162 (1%)
Frame = +1
Query: 103 GPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 282
GP L +N KH+ V VN +L+KV G +K +AA+RTV S V+NMI GVTKG++Y
Sbjct: 29 GPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKY 88
Query: 283 KMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 456
KMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S KDE+++ G
Sbjct: 89 KMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSG 148
Query: 457 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 582
NS+EDVS +AA +QQ V+NKDIRKFLDG+YVS K + D
Sbjct: 149 NSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKELQ 134
MK I Q++++P+G+TV +KSR+V V GPRG+ K L+
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLK 39
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 163 bits (395), Expect = 4e-39
Identities = 80/156 (51%), Positives = 99/156 (63%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 276
+KG L R+F H +DI N + V WF K A RT+CSH+ENM KGVT GF
Sbjct: 26 VKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKRNALPRTICSHIENMFKGVTYGF 84
Query: 277 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 456
+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S KDELI+ G
Sbjct: 85 EYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVKDELILRG 144
Query: 457 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
S+EDVS +AA I +S V NKD+RKFLDG YVS +
Sbjct: 145 ISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 160 bits (388), Expect = 3e-38
Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 3/157 (1%)
Frame = +1
Query: 115 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 285
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 286 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 465
MRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 466 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 576
+ VS SAAL+ +T V+NKDIRKFLDG+Y + K TVV
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
Score = 34.7 bits (76), Expect = 1.9
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQK 125
M QI + +P ++V V SR+ TVKGPRGS K
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTK 36
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 157 bits (382), Expect = 2e-37
Identities = 81/177 (45%), Positives = 114/177 (64%), Gaps = 9/177 (5%)
Frame = +1
Query: 79 NRVW*QLKGPAXVLKRNFKHLAVDI-------RMVNPR--LLKVEKWFGSKKELAAVRTV 231
NR ++ GP L R F+H VDI + P+ ++ ++ W+G++++ A VRT+
Sbjct: 22 NRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNRRDSAVVRTI 81
Query: 232 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 411
SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK R ++M GV
Sbjct: 82 ASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVV 141
Query: 412 VVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 582
V KDE+ +EGN +E VS SAA I + V+NKDIR+FLDG+YVSEK + D
Sbjct: 142 V--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLIEND 196
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 145 bits (352), Expect = 7e-34
Identities = 76/167 (45%), Positives = 107/167 (64%), Gaps = 10/167 (5%)
Frame = +1
Query: 94 QLKGPAXVLKRNFKHLAVDIRM---VNPR------LLKVEKWFGSKKELAAVRTVCSHVE 246
++KGP L +NF+H A+DI++ VN + + V W +K+ V +V S +
Sbjct: 26 KVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSVRMWQSYRKQRCQVNSVASQIR 85
Query: 247 NMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV-NS 423
NMI+GVT G+++KM YAHFPI +EI+NFLGEK IR +K PGVT+ N
Sbjct: 86 NMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVTITRNE 145
Query: 424 PKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
++K+ L ++GN L +VS + ALI Q+ VKNKDIR+FLDG+YVSEK
Sbjct: 146 AEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
Score = 36.3 bits (80), Expect = 0.61
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKELQ 134
MK I+ + V IP+ + + KS++V VKGPRG K +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFR 39
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 141 bits (341), Expect = 1e-32
Identities = 68/148 (45%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Frame = +1
Query: 124 RNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVY 300
R+F+ + IR + + + W KK+LA + T+ SH+ NMI GV+ GF+Y ++ +Y
Sbjct: 36 RSFEKTQISIRYFEKKKEIILLLWMAGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIY 95
Query: 301 AHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSS 480
AHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KDE+ + G+ L VS
Sbjct: 96 AHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSL 155
Query: 481 SAALIQQSTTVKNKDIRKFLDGLYVSEK 564
+AA IQQS KNKD+RKFLDG+Y+ K
Sbjct: 156 NAASIQQSCQAKNKDLRKFLDGIYIIMK 183
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 138 bits (334), Expect = 1e-31
Identities = 62/106 (58%), Positives = 80/106 (75%)
Frame = +1
Query: 79 NRVW*QLKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIK 258
NRV + GP LKR+F+HL +++ V L+V KWFG +KE+AA+RTVCSH++NMIK
Sbjct: 22 NRVV-HVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIK 80
Query: 259 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 396
GVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 81 GVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKELQTL 140
MK + +N V PDG+T VK+R+V V GPRG+ +++ + L
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHL 41
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 124 bits (298), Expect = 2e-27
Identities = 68/123 (55%), Positives = 85/123 (69%)
Frame = +1
Query: 205 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 384
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 385 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
+M GV S QKDELI+EGN E VS+SAALIQ++T V+N+DIRKF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 565 TTV 573
T+
Sbjct: 128 GTM 130
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 123 bits (296), Expect = 4e-27
Identities = 67/157 (42%), Positives = 101/157 (64%)
Frame = +1
Query: 94 QLKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
++KGP L+R K+ V I + +++ + K F KK++A VRT +H+ NMIKGVT+G
Sbjct: 27 KVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAIVRTFKAHINNMIKGVTEG 85
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 453
F+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV + E+ +E
Sbjct: 86 FKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV---KVKGSEIEVE 140
Query: 454 GNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
G E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 141 GIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
Score = 36.7 bits (81), Expect = 0.46
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 39 QKVKIPDGLTVHVKSRLVTVKGPRGSSQKELQTLG 143
++++IP+G+ V V+ V VKGP+G Q+EL+ G
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPG 43
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 121 bits (291), Expect = 2e-26
Identities = 67/157 (42%), Positives = 99/157 (63%)
Frame = +1
Query: 94 QLKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
++KGP L+R F + I + ++ + K F +K++A RT +H+ NMIKGVT+G
Sbjct: 27 KVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAIARTFAAHIRNMIKGVTEG 85
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 453
F YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV + E+I+E
Sbjct: 86 FTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRGQEIIVE 140
Query: 454 GNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
G E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 141 GIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
Score = 32.3 bits (70), Expect = 10.0
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +3
Query: 39 QKVKIPDGLTVHVKSRLVTVKGPRGSSQKE 128
++V+IP+G+ V V+ V VKGP+G ++E
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELERE 38
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 116 bits (279), Expect = 5e-25
Identities = 58/130 (44%), Positives = 80/130 (61%)
Frame = +1
Query: 175 LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEI 354
+++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ +
Sbjct: 72 IRIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLV 131
Query: 355 RNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 534
+NFLGEK ++R +M G V ++KD ++IEG SL DVS SA I KN+D R
Sbjct: 132 KNFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRV 190
Query: 535 FLDGLYVSEK 564
FLDG++V+E+
Sbjct: 191 FLDGIFVTER 200
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 115 bits (277), Expect = 8e-25
Identities = 62/148 (41%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Frame = +1
Query: 118 LKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRA 294
L ++ HL +D N + WFG++K LA + T+ V+NMI GVT G++YKM
Sbjct: 41 LVKDLSHLKLDFEYDENDHQIVARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHF 100
Query: 295 VYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPKQKDELIIEGNSLED 471
VY+HFPI +E + F+G K + V GV + N KDE+ IEG +LED
Sbjct: 101 VYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAKDEINIEGANLED 160
Query: 472 VSSSAALIQQSTTVKNKDIRKFLDGLYV 555
VS I Q T +K+KD+RKFLDG+YV
Sbjct: 161 VSLVCGQIHQLTKIKDKDLRKFLDGIYV 188
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 104 bits (249), Expect = 2e-21
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
+ G L+R F+H+ VD+++V R + VE WFG K A +RTVCSH+ENMI GV +
Sbjct: 89 VSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNKACIRTVCSHIENMITGVRQR 148
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 366
+QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 149 YQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 103 bits (246), Expect = 5e-21
Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
+KG ++F+ + V IR+ + LK E K++LA + T S V N+ +GV G
Sbjct: 12 VKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEGVGVG 69
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 453
+ K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + +++I+
Sbjct: 70 YTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGEDVIVT 124
Query: 454 GNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
G+ L DVS +AA ++Q T VKNKD R FLDG+YV EK
Sbjct: 125 GHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 103 bits (246), Expect = 5e-21
Identities = 59/154 (38%), Positives = 89/154 (57%)
Frame = +1
Query: 103 GPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 282
GP R K+ V I + + ++ +V KK A V T H+EN+I GV +GF+Y
Sbjct: 48 GPKGENTRYLKYRGVFIEVGDGKV-RVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEY 106
Query: 283 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 462
++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S + ++ + G
Sbjct: 107 HLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGID 161
Query: 463 LEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
+E+ +AA ++Q+T +K KD R F DG+Y+ +K
Sbjct: 162 IEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 102 bits (245), Expect = 6e-21
Identities = 60/156 (38%), Positives = 91/156 (58%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 276
+ GP L R+ + +D+ MV + V K+ LA T+ +H +NMI+GV G+
Sbjct: 24 VSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAMTGTLEAHAKNMIRGVADGY 82
Query: 277 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 456
+Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV DE+ I G
Sbjct: 83 EYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVKIG---NDEVTITG 137
Query: 457 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
E V ++AA I+ +T + +D R F DG+Y++E+
Sbjct: 138 IDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 100 bits (239), Expect = 3e-20
Identities = 52/164 (31%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = +1
Query: 94 QLKGPAXVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 270
++KGP + ++F + A IR+ +N + +E F +++ A + ++ +H++NMI G
Sbjct: 29 KVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKALLYSIIAHIKNMITGTIN 87
Query: 271 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 450
G++Y ++ + HFPI+ V G+ +++ N +GEK IRR K+ PGV V + +++++
Sbjct: 88 GYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEKNIRRAKILPGVKVT---VKGEDIVV 142
Query: 451 EGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 582
EG+ + +V+ +AA I+ ST + D R F DG+Y+ +K + L+
Sbjct: 143 EGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIGLE 186
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 99.5 bits (237), Expect = 6e-20
Identities = 60/155 (38%), Positives = 92/155 (59%)
Frame = +1
Query: 100 KGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQ 279
KGP ++R F + + I + ++ V+ K++ A V T SH++N+I GV++GF+
Sbjct: 27 KGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVGTFASHLKNLIIGVSEGFE 85
Query: 280 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 459
KM VYAHFP+ V EG +++ I NFLGEK R K+ G T V +E+++ G
Sbjct: 86 CKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETKVK--VSGNEIVVSGI 140
Query: 460 SLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
+ EDV +AA I+Q T +K D R F DG+Y+ +K
Sbjct: 141 NKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 96.3 bits (229), Expect = 5e-19
Identities = 50/148 (33%), Positives = 82/148 (55%)
Frame = +1
Query: 121 KRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVY 300
K N K++ + + + L V ++ +K A VRT+ S + NMI GV+KGF Y ++ VY
Sbjct: 37 KFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVY 96
Query: 301 AHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSS 480
+HFPI+ + + +EI N G K I + V V + K E+I+ +E +
Sbjct: 97 SHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGI 156
Query: 481 SAALIQQSTTVKNKDIRKFLDGLYVSEK 564
++LIQ ++ NKD R F+DG+Y++ K
Sbjct: 157 LSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 94.7 bits (225), Expect = 2e-18
Identities = 56/144 (38%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
Frame = +1
Query: 94 QLKGPAXVLKRNFKHLA-VDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 270
+++GP ++++F H + IR V + VE + +KK+ A V T+ S + NMI GVTK
Sbjct: 26 EVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYALVGTIASIINNMIIGVTK 84
Query: 271 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 450
G++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD++I+
Sbjct: 85 GYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKDDVIV 139
Query: 451 EGNSLEDVSSSAALIQQSTTVKNK 522
EG L+ V+ +AA I +T ++ K
Sbjct: 140 EGIDLDAVAQTAANIHLATHLRGK 163
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKE 128
M+ + + V IP+G+ VHV + V V+GP G +K+
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKD 37
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 94.3 bits (224), Expect = 2e-18
Identities = 55/155 (35%), Positives = 91/155 (58%)
Frame = +1
Query: 100 KGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQ 279
+GP +NF+++ V I + + ++ ++ K++ A + T S + N+ +G+ +G+
Sbjct: 31 EGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAILHTARSIIRNICEGLVEGYT 89
Query: 280 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 459
KM+ V+AHFPI V EG I+ I NF GE+ R + V+ PK +D +++ G
Sbjct: 90 IKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGED-VLLTGE 144
Query: 460 SLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
D++ +AA I+ +T VKNKD R FLDG+YV EK
Sbjct: 145 VWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 93.9 bits (223), Expect = 3e-18
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 5/162 (3%)
Frame = +1
Query: 94 QLKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
++ GP ++R F H + + VN + +E +F +++E + T SH++NM++GV
Sbjct: 26 KVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFATRREKRLINTWRSHIKNMLEGVQNP 84
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVKMAPGVTV-VNSPKQKDEL 444
F Y+++ Y HFP+ V EGN +I + NFLGEK I+ + V V + K + E+
Sbjct: 85 FVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKVKVKIEQNKDETEI 142
Query: 445 IIEGNSLEDVSSSAALIQQSTTV--KNKDIRKFLDGLYVSEK 564
++E E A++I+QST K KD R+F DG+++ K
Sbjct: 143 VVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWLYYK 184
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 93.1 bits (221), Expect = 5e-18
Identities = 50/120 (41%), Positives = 74/120 (61%)
Frame = +1
Query: 205 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 384
K ++ + T SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK R
Sbjct: 58 KTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPR 115
Query: 385 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
R + G T V +EL + G +E V +AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 116 RTTI-HGDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 90.6 bits (215), Expect = 3e-17
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Frame = +1
Query: 118 LKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 297
L R F+H +++R + L +V KKE A T +H+ NM +GV GF+YK++AV
Sbjct: 35 LTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALAGTWAAHLTNMARGVDSGFEYKLKAV 93
Query: 298 YAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP--GVTVVNSPKQKDELIIEGNSLED 471
Y+HFP+ + GN + + N GEK + RV P V + K ++ + G E
Sbjct: 94 YSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEVEVKVQNKTDVTVSGADREK 150
Query: 472 VSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
V +AA I++S +KN+D R F DG+Y+ K
Sbjct: 151 VGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 88.2 bits (209), Expect = 1e-16
Identities = 49/136 (36%), Positives = 81/136 (59%)
Frame = +1
Query: 157 MVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEG 336
+V +K+ K + +E V T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G
Sbjct: 46 LVEDNKIKIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKG 104
Query: 337 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVK 516
+++ I NF GE+ R ++ G T V+ + D L + G S +DV +AA I+++T +K
Sbjct: 105 KTVV-IENFFGERSPRTAEIV-GETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIK 160
Query: 517 NKDIRKFLDGLYVSEK 564
D R F DG+Y+ K
Sbjct: 161 GFDPRVFQDGIYLISK 176
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 84.2 bits (199), Expect = 2e-15
Identities = 48/157 (30%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 276
+KGP + + F + V + + + ++ + ++++ A + + +++ENM KGVT+G
Sbjct: 45 VKGPKGEVTKEFYYPDVYLWVEDDEVV-IAATRSNRRQKAILGMIKAYIENMQKGVTEGH 103
Query: 277 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQKDELIIE 453
+YK++ VY+HFP + + I NF+GE R ++ P T V Q ++I+
Sbjct: 104 EYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQDIIVR 161
Query: 454 GNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 564
G E V +AA ++Q+T +K++D R F DG+Y+ EK
Sbjct: 162 GIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 81.4 bits (192), Expect = 2e-14
Identities = 47/138 (34%), Positives = 83/138 (60%)
Frame = +1
Query: 94 QLKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
++KGP + + FK+ V + + + +++ +E + K+E A + T ++NM GVT+G
Sbjct: 31 KVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARKREYAILGTYKGILKNMFLGVTRG 89
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 453
++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K++++IE
Sbjct: 90 WRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKEDIVIE 145
Query: 454 GNSLEDVSSSAALIQQST 507
G E VS+ AA +Q +T
Sbjct: 146 GIDRELVSTFAAAVQAAT 163
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 71.7 bits (168), Expect = 1e-11
Identities = 42/127 (33%), Positives = 70/127 (55%)
Frame = +1
Query: 175 LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEI 354
+K+ +K V T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I +
Sbjct: 52 VKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-V 109
Query: 355 RNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 534
NFLGEK R K+ G V + D + I G + +AA I+++T +++ D R
Sbjct: 110 ENFLGEKSPRSAKIVDGCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFDARV 166
Query: 535 FLDGLYV 555
F DG+++
Sbjct: 167 FQDGIFL 173
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 64.1 bits (149), Expect = 3e-09
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = -3
Query: 576 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRC 397
+N R I TIQE +DIL+ D + LLN SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 396 HLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 247
S+ F TQE++ N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRLLK--VEKWFGSKKELAAVRTVCSHVENMIKGVTK 270
+KGP L R+F H+ V++ ++ +L K V+KW+G++KELA V T+CS V+N IK VT
Sbjct: 27 VKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNRKELATVHTICSPVQNTIKWVTL 86
Query: 271 G 273
G
Sbjct: 87 G 87
Score = 38.3 bits (85), Expect = 0.15
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKE 128
MK I++NQ V IP + + +K R V VKGP+GS ++
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRD 37
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +1
Query: 235 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 414
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 415 VNSPKQKDELI 447
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHVENMIKGV 264
+K L+R+F H+ +++R++ R L+V+KW + K LA T+ SHV+NMIK V
Sbjct: 21 VKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 39.5 bits (88), Expect = 0.066
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 403 GVTVVNSP-KQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIR 531
GV + ++K+ LI+ N L +VS + ALI Q+ VKNKDIR
Sbjct: 124 GVVITRKEAEEKNVLILSANDLNNVSLTCALIHQACAVKNKDIR 167
Score = 37.9 bits (84), Expect = 0.20
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Frame = +1
Query: 103 GPAXVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCSHVENMI 255
GP +L RNFKH ++DI++ L+K+E K+ V+++ + ++NMI
Sbjct: 59 GPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAAQIKNMI 118
Query: 256 KGVTKG 273
+G+T G
Sbjct: 119 RGITSG 124
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 39.1 bits (87), Expect = 0.087
Identities = 35/134 (26%), Positives = 63/134 (47%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 276
+KGP L R F H ++I+ V +L V + K+ A T S + NM++GV+KGF
Sbjct: 27 VKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGF 84
Query: 277 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 456
+ + V + + GN ++ L Y V++ P + + +++++G
Sbjct: 85 ERGLELVGVGYR---ASKSGNKLV-----LNVGYSHPVEIVPEEGIEIEVPSQTKVVVKG 136
Query: 457 NSLEDVSSSAALIQ 498
E V + AA I+
Sbjct: 137 TDKERVGAIAANIR 150
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 38.7 bits (86), Expect = 0.11
Identities = 14/38 (36%), Positives = 29/38 (76%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKEL 131
MK+++ +KV+IP+G +V + R++TV+G R ++ ++L
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDL 38
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 36.3 bits (80), Expect = 0.61
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Frame = +1
Query: 94 QLKGPAXVLKRNF-KHLAVDIRMVNPRLLK----VEKWFGSKKELAAVR-TVCSHVENMI 255
++KG L N ++L VD R N ++K V K +K L A+R T SHV NMI
Sbjct: 27 KIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRSSDEKRLKALRGTFTSHVRNMI 85
Query: 256 KGVTKGFQYKM 288
KGVT+G++ ++
Sbjct: 86 KGVTEGYKKEL 96
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 35.9 bits (79), Expect = 0.81
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
+KGP L + + DI ++ N + V++ KK A + NMIKGV+ G
Sbjct: 34 IKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKKNRALHGLYRMLIYNMIKGVSNG 90
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 453
F+ K+ + F N + N I+ + +G + +K+ +T+ + ++I++
Sbjct: 91 FKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIMIKLPQSITLEVKMDKNPQIILK 147
Query: 454 GNSLEDVSSSAALIQ 498
+ + AA I+
Sbjct: 148 SYDKQLLGIVAAKIR 162
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 35.1 bits (77), Expect = 1.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKE 128
+A + + +P G+TV +K +V VKGP+G +E
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQE 36
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 34.7 bits (76), Expect = 1.9
Identities = 33/135 (24%), Positives = 65/135 (48%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 276
+KG L++ F + V+I + + ++ K K+E A T + + NM+KGVT+GF
Sbjct: 27 VKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMHGTTRAIIANMVKGVTEGF 84
Query: 277 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 456
+ + V + +G + I N +G + ++ PG+ ++ + + +I+ G
Sbjct: 85 EKALEIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEPGIEII--VEGNNRIIVRG 136
Query: 457 NSLEDVSSSAALIQQ 501
E V AA I++
Sbjct: 137 ADKERVGQVAANIRR 151
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.5 bits (73), Expect = 4.3
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 457 NSLEDVSSSAALIQQSTTVKNKDIRKFLDG 546
NS++ +SSSA+L+QQS K+ + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 113
Score = 33.5 bits (73), Expect = 4.3
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -3
Query: 576 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQR 460
+N+C LR IK + L+ +L + SRL N SR RD+F++
Sbjct: 25 NNNCKLRQIKPVPNLTRLL--EESRLTNSLSRLRDVFKK 61
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 33.5 bits (73), Expect = 4.3
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKEL 131
V + V+IP+G+ + + + VTVKGP+G +EL
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL 37
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 32.7 bits (71), Expect = 7.5
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +1
Query: 127 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAH 306
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 307 FPINCVTTEGNSIIE 351
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 409 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 534
TVV P + ++ G+S+ED + + +++TT KDI K
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDIIK 117
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 32.7 bits (71), Expect = 7.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGS 116
VA VK+P G+ V + +L++VKGP+G+
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGT 32
Score = 32.3 bits (70), Expect = 10.0
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 97 LKGPAXVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 273
+KGP L+ H +V++ +V L+ G ++ A T + V NM++GV++G
Sbjct: 26 VKGPKGTLELII-HSSVEVEIVEEAGELRFAARNGDQQTRAMAGTTRALVNNMVQGVSQG 84
Query: 274 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 453
F+ K++ V + T N LG + ++ G+T +P Q D ++I
Sbjct: 85 FERKLQLVGVGYKAQAKGTVLNLA------LGFSHPVDYELPNGIT-AETPSQTD-ILIR 136
Query: 454 GNSLEDVSSSAALIQ 498
G + V AA I+
Sbjct: 137 GIDKQLVGQVAAEIR 151
>UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia
bellii|Rep: Ankyrin repeat - Rickettsia bellii (strain
RML369-C)
Length = 629
Score = 32.3 bits (70), Expect = 10.0
Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 148 DIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI-NCV 324
D R L+K + KK++ A + CS ++N + + + K+R + +PI
Sbjct: 508 DRRKAVESLVKYDNDLNKKKDITATLSYCSAIDNSFRAIDRNNLSKLRVLLDVYPILQEK 567
Query: 325 TTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 414
+G++++ + Y+ + + G+ +
Sbjct: 568 NNKGDTLLTAAVYKDNYYLAKYLVIRGIKI 597
>UniRef50_A7SQJ3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 813
Score = 32.3 bits (70), Expect = 10.0
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 3 QTSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGSSQKELQTLGC 146
Q + +K++ + K K DG+ VH K+ TV+ PRG S ++ + C
Sbjct: 99 QNAKRIKKLEEDLKKKTCDGVLVHRKAVAATVEEPRGKSLRDGGSNSC 146
>UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 206
Score = 32.3 bits (70), Expect = 10.0
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +1
Query: 391 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTT 570
K A G +V + ++KDE++I+G+ LE+V + + +KN + + +D +K T
Sbjct: 134 KFATGCSVSKNAEKKDEIVIQGDVLEEVEKYIHSLLEEKGLKNVKL-EIIDSQKKKKKPT 192
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 32.3 bits (70), Expect = 10.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRG 113
+ N+ V IP G+TV + R + V+GP+G
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG 31
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 32.3 bits (70), Expect = 10.0
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 45 VKIPDGLTVHVKSRLVTVKGPRG 113
+ IP G+TV +K +VTVKGP+G
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKG 31
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,829,511
Number of Sequences: 1657284
Number of extensions: 11646432
Number of successful extensions: 29259
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 28435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29224
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -