Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0335
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   1.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   1.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   1.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 277 RSMSYLVLNVSRNCSSYLI 333
           +S   L  +V RNCS+Y+I
Sbjct: 206 KSTKVLFKDVDRNCSAYII 224


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 277 RSMSYLVLNVSRNCSSYLI 333
           +S   L  +V RNCS+Y+I
Sbjct: 206 KSTKVLFKDVDRNCSAYII 224


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 277 RSMSYLVLNVSRNCSSYLI 333
           +S   L  +V RNCS+Y+I
Sbjct: 206 KSTKVLFKDVDRNCSAYII 224


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 476 HSL*YVLVKEVLQPGPLRLH 417
           H    VLV ++LQPG   LH
Sbjct: 137 HPFQRVLVHDILQPGVKGLH 156


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -3

Query: 365 VHHHTNSAIGLIR*LEQFLDTFSTRYDIDLTHTVREHVSHSKTG*PCASSQDLLKSVGVD 186
           V ++   A+   +   QF+  F     +++     + V++  TG   A + +LLKSV  D
Sbjct: 138 VAYYEQYAVEFFQFYAQFIVYFLIYAVLEMLLQKYKTVTYVMTGQLKAQNSNLLKSVCAD 197

Query: 185 GC 180
            C
Sbjct: 198 LC 199


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = +3

Query: 429  WSWLKDFFYENILKTMSEQERTLLRLGPASSALTHKF 539
            W+ + + FY+ ++   S   + L+ LG  + +  +K+
Sbjct: 2373 WADIDNEFYKKVVSYKSRGVKVLIALGGWNDSAGNKY 2409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,977
Number of Sequences: 336
Number of extensions: 2646
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)