Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0335
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   0.99 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   3.0  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   4.0  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   9.2  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   9.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 353  YDGAPGREYPATGRFRR 403
            Y G PG+EY   G+++R
Sbjct: 1800 YQGLPGKEYTVLGKYKR 1816


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 59  QSLARDQINSSGEVHCIPESSG 124
           +S+  D   +SG+ HC+P ++G
Sbjct: 652 ESMDSDGGGASGDFHCLPSATG 673


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 526 SALLAGPRRSNVRSCSDIVFN 464
           S + AGP R+N +S SD V N
Sbjct: 222 SDISAGPCRTNTKSSSDPVLN 242


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 83  NSSGEVHCIPESSGVCSSTV*HRSQHAT 166
           +S   VH +PE  G  S    HR+Q  T
Sbjct: 39  HSRHHVHMMPEMHGAYSQVHHHRAQDPT 66


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 83  NSSGEVHCIPESSGVCSSTV*HRSQHAT 166
           +S   VH +PE  G  S    HR+Q  T
Sbjct: 39  HSRHHVHMMPEMHGAYSQVHHHRAQDPT 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,088
Number of Sequences: 2352
Number of extensions: 10607
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)