Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0332
(824 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.7
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 1.8
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 1.9
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 3.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.9
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.9
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 22 5.1
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 6.8
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 6.8
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 6.8
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -2
Query: 127 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 32
K PG S GD + + V H T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.0 bits (42), Expect(2) = 1.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 441 PTYQSQRFHPVRHRNYEDYGLHQ 509
P Q Q ++ H N E+Y HQ
Sbjct: 353 PNPQQQYYYNKNHPNSENYINHQ 375
Score = 20.6 bits (41), Expect(2) = 1.8
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = +3
Query: 618 QGLHGTHLRHEVEQRVHNRQGHEGVHFAAAREGHSP 725
QG G H + ++ G E H GH P
Sbjct: 379 QGYQGEHPNYNHYGYHYSGDGGEVAHLPNTHMGHEP 414
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.0 bits (42), Expect(2) = 1.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 441 PTYQSQRFHPVRHRNYEDYGLHQ 509
P Q Q ++ H N E+Y HQ
Sbjct: 301 PNPQQQYYYNKNHPNSENYINHQ 323
Score = 20.6 bits (41), Expect(2) = 1.9
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = +3
Query: 618 QGLHGTHLRHEVEQRVHNRQGHEGVHFAAAREGHSP 725
QG G H + ++ G E H GH P
Sbjct: 327 QGYQGEHPNYNHYGYHYSGDGGEVAHLPNTHMGHEP 362
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 74
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 536 IIHKFPDSNLMKSIIFVVAMSNWMESL 456
II +F L + VV +SNW E L
Sbjct: 239 IIARFNIERLCNGLKRVVKLSNWREPL 265
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -2
Query: 121 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 32
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -2
Query: 121 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 32
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.8
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = +1
Query: 322 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 486
H + P Y + +R+A P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,367
Number of Sequences: 336
Number of extensions: 4502
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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