Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0332
(824 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 373 e-103
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 372 e-103
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 372 e-103
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 33 0.21
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 1.1
12_02_1215 + 27070164-27070302,27070308-27071098 30 1.9
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 2.6
12_02_0735 - 22636835-22639502,22639755-22640734 29 3.4
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 4.5
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 4.5
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 5.9
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.9
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 28 7.8
04_04_0040 + 22322839-22324173 28 7.8
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 7.8
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 373 bits (917), Expect = e-103
Identities = 165/251 (65%), Positives = 205/251 (81%)
Frame = +1
Query: 1 LXKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 180
L KHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I
Sbjct: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISI 64
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 360
+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLC
Sbjct: 65 LMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLC 124
Query: 361 KVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMIT 540
KV+ V G K +PYL T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+ M+T
Sbjct: 125 KVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVT 184
Query: 541 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 720
GGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++SLP+GKGI
Sbjct: 185 GGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGI 244
Query: 721 RLTXAEERDKR 753
+L+ EE+ KR
Sbjct: 245 KLSIIEEQRKR 255
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 372 bits (914), Expect = e-103
Identities = 167/251 (66%), Positives = 203/251 (80%)
Frame = +1
Query: 1 LXKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 180
L KHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I
Sbjct: 21 LKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISI 80
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 360
+ QR + VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +H I E+AK+KLC
Sbjct: 81 LMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLC 140
Query: 361 KVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMIT 540
KV+ V G K +P+L T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+ M+T
Sbjct: 141 KVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVT 200
Query: 541 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 720
GGRN GRVG I SRE+H GSF+ +H++D+ GH FATR+ NVF IGK K ++SLP+GKGI
Sbjct: 201 GGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGI 260
Query: 721 RLTXAEERDKR 753
+L+ EE KR
Sbjct: 261 KLSIIEEARKR 271
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 372 bits (914), Expect = e-103
Identities = 164/251 (65%), Positives = 205/251 (81%)
Frame = +1
Query: 1 LXKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 180
L KHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I
Sbjct: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISI 64
Query: 181 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 360
+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLC
Sbjct: 65 LMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLC 124
Query: 361 KVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMIT 540
KV+ V G K +PYL T+DGRTIRYPDP+IK ND+I++D+ T KI+DFIKF+ GN+ M+T
Sbjct: 125 KVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVT 184
Query: 541 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 720
GGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++SLP+GKGI
Sbjct: 185 GGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGI 244
Query: 721 RLTXAEERDKR 753
+L+ EE+ KR
Sbjct: 245 KLSIIEEQRKR 255
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 615 HQGLHGTHLRHEVE---QRVHNRQGHEGVHFAAAREGHSPYHXRGAGQAH 755
H G G H+RH ++ +H E + +++ GH PY R A Q H
Sbjct: 325 HHGHTGHHIRHFLQLGWDYLHLTYKQEAANLGSSQNGHFPYRWRRASQYH 374
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 133 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 32
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>12_02_1215 + 27070164-27070302,27070308-27071098
Length = 309
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -3
Query: 738 LGXGKANALPARQRNVRLRALADYEHVVQPRGEGVSRG---VLDVHNVEGAGMSLAGHDG 568
+ KA A AR+R ++ +A + G+ + G V+ V + G G L G G
Sbjct: 1 MATAKAGARGARRRRLKATGMAMAAGMAMVAGKEPAAGAKMVVVVPSCGGNGAVLLGGGG 60
Query: 567 AHTPQVTASRDHTQVPRLKL 508
PQ+ ASR + R +L
Sbjct: 61 GSVPQIRASRPDLEGGRRQL 80
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 668 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 546
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 680 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 585
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 680 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 585
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 146 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 18
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 30 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 194
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 566 APSCPARDI--PAPSTLCTSRTPRDTPSP 646
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 647 VAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPD 516
V KV PV+SL C + C+S + + PVI+ + D
Sbjct: 165 VLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYID 208
>04_04_0040 + 22322839-22324173
Length = 444
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +3
Query: 588 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHFAAAREGHSPYHXRGAG 746
TSRL LR H H HG + RH++ +R R H A G + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 283 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 387
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,166,459
Number of Sequences: 37544
Number of extensions: 575160
Number of successful extensions: 1959
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1957
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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