Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0331
(730 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.83
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.83
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.83
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.83
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 23 1.9
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 23 1.9
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 23 1.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.4
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 4.4
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 5.8
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 5.8
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 7.7
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 7.7
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.83
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 457 KYFIYLFIYIYACNTFDRS*FLSFIRFLTLSRAFVA 564
+YFIY+F+ ++ C F F+S + L + VA
Sbjct: 295 RYFIYMFVSVWKCLLF----FVSVLFILLVKEGEVA 326
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.83
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 457 KYFIYLFIYIYACNTFDRS*FLSFIRFLTLSRAFVA 564
+YFIY+F+ ++ C F F+S + L + VA
Sbjct: 295 RYFIYMFVSVWKCLLF----FVSVLFILLVKEGEVA 326
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.83
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 457 KYFIYLFIYIYACNTFDRS*FLSFIRFLTLSRAFVA 564
+YFIY+F+ ++ C F F+S + L + VA
Sbjct: 295 RYFIYMFVSVWKCLLF----FVSVLFILLVKEGEVA 326
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.83
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 457 KYFIYLFIYIYACNTFDRS*FLSFIRFLTLSRAFVA 564
+YFIY+F+ ++ C F F+S + L + VA
Sbjct: 295 RYFIYMFVSVWKCLLF----FVSVLFILLVKEGEVA 326
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 168 GDWGLQLSPINEEFLVSASHK 230
G G+Q+SP NE +V++S++
Sbjct: 52 GFGGVQISPPNENLVVTSSNR 72
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 168 GDWGLQLSPINEEFLVSASHK 230
G G+Q+SP NE +V++S++
Sbjct: 53 GFGGVQISPPNENLVVTSSNR 73
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 168 GDWGLQLSPINEEFLVSASHK 230
G G+Q+SP NE +V++S++
Sbjct: 53 GFGGVQISPPNENLVVTSSNR 73
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 390 TTFTSSK*SSLVNFPTTPTAVKPPRV 313
TT T+++ + N+PT T + PP V
Sbjct: 1067 TTSTTTR-PTTTNWPTQGTTIPPPAV 1091
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/59 (20%), Positives = 25/59 (42%)
Frame = +1
Query: 433 CVVLCVICKYFIYLFIYIYACNTFDRS*FLSFIRFLTLSRAFVATILNLTADIIYLILL 609
CV++ ++C IY F Y + T + F + F + T +++L+ +
Sbjct: 230 CVLIILLC---IYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCI 285
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.8 bits (44), Expect = 5.8
Identities = 12/58 (20%), Positives = 24/58 (41%)
Frame = +1
Query: 427 LTCVVLCVICKYFIYLFIYIYACNTFDRS*FLSFIRFLTLSRAFVATILNLTADIIYL 600
+TC + VI + + ++ CN +I TLS+ ++ A ++ L
Sbjct: 134 ITCELFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAFVVVL 191
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 90 TRATLKESACSPWP 131
TR TLK + SP+P
Sbjct: 256 TRTTLKNNRASPYP 269
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 448 VICKYFIYLFIYIYACNTFDRS*FLSFIRFLTLSRAFVATIL 573
V C YFIYLF Y + + ++F L F +T +
Sbjct: 146 VFC-YFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCI 186
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -3
Query: 434 HVNDPSAGSPTETXXXXXXXLNDQVWS 354
HV+ S SPT N +WS
Sbjct: 194 HVSTGSTSSPTIASATYTNSANSSIWS 220
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,257
Number of Sequences: 336
Number of extensions: 3326
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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